RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 LARGE2Q8N3Y3 721 aa21.29■■□□□ 1
PDLIM7-210ENST00000503827 U2SURPO15042 1029 aaKnown RBP21.28■■□□□ 1
PDLIM7-210ENST00000503827 SNRPA1P09661 255 aaKnown RBP21.28■■□□□ 1
PDLIM7-210ENST00000503827 GRIPAP1Q4V328 841 aa21.28■■□□□ 1
PDLIM7-210ENST00000503827 DGKZQ13574 1117 aa21.27■■□□□ 1
PDLIM7-210ENST00000503827 SAPCD2Q86UD0 394 aa21.27■■□□□ 1
PDLIM7-210ENST00000503827 PRAMEF22A3QJZ6 481 aa21.26■□□□□ 0.99
PDLIM7-210ENST00000503827 BRPF1P55201 1214 aaPredicted RBP21.26■□□□□ 0.99
PDLIM7-210ENST00000503827 CRY2Q49AN0 593 aa21.26■□□□□ 0.99
PDLIM7-210ENST00000503827 NYXQ9GZU5 481 aa21.26■□□□□ 0.99
PDLIM7-210ENST00000503827 CELF2O95319 508 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-210ENST00000503827 NIM1KQ8IY84 436 aa21.25■□□□□ 0.99
PDLIM7-210ENST00000503827 RPGRQ92834 1020 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-210ENST00000503827 HHIPL1Q96JK4 782 aa21.25■□□□□ 0.99
PDLIM7-210ENST00000503827 ADARB2Q9NS39 739 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-210ENST00000503827 HLFQ16534 295 aa21.24■□□□□ 0.99
PDLIM7-210ENST00000503827 NUP98P52948 1817 aa21.24■□□□□ 0.99
PDLIM7-210ENST00000503827 NBPF26B4DH59 902 aa21.23■□□□□ 0.99
PDLIM7-210ENST00000503827 NBPF10Q6P3W6 841 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-210ENST00000503827 NBPF15Q8N660 670 aa21.23■□□□□ 0.99
PDLIM7-210ENST00000503827 PDE4DIPQ5VU43 2346 aa21.22■□□□□ 0.99
PDLIM7-210ENST00000503827 COL3A1P02461 1466 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-210ENST00000503827 GPRC5DQ9NZD1 345 aa21.22■□□□□ 0.99
PDLIM7-210ENST00000503827 TNRC18O15417 2968 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-210ENST00000503827 ABCC12Q96J65 1359 aa21.22■□□□□ 0.99
PDLIM7-210ENST00000503827 HOXA10P31260 410 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-210ENST00000503827 CC2D1BQ5T0F9 858 aaKnown RBP21.21■□□□□ 0.99
PDLIM7-210ENST00000503827 CIAPIN1Q6FI81 312 aa21.21■□□□□ 0.99
PDLIM7-210ENST00000503827 NUTM1Q86Y26 1132 aa21.21■□□□□ 0.99
PDLIM7-210ENST00000503827 PPIP5K2O43314 1243 aa21.2■□□□□ 0.98
PDLIM7-210ENST00000503827 PPEF1O14829 653 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-210ENST00000503827 RBM17Q96I25 401 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-210ENST00000503827 GLIS2Q9BZE0 524 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-210ENST00000503827 TMX4Q9H1E5 349 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-210ENST00000503827 ZNF408Q9H9D4 720 aa21.19■□□□□ 0.98
PDLIM7-210ENST00000503827 KIF7Q2M1P5 1343 aa21.19■□□□□ 0.98
PDLIM7-210ENST00000503827 LAMB4A4D0S4 1761 aa21.18■□□□□ 0.98
PDLIM7-210ENST00000503827 TCERG1O14776 1098 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-210ENST00000503827 NOGQ13253 232 aa21.18■□□□□ 0.98
PDLIM7-210ENST00000503827 RTF1Q92541 710 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-210ENST00000503827 PHACTR3Q96KR7 559 aa21.18■□□□□ 0.98
PDLIM7-210ENST00000503827 CRAMP1Q96RY5 1269 aa21.18■□□□□ 0.98
PDLIM7-210ENST00000503827 VPS33BQ9H267 617 aa21.18■□□□□ 0.98
PDLIM7-210ENST00000503827 RIC1Q4ADV7 1423 aa21.18■□□□□ 0.98
PDLIM7-210ENST00000503827 PRKAR2BP31323 418 aa21.17■□□□□ 0.98
PDLIM7-210ENST00000503827 PGAP2Q9UHJ9 254 aa21.17■□□□□ 0.98
PDLIM7-210ENST00000503827 NPC1L1Q9UHC9 1359 aa21.17■□□□□ 0.98
PDLIM7-210ENST00000503827 CLSPNQ9HAW4 1339 aa21.16■□□□□ 0.98
PDLIM7-210ENST00000503827 ERVV-1B6SEH8 477 aa21.16■□□□□ 0.98
PDLIM7-210ENST00000503827 AOC3Q16853 763 aa21.16■□□□□ 0.98
PDLIM7-210ENST00000503827 ZC3H15Q8WU90 426 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-210ENST00000503827 ZNRF3Q9ULT6 936 aa21.16■□□□□ 0.98
PDLIM7-210ENST00000503827 PER1O15534 1290 aaPredicted RBP21.15■□□□□ 0.98
PDLIM7-210ENST00000503827 GMPSP49915 693 aaPredicted RBP21.15■□□□□ 0.98
PDLIM7-210ENST00000503827 CXCL9Q07325 125 aa21.15■□□□□ 0.98
PDLIM7-210ENST00000503827 CDC37L1Q7L3B6 337 aa21.15■□□□□ 0.98
PDLIM7-210ENST00000503827 MCM10Q7L590 875 aa21.15■□□□□ 0.98
PDLIM7-210ENST00000503827 NGEFQ8N5V2 710 aa21.15■□□□□ 0.98
PDLIM7-210ENST00000503827 IBTKQ9P2D0 1353 aaPredicted RBP21.14■□□□□ 0.98
PDLIM7-210ENST00000503827 CDHR2Q9BYE9 1310 aa21.14■□□□□ 0.97
PDLIM7-210ENST00000503827 SUPT20HQ8NEM7 779 aa21.14■□□□□ 0.97
PDLIM7-210ENST00000503827 MAP3K15Q6ZN16 1313 aa21.13■□□□□ 0.97
PDLIM7-210ENST00000503827 BCL2L13Q9BXK5 485 aa21.13■□□□□ 0.97
PDLIM7-210ENST00000503827 RSPH6AQ9H0K4 717 aa21.13■□□□□ 0.97
PDLIM7-210ENST00000503827 AKAP11Q9UKA4 1901 aa21.13■□□□□ 0.97
PDLIM7-210ENST00000503827 GPTP24298 496 aa21.12■□□□□ 0.97
PDLIM7-210ENST00000503827 SOX10P56693 466 aa21.12■□□□□ 0.97
PDLIM7-210ENST00000503827 KIF6Q6ZMV9 814 aa21.12■□□□□ 0.97
PDLIM7-210ENST00000503827 SLC51AQ86UW1 340 aa21.12■□□□□ 0.97
PDLIM7-210ENST00000503827 HUNKP57058 714 aa21.11■□□□□ 0.97
PDLIM7-210ENST00000503827 TNIP1Q15025 636 aa21.11■□□□□ 0.97
PDLIM7-210ENST00000503827 SUSD4Q5VX71 490 aa21.11■□□□□ 0.97
PDLIM7-210ENST00000503827 ZIC5Q96T25 663 aa21.11■□□□□ 0.97
PDLIM7-210ENST00000503827 ATP6V0A2Q9Y487 856 aa21.11■□□□□ 0.97
PDLIM7-210ENST00000503827 UBN2Q6ZU65 1347 aa21.1■□□□□ 0.97
PDLIM7-210ENST00000503827 HIRAP54198 1017 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-210ENST00000503827 CNGB1Q14028 1251 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-210ENST00000503827 SAGE1Q9NXZ1 904 aa21.1■□□□□ 0.97
PDLIM7-210ENST00000503827 TAF7Q15545 349 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-210ENST00000503827 PRPF38BQ5VTL8 546 aaKnown RBP21.09■□□□□ 0.97
PDLIM7-210ENST00000503827 NLRP3Q96P20 1036 aa21.09■□□□□ 0.97
PDLIM7-210ENST00000503827 RTFDC1Q9BY42 306 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-210ENST00000503827 TRIM26Q12899 539 aaPredicted RBP21.08■□□□□ 0.97
PDLIM7-210ENST00000503827 DCTN1Q14203 1278 aa21.08■□□□□ 0.97
PDLIM7-210ENST00000503827 RGMBQ6NW40 437 aa21.08■□□□□ 0.97
PDLIM7-210ENST00000503827 PPP1R42Q7Z4L9 355 aa21.08■□□□□ 0.97
PDLIM7-210ENST00000503827 TRPM4Q8TD43 1214 aa21.08■□□□□ 0.97
PDLIM7-210ENST00000503827 CFAP53Q96M91 514 aa21.08■□□□□ 0.97
PDLIM7-210ENST00000503827 CNOT7Q9UIV1 285 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-210ENST00000503827 RRP7AQ9Y3A4 280 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-210ENST00000503827 POLR2AP24928 1970 aaKnown RBP21.08■□□□□ 0.96
PDLIM7-210ENST00000503827 H7C1D1 291 aa21.07■□□□□ 0.96
PDLIM7-210ENST00000503827 HTATSF1O43719 755 aaKnown RBP21.07■□□□□ 0.96
PDLIM7-210ENST00000503827 RAD17O75943 681 aa21.07■□□□□ 0.96
PDLIM7-210ENST00000503827 NTSR2O95665 410 aa21.07■□□□□ 0.96
PDLIM7-210ENST00000503827 DPP8Q6V1X1 898 aaPredicted RBP21.07■□□□□ 0.96
PDLIM7-210ENST00000503827 TTLL7Q6ZT98 887 aa21.07■□□□□ 0.96
PDLIM7-210ENST00000503827 USP48Q86UV5 1035 aa21.07■□□□□ 0.96
PDLIM7-210ENST00000503827 ZBTB3Q9H5J0 574 aa21.07■□□□□ 0.96
PDLIM7-210ENST00000503827 NUDCQ9Y266 331 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms