RNA–Protein interactions for RNA: ENST00000503534.5

CLPTM1L-204, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-204ENST00000503534 DIAPH1O60610 1272 aaKnown RBP13.12□□□□□ -0.31
CLPTM1L-204ENST00000503534 SOX10P56693 466 aa13.12□□□□□ -0.31
CLPTM1L-204ENST00000503534 GAS2L2Q8NHY3 880 aa13.12□□□□□ -0.31
CLPTM1L-204ENST00000503534 TMX4Q9H1E5 349 aaPredicted RBP13.12□□□□□ -0.31
CLPTM1L-204ENST00000503534 ZNF408Q9H9D4 720 aa13.12□□□□□ -0.31
CLPTM1L-204ENST00000503534 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
CLPTM1L-204ENST00000503534 IL17REQ8NFR9 667 aa13.11□□□□□ -0.31
CLPTM1L-204ENST00000503534 RPGRQ92834 1020 aaKnown RBP13.11□□□□□ -0.31
CLPTM1L-204ENST00000503534 NYXQ9GZU5 481 aa13.11□□□□□ -0.31
CLPTM1L-204ENST00000503534 GPRC5DQ9NZD1 345 aa13.11□□□□□ -0.31
CLPTM1L-204ENST00000503534 COL4A5P29400 1685 aa13.1□□□□□ -0.31
CLPTM1L-204ENST00000503534 PIP4K2AP48426 406 aaPredicted RBP13.1□□□□□ -0.31
CLPTM1L-204ENST00000503534 GLIS2Q9BZE0 524 aaPredicted RBP13.1□□□□□ -0.31
CLPTM1L-204ENST00000503534 USP16Q9Y5T5 823 aa13.1□□□□□ -0.31
CLPTM1L-204ENST00000503534 SNED1Q8TER0 1413 aa13.1□□□□□ -0.31
CLPTM1L-204ENST00000503534 PPIP5K2O43314 1243 aa13.09□□□□□ -0.31
CLPTM1L-204ENST00000503534 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
CLPTM1L-204ENST00000503534 VPS33BQ9H267 617 aa13.09□□□□□ -0.31
CLPTM1L-204ENST00000503534 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
CLPTM1L-204ENST00000503534 SNRPA1P09661 255 aaKnown RBP13.08□□□□□ -0.32
CLPTM1L-204ENST00000503534 HUNKP57058 714 aa13.08□□□□□ -0.32
CLPTM1L-204ENST00000503534 CDC37L1Q7L3B6 337 aa13.08□□□□□ -0.32
CLPTM1L-204ENST00000503534 ZC3H15Q8WU90 426 aaKnown RBP13.08□□□□□ -0.32
CLPTM1L-204ENST00000503534 RBM17Q96I25 401 aaKnown RBP13.08□□□□□ -0.32
CLPTM1L-204ENST00000503534 BCL2L13Q9BXK5 485 aa13.08□□□□□ -0.32
CLPTM1L-204ENST00000503534 CDHR2Q9BYE9 1310 aa13.08□□□□□ -0.32
CLPTM1L-204ENST00000503534 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
CLPTM1L-204ENST00000503534 SUPT20HQ8NEM7 779 aa13.07□□□□□ -0.32
CLPTM1L-204ENST00000503534 GCC1Q96CN9 775 aa13.07□□□□□ -0.32
CLPTM1L-204ENST00000503534 PGAP2Q9UHJ9 254 aa13.07□□□□□ -0.32
CLPTM1L-204ENST00000503534 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
CLPTM1L-204ENST00000503534 AKAP11Q9UKA4 1901 aa13.06□□□□□ -0.32
CLPTM1L-204ENST00000503534 TCERG1O14776 1098 aaKnown RBP13.06□□□□□ -0.32
CLPTM1L-204ENST00000503534 U2SURPO15042 1029 aaKnown RBP13.06□□□□□ -0.32
CLPTM1L-204ENST00000503534 HOXA10P31260 410 aaPredicted RBP13.06□□□□□ -0.32
CLPTM1L-204ENST00000503534 EIF4G2P78344 907 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLPTM1L-204ENST00000503534 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
CLPTM1L-204ENST00000503534 ZNRF3Q9ULT6 936 aa13.06□□□□□ -0.32
CLPTM1L-204ENST00000503534 TIMELESSQ9UNS1 1208 aa13.06□□□□□ -0.32
CLPTM1L-204ENST00000503534 CEMIPQ8WUJ3 1361 aa13.06□□□□□ -0.32
CLPTM1L-204ENST00000503534 KCNQ3O43525 872 aa13.05□□□□□ -0.32
CLPTM1L-204ENST00000503534 GMPSP49915 693 aaPredicted RBP13.05□□□□□ -0.32
CLPTM1L-204ENST00000503534 TNIP1Q15025 636 aa13.05□□□□□ -0.32
CLPTM1L-204ENST00000503534 AOC3Q16853 763 aa13.05□□□□□ -0.32
CLPTM1L-204ENST00000503534 RGMBQ6NW40 437 aa13.05□□□□□ -0.32
CLPTM1L-204ENST00000503534 NUTM1Q86Y26 1132 aa13.05□□□□□ -0.32
CLPTM1L-204ENST00000503534 CCDC102AQ96A19 550 aa13.05□□□□□ -0.32
CLPTM1L-204ENST00000503534 CRAMP1Q96RY5 1269 aa13.05□□□□□ -0.32
CLPTM1L-204ENST00000503534 KIF7Q2M1P5 1343 aa13.05□□□□□ -0.32
CLPTM1L-204ENST00000503534 RIC1Q4ADV7 1423 aa13.05□□□□□ -0.32
CLPTM1L-204ENST00000503534 TRPA1O75762 1119 aa13.04□□□□□ -0.32
CLPTM1L-204ENST00000503534 CXCL9Q07325 125 aa13.04□□□□□ -0.32
CLPTM1L-204ENST00000503534 HLFQ16534 295 aa13.04□□□□□ -0.32
CLPTM1L-204ENST00000503534 CTU1Q7Z7A3 348 aaKnown RBP13.04□□□□□ -0.32
CLPTM1L-204ENST00000503534 ZIC5Q96T25 663 aa13.04□□□□□ -0.32
CLPTM1L-204ENST00000503534 ABCC12Q96J65 1359 aa13.04□□□□□ -0.32
CLPTM1L-204ENST00000503534 NUP98P52948 1817 aa13.04□□□□□ -0.32
CLPTM1L-204ENST00000503534 PRAMEF22A3QJZ6 481 aa13.03□□□□□ -0.32
CLPTM1L-204ENST00000503534 H7C1D1 291 aa13.03□□□□□ -0.32
CLPTM1L-204ENST00000503534 KIF23Q02241 960 aaPredicted RBP13.03□□□□□ -0.32
CLPTM1L-204ENST00000503534 USP48Q86UV5 1035 aa13.03□□□□□ -0.32
CLPTM1L-204ENST00000503534 C2orf69Q8N8R5 385 aa13.03□□□□□ -0.32
CLPTM1L-204ENST00000503534 RTF1Q92541 710 aaKnown RBP13.03□□□□□ -0.32
CLPTM1L-204ENST00000503534 NBPF26B4DH59 902 aa13.02□□□□□ -0.33
CLPTM1L-204ENST00000503534 ERVV-1B6SEH8 477 aa13.02□□□□□ -0.33
CLPTM1L-204ENST00000503534 ZNF157P51786 506 aaPredicted RBP13.02□□□□□ -0.33
CLPTM1L-204ENST00000503534 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
CLPTM1L-204ENST00000503534 NBPF10Q6P3W6 841 aaKnown RBP13.02□□□□□ -0.33
CLPTM1L-204ENST00000503534 RNF186Q9NXI6 227 aa13.02□□□□□ -0.33
CLPTM1L-204ENST00000503534 IBTKQ9P2D0 1353 aaPredicted RBP13.02□□□□□ -0.33
CLPTM1L-204ENST00000503534 FAM155AB1AL88 458 aaPredicted RBP13.01□□□□□ -0.33
CLPTM1L-204ENST00000503534 HSPA5P11021 654 aaKnown RBP13.01□□□□□ -0.33
CLPTM1L-204ENST00000503534 HIRAP54198 1017 aaPredicted RBP13.01□□□□□ -0.33
CLPTM1L-204ENST00000503534 KIF6Q6ZMV9 814 aa13.01□□□□□ -0.33
CLPTM1L-204ENST00000503534 GBA2Q9HCG7 927 aaPredicted RBP13.01□□□□□ -0.33
CLPTM1L-204ENST00000503534 CNOT7Q9UIV1 285 aaKnown RBP13.01□□□□□ -0.33
CLPTM1L-204ENST00000503534 ATP6V0A2Q9Y487 856 aa13.01□□□□□ -0.33
CLPTM1L-204ENST00000503534 LAMB4A4D0S4 1761 aa13.01□□□□□ -0.33
CLPTM1L-204ENST00000503534 PKN2Q16513 984 aaKnown RBP13□□□□□ -0.33
CLPTM1L-204ENST00000503534 DPP8Q6V1X1 898 aaPredicted RBP13□□□□□ -0.33
CLPTM1L-204ENST00000503534 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
CLPTM1L-204ENST00000503534 NGEFQ8N5V2 710 aa13□□□□□ -0.33
CLPTM1L-204ENST00000503534 TRPM4Q8TD43 1214 aa13□□□□□ -0.33
CLPTM1L-204ENST00000503534 NLRP3Q96P20 1036 aa13□□□□□ -0.33
CLPTM1L-204ENST00000503534 MAP3K15Q6ZN16 1313 aa12.99□□□□□ -0.33
CLPTM1L-204ENST00000503534 RAD17O75943 681 aa12.99□□□□□ -0.33
CLPTM1L-204ENST00000503534 GPTP24298 496 aa12.99□□□□□ -0.33
CLPTM1L-204ENST00000503534 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
CLPTM1L-204ENST00000503534 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
CLPTM1L-204ENST00000503534 DCPSQ96C86 337 aaKnown RBP12.99□□□□□ -0.33
CLPTM1L-204ENST00000503534 RTFDC1Q9BY42 306 aaPredicted RBP12.99□□□□□ -0.33
CLPTM1L-204ENST00000503534 HDAC9Q9UKV0 1011 aa12.99□□□□□ -0.33
CLPTM1L-204ENST00000503534 HPS5Q9UPZ3 1129 aa12.99□□□□□ -0.33
CLPTM1L-204ENST00000503534 KIAA2012Q0VF49 1180 aa12.98□□□□□ -0.33
CLPTM1L-204ENST00000503534 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
CLPTM1L-204ENST00000503534 MPNDQ8N594 471 aa12.98□□□□□ -0.33
CLPTM1L-204ENST00000503534 SLC10A3P09131 477 aa12.97□□□□□ -0.33
CLPTM1L-204ENST00000503534 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
CLPTM1L-204ENST00000503534 CC2D1BQ5T0F9 858 aaKnown RBP12.97□□□□□ -0.33
CLPTM1L-204ENST00000503534 SUSD4Q5VX71 490 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms