RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
RNF4-203ENST00000503123 TSPYL6Q8N831 410 aa11.32□□□□□ -0.6
RNF4-203ENST00000503123 ZNF622Q969S3 477 aaKnown RBP eCLIP11.32□□□□□ -0.6
RNF4-203ENST00000503123 ZC3H4Q9UPT8 1303 aaKnown RBP11.32□□□□□ -0.6
RNF4-203ENST00000503123 LRRC37AA6NMS7 1700 aa11.32□□□□□ -0.6
RNF4-203ENST00000503123 TRIM28Q13263 835 aaKnown RBP11.31□□□□□ -0.6
RNF4-203ENST00000503123 ERFEQ4G0M1 354 aa11.31□□□□□ -0.6
RNF4-203ENST00000503123 SLC10A5Q5PT55 438 aa11.31□□□□□ -0.6
RNF4-203ENST00000503123 PRPF40BQ6NWY9 871 aaKnown RBP11.31□□□□□ -0.6
RNF4-203ENST00000503123 NLRP10Q86W26 655 aa11.31□□□□□ -0.6
RNF4-203ENST00000503123 UTP14AQ9BVJ6 771 aaKnown RBP11.31□□□□□ -0.6
RNF4-203ENST00000503123 STK31Q9BXU1 1019 aa11.31□□□□□ -0.6
RNF4-203ENST00000503123 MYH16Q9H6N6 1097 aa11.31□□□□□ -0.6
RNF4-203ENST00000503123 LTBP3Q9NS15 1303 aa11.31□□□□□ -0.6
RNF4-203ENST00000503123 FAM177BA6PVY3 158 aa11.3□□□□□ -0.6
RNF4-203ENST00000503123 DDX58O95786 925 aaKnown RBP11.3□□□□□ -0.6
RNF4-203ENST00000503123 ALDH1B1P30837 517 aa11.3□□□□□ -0.6
RNF4-203ENST00000503123 HOXA10P31260 410 aaPredicted RBP11.3□□□□□ -0.6
RNF4-203ENST00000503123 GOLGA2Q08379 1002 aa11.3□□□□□ -0.6
RNF4-203ENST00000503123 NUTM1Q86Y26 1132 aa11.3□□□□□ -0.6
RNF4-203ENST00000503123 ISCA1Q9BUE6 129 aa11.3□□□□□ -0.6
RNF4-203ENST00000503123 SENP3-EIF4A1A0A087X0R7 540 aa11.29□□□□□ -0.6
RNF4-203ENST00000503123 C7orf43Q8WVR3 580 aa11.29□□□□□ -0.6
RNF4-203ENST00000503123 PHAXQ9H814 394 aaKnown RBP11.29□□□□□ -0.6
RNF4-203ENST00000503123 SALL2Q9Y467 1007 aaPredicted RBP11.29□□□□□ -0.6
RNF4-203ENST00000503123 SCN4AP35499 1836 aa11.29□□□□□ -0.6
RNF4-203ENST00000503123 SPEF2Q9C093 1822 aa11.29□□□□□ -0.6
RNF4-203ENST00000503123 SH3TC1Q8TE82 1336 aa11.29□□□□□ -0.6
RNF4-203ENST00000503123 VAMP4O75379 141 aa11.28□□□□□ -0.6
RNF4-203ENST00000503123 LMNB1P20700 586 aa11.28□□□□□ -0.6
RNF4-203ENST00000503123 DIEXFQ68CQ4 756 aaKnown RBP11.28□□□□□ -0.6
RNF4-203ENST00000503123 RIC3Q7Z5B4 369 aa11.28□□□□□ -0.6
RNF4-203ENST00000503123 RPGRQ92834 1020 aaKnown RBP11.28□□□□□ -0.6
RNF4-203ENST00000503123 NLRP3Q96P20 1036 aa11.28□□□□□ -0.6
RNF4-203ENST00000503123 CRAMP1Q96RY5 1269 aa11.28□□□□□ -0.6
RNF4-203ENST00000503123 SPINK5Q9NQ38 1064 aaPredicted RBP11.28□□□□□ -0.6
RNF4-203ENST00000503123 TRMT112Q9UI30 125 aaKnown RBP11.28□□□□□ -0.6
RNF4-203ENST00000503123 SNED1Q8TER0 1413 aa11.27□□□□□ -0.6
RNF4-203ENST00000503123 WDR90Q96KV7 1748 aa11.27□□□□□ -0.61
RNF4-203ENST00000503123 NFKBIEO00221 500 aa11.27□□□□□ -0.61
RNF4-203ENST00000503123 C21orf2O43822 256 aa11.27□□□□□ -0.61
RNF4-203ENST00000503123 EXOSC9Q06265 439 aaKnown RBP11.27□□□□□ -0.61
RNF4-203ENST00000503123 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.61
RNF4-203ENST00000503123 C9orf131Q5VYM1 1079 aa11.27□□□□□ -0.61
RNF4-203ENST00000503123 CC2D2BQ6DHV5 1058 aa11.27□□□□□ -0.61
RNF4-203ENST00000503123 KSR2Q6VAB6 950 aa11.27□□□□□ -0.61
RNF4-203ENST00000503123 CCDC191Q8NCU4 936 aa11.27□□□□□ -0.61
RNF4-203ENST00000503123 METTL22Q9BUU2 404 aaPredicted RBP11.27□□□□□ -0.61
RNF4-203ENST00000503123 LTBP1Q14766 1721 aa11.26□□□□□ -0.61
RNF4-203ENST00000503123 E9PSI1 815 aa11.26□□□□□ -0.61
RNF4-203ENST00000503123 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
RNF4-203ENST00000503123 HSP90B1P14625 803 aaKnown RBP11.26□□□□□ -0.61
RNF4-203ENST00000503123 CCDC93Q567U6 631 aa11.26□□□□□ -0.61
RNF4-203ENST00000503123 RBM17Q96I25 401 aaKnown RBP11.26□□□□□ -0.61
RNF4-203ENST00000503123 TAOK3Q9H2K8 898 aa11.26□□□□□ -0.61
RNF4-203ENST00000503123 RNF181Q9P0P0 153 aa11.26□□□□□ -0.61
RNF4-203ENST00000503123 ATP5J2-PTCD1G3V325 749 aa11.25□□□□□ -0.61
RNF4-203ENST00000503123 RASSF7Q02833 373 aa11.25□□□□□ -0.61
RNF4-203ENST00000503123 RTKN2Q8IZC4 609 aa11.25□□□□□ -0.61
RNF4-203ENST00000503123 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
RNF4-203ENST00000503123 GPBP1L1Q9HC44 474 aaPredicted RBP11.25□□□□□ -0.61
RNF4-203ENST00000503123 MAP3K2Q9Y2U5 619 aa11.25□□□□□ -0.61
RNF4-203ENST00000503123 PSME4Q14997 1843 aa11.25□□□□□ -0.61
RNF4-203ENST00000503123 PI4KAP2A4QPH2 592 aa11.24□□□□□ -0.61
RNF4-203ENST00000503123 HCLS1P14317 486 aaPredicted RBP11.24□□□□□ -0.61
RNF4-203ENST00000503123 NEXNQ0ZGT2 675 aa11.24□□□□□ -0.61
RNF4-203ENST00000503123 FLIIQ13045 1269 aa11.24□□□□□ -0.61
RNF4-203ENST00000503123 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
RNF4-203ENST00000503123 PI4KAP1Q8N8J0 262 aa11.24□□□□□ -0.61
RNF4-203ENST00000503123 ZNF428Q96B54 188 aa11.24□□□□□ -0.61
RNF4-203ENST00000503123 PSMD1Q99460 953 aa11.24□□□□□ -0.61
RNF4-203ENST00000503123 MYD88Q99836 296 aa11.24□□□□□ -0.61
RNF4-203ENST00000503123 CWC25Q9NXE8 425 aaPredicted RBP11.24□□□□□ -0.61
RNF4-203ENST00000503123 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
RNF4-203ENST00000503123 BBOX1O75936 387 aa11.23□□□□□ -0.61
RNF4-203ENST00000503123 PCCAP05165 728 aaPredicted RBP11.23□□□□□ -0.61
RNF4-203ENST00000503123 PRELPP51888 382 aa11.23□□□□□ -0.61
RNF4-203ENST00000503123 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
RNF4-203ENST00000503123 SLFN5Q08AF3 891 aa11.23□□□□□ -0.61
RNF4-203ENST00000503123 SF3B3Q15393 1217 aaKnown RBP11.23□□□□□ -0.61
RNF4-203ENST00000503123 G2E3Q7L622 706 aa11.23□□□□□ -0.61
RNF4-203ENST00000503123 TMC4Q7Z404 712 aa11.23□□□□□ -0.61
RNF4-203ENST00000503123 SYNE4Q8N205 404 aa11.23□□□□□ -0.61
RNF4-203ENST00000503123 FAM89AQ96GI7 184 aa11.23□□□□□ -0.61
RNF4-203ENST00000503123 ZNF219Q9P2Y4 722 aaPredicted RBP11.23□□□□□ -0.61
RNF4-203ENST00000503123 KDM2BQ8NHM5 1336 aa11.23□□□□□ -0.61
RNF4-203ENST00000503123 CDHR2Q9BYE9 1310 aa11.23□□□□□ -0.61
RNF4-203ENST00000503123 IRS4O14654 1257 aaPredicted RBP11.22□□□□□ -0.61
RNF4-203ENST00000503123 PPEF1O14829 653 aaPredicted RBP11.22□□□□□ -0.61
RNF4-203ENST00000503123 ABCC4O15439 1325 aa11.22□□□□□ -0.61
RNF4-203ENST00000503123 FKBP5Q13451 457 aaPredicted RBP11.22□□□□□ -0.61
RNF4-203ENST00000503123 DDX46Q7L014 1031 aaKnown RBP11.22□□□□□ -0.61
RNF4-203ENST00000503123 TRMT2AQ8IZ69 625 aaKnown RBP11.22□□□□□ -0.61
RNF4-203ENST00000503123 ATP6V0A2Q9Y487 856 aa11.22□□□□□ -0.61
RNF4-203ENST00000503123 TCERG1O14776 1098 aaKnown RBP11.21□□□□□ -0.61
RNF4-203ENST00000503123 IGKV5-2P06315 115 aa11.21□□□□□ -0.61
RNF4-203ENST00000503123 CT47B1P0C2W7 299 aaPredicted RBP11.21□□□□□ -0.61
RNF4-203ENST00000503123 GRAPQ13588 217 aa11.21□□□□□ -0.61
RNF4-203ENST00000503123 MIER1Q8N108 512 aa11.21□□□□□ -0.61
RNF4-203ENST00000503123 LINS1Q8NG48 757 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms