RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 NBPF26B4DH59 902 aa14.09□□□□□ -0.15
USP46-204ENST00000503060 DDIT3P35638 169 aa14.09□□□□□ -0.15
USP46-204ENST00000503060 NBPF14Q5TI25 921 aa14.09□□□□□ -0.15
USP46-204ENST00000503060 NBPF10Q6P3W6 841 aaKnown RBP14.09□□□□□ -0.15
USP46-204ENST00000503060 NBPF15Q8N660 670 aa14.09□□□□□ -0.15
USP46-204ENST00000503060 PLBD2Q8NHP8 589 aa14.09□□□□□ -0.15
USP46-204ENST00000503060 BTG4Q9NY30 223 aa14.09□□□□□ -0.15
USP46-204ENST00000503060 TNS2Q63HR2 1409 aa14.08□□□□□ -0.15
USP46-204ENST00000503060 ARFGEF2Q9Y6D5 1785 aa14.08□□□□□ -0.15
USP46-204ENST00000503060 KDM4AO75164 1064 aa14.08□□□□□ -0.16
USP46-204ENST00000503060 CLASRPQ8N2M8 674 aaKnown RBP14.08□□□□□ -0.16
USP46-204ENST00000503060 TTC41PQ6P2S7 1318 aa14.08□□□□□ -0.16
USP46-204ENST00000503060 ROBO1Q9Y6N7 1651 aa14.08□□□□□ -0.16
USP46-204ENST00000503060 TOGARAM1Q9Y4F4 1720 aa14.07□□□□□ -0.16
USP46-204ENST00000503060 GTF2E1P29083 439 aaPredicted RBP14.07□□□□□ -0.16
USP46-204ENST00000503060 COL14A1Q05707 1796 aaKnown RBP14.07□□□□□ -0.16
USP46-204ENST00000503060 AHDC1Q5TGY3 1603 aaPredicted RBP14.07□□□□□ -0.16
USP46-204ENST00000503060 G3BP1Q13283 466 aaKnown RBP eCLIP14.06□□□□□ -0.16
USP46-204ENST00000503060 EPHA10Q5JZY3 1008 aa14.06□□□□□ -0.16
USP46-204ENST00000503060 AFDNP55196 1824 aaKnown RBP14.06□□□□□ -0.16
USP46-204ENST00000503060 PTCD1O75127 700 aaKnown RBP14.06□□□□□ -0.16
USP46-204ENST00000503060 GLRX3O76003 335 aaKnown RBP14.06□□□□□ -0.16
USP46-204ENST00000503060 MAP4K4O95819 1239 aaPredicted RBP14.06□□□□□ -0.16
USP46-204ENST00000503060 CIZ1Q9ULV3 898 aaPredicted RBP14.06□□□□□ -0.16
USP46-204ENST00000503060 COL15A1P39059 1388 aa14.06□□□□□ -0.16
USP46-204ENST00000503060 SASH1O94885 1247 aa14.05□□□□□ -0.16
USP46-204ENST00000503060 CNTROBQ8N137 903 aa14.05□□□□□ -0.16
USP46-204ENST00000503060 COL22A1Q8NFW1 1626 aaPredicted RBP14.05□□□□□ -0.16
USP46-204ENST00000503060 ATP5J2-PTCD1G3V325 749 aa14.05□□□□□ -0.16
USP46-204ENST00000503060 A1BGP04217 495 aa14.05□□□□□ -0.16
USP46-204ENST00000503060 IFIT2P09913 472 aaKnown RBP14.05□□□□□ -0.16
USP46-204ENST00000503060 ECHDC1Q9NTX5 307 aa14.05□□□□□ -0.16
USP46-204ENST00000503060 TMOD3Q9NYL9 352 aa14.05□□□□□ -0.16
USP46-204ENST00000503060 DISP2A7MBM2 1401 aa14.05□□□□□ -0.16
USP46-204ENST00000503060 AK9Q5TCS8 1911 aa14.04□□□□□ -0.16
USP46-204ENST00000503060 HSP90AA1P07900 732 aaKnown RBP14.04□□□□□ -0.16
USP46-204ENST00000503060 TTLL7Q6ZT98 887 aa14.04□□□□□ -0.16
USP46-204ENST00000503060 UBE3BQ7Z3V4 1068 aa14.04□□□□□ -0.16
USP46-204ENST00000503060 JARID2Q92833 1246 aaPredicted RBP14.04□□□□□ -0.16
USP46-204ENST00000503060 GPATCH3Q96I76 525 aa14.04□□□□□ -0.16
USP46-204ENST00000503060 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
USP46-204ENST00000503060 A0A087WZG4 1122 aa14.04□□□□□ -0.16
USP46-204ENST00000503060 FAM193AP78312 1265 aa14.04□□□□□ -0.16
USP46-204ENST00000503060 AACSQ86V21 672 aa14.04□□□□□ -0.16
USP46-204ENST00000503060 COL16A1Q07092 1604 aaPredicted RBP14.03□□□□□ -0.16
USP46-204ENST00000503060 CASP7P55210 303 aa14.03□□□□□ -0.16
USP46-204ENST00000503060 NUP188Q5SRE5 1749 aa14.03□□□□□ -0.16
USP46-204ENST00000503060 EPB41L2O43491 1005 aaKnown RBP14.03□□□□□ -0.16
USP46-204ENST00000503060 ST18O60284 1047 aa14.03□□□□□ -0.16
USP46-204ENST00000503060 RABL6Q3YEC7 729 aaPredicted RBP14.03□□□□□ -0.16
USP46-204ENST00000503060 SIL1Q9H173 461 aa14.03□□□□□ -0.16
USP46-204ENST00000503060 COPRSQ9NQ92 184 aa14.03□□□□□ -0.16
USP46-204ENST00000503060 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
USP46-204ENST00000503060 RFX5P48382 616 aaPredicted RBP14.02□□□□□ -0.16
USP46-204ENST00000503060 GSE1Q14687 1217 aa14.02□□□□□ -0.16
USP46-204ENST00000503060 KLHDC4Q8TBB5 520 aa14.02□□□□□ -0.16
USP46-204ENST00000503060 EAF2Q96CJ1 260 aaPredicted RBP14.02□□□□□ -0.16
USP46-204ENST00000503060 IL25Q9H293 177 aa14.02□□□□□ -0.16
USP46-204ENST00000503060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.02□□□□□ -0.16
USP46-204ENST00000503060 H7C1W4 665 aa14.01□□□□□ -0.17
USP46-204ENST00000503060 SGSM2O43147 1006 aa14.01□□□□□ -0.17
USP46-204ENST00000503060 MCM4P33991 863 aa14.01□□□□□ -0.17
USP46-204ENST00000503060 PIGBQ92521 554 aa14.01□□□□□ -0.17
USP46-204ENST00000503060 LTBP4Q8N2S1 1624 aa14.01□□□□□ -0.17
USP46-204ENST00000503060 IL17RAQ96F46 866 aa14.01□□□□□ -0.17
USP46-204ENST00000503060 CWC25Q9NXE8 425 aaPredicted RBP14.01□□□□□ -0.17
USP46-204ENST00000503060 PALD1Q9ULE6 856 aa14.01□□□□□ -0.17
USP46-204ENST00000503060 PLCH1Q4KWH8 1693 aa14□□□□□ -0.17
USP46-204ENST00000503060 PTPN12Q05209 780 aaKnown RBP14□□□□□ -0.17
USP46-204ENST00000503060 CCDC8Q9H0W5 538 aaPredicted RBP14□□□□□ -0.17
USP46-204ENST00000503060 ASAP1Q9ULH1 1129 aa14□□□□□ -0.17
USP46-204ENST00000503060 RAB3GAP1Q15042 981 aa14□□□□□ -0.17
USP46-204ENST00000503060 TEX13AQ9BXU3 409 aaPredicted RBP14□□□□□ -0.17
USP46-204ENST00000503060 ZBTB3Q9H5J0 574 aa14□□□□□ -0.17
USP46-204ENST00000503060 ATG3Q9NT62 314 aa14□□□□□ -0.17
USP46-204ENST00000503060 TJP1Q07157 1748 aa13.99□□□□□ -0.17
USP46-204ENST00000503060 DNAJC10Q8IXB1 793 aa13.99□□□□□ -0.17
USP46-204ENST00000503060 CCDC191Q8NCU4 936 aa13.99□□□□□ -0.17
USP46-204ENST00000503060 EVI5LQ96CN4 794 aa13.99□□□□□ -0.17
USP46-204ENST00000503060 TLR7Q9NYK1 1049 aaKnown RBP13.99□□□□□ -0.17
USP46-204ENST00000503060 ITGB4P16144 1822 aa13.98□□□□□ -0.17
USP46-204ENST00000503060 LRP6O75581 1613 aa13.98□□□□□ -0.17
USP46-204ENST00000503060 HSPA4P34932 840 aa13.98□□□□□ -0.17
USP46-204ENST00000503060 NEK4P51957 841 aa13.98□□□□□ -0.17
USP46-204ENST00000503060 FOXO4P98177 505 aa13.98□□□□□ -0.17
USP46-204ENST00000503060 LMBR1LQ6UX01 489 aa13.98□□□□□ -0.17
USP46-204ENST00000503060 TNPO1Q92973 898 aaKnown RBP13.98□□□□□ -0.17
USP46-204ENST00000503060 LSG1Q9H089 658 aaKnown RBP13.98□□□□□ -0.17
USP46-204ENST00000503060 DIAPH3Q9NSV4 1193 aa13.98□□□□□ -0.17
USP46-204ENST00000503060 RAD50Q92878 1312 aa13.98□□□□□ -0.17
USP46-204ENST00000503060 CWC27Q6UX04 472 aaKnown RBP13.98□□□□□ -0.17
USP46-204ENST00000503060 RUFY2Q8WXA3 655 aa13.98□□□□□ -0.17
USP46-204ENST00000503060 EXOC5O00471 708 aa13.97□□□□□ -0.17
USP46-204ENST00000503060 BCL9O00512 1426 aa13.97□□□□□ -0.17
USP46-204ENST00000503060 WNK3Q9BYP7 1800 aa13.97□□□□□ -0.17
USP46-204ENST00000503060 MCM2P49736 904 aa13.96□□□□□ -0.17
USP46-204ENST00000503060 ISCA1Q9BUE6 129 aa13.96□□□□□ -0.17
USP46-204ENST00000503060 STARD3NLO95772 234 aa13.96□□□□□ -0.17
USP46-204ENST00000503060 TFCP2Q12800 502 aa13.96□□□□□ -0.17
USP46-204ENST00000503060 TNNI3KQ59H18 835 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms