RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
NR1I3-216ENST00000502848 CCNL1Q9UK58 526 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-216ENST00000502848 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
NR1I3-216ENST00000502848 PNMA6EA0A0J9YXQ4 647 aa11.25□□□□□ -0.61
NR1I3-216ENST00000502848 SRGAP3O43295 1099 aa11.25□□□□□ -0.61
NR1I3-216ENST00000502848 EIF5BO60841 1220 aaKnown RBP11.25□□□□□ -0.61
NR1I3-216ENST00000502848 CAMTA2O94983 1202 aa11.25□□□□□ -0.61
NR1I3-216ENST00000502848 PPP1R42Q7Z4L9 355 aa11.25□□□□□ -0.61
NR1I3-216ENST00000502848 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-216ENST00000502848 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
NR1I3-216ENST00000502848 C4BP0C0L5 1744 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 TAF1LQ8IZX4 1826 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 DSG3P32926 999 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 ANKRD45Q5TZF3 282 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 UBE3BQ7Z3V4 1068 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 NLRP10Q86W26 655 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 ZNF34Q8IZ26 560 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 LINC00116Q8NCU8 138 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 LRRCC1Q9C099 1032 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 AOX1Q06278 1338 aa11.24□□□□□ -0.61
NR1I3-216ENST00000502848 BMP2KLQ5H9B9 411 aa11.23□□□□□ -0.61
NR1I3-216ENST00000502848 KIF1BPQ96EK5 621 aa11.23□□□□□ -0.61
NR1I3-216ENST00000502848 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
NR1I3-216ENST00000502848 BICC1Q9H694 974 aaKnown RBP11.23□□□□□ -0.61
NR1I3-216ENST00000502848 COPRSQ9NQ92 184 aa11.23□□□□□ -0.61
NR1I3-216ENST00000502848 ATP5J2-PTCD1G3V325 749 aa11.22□□□□□ -0.61
NR1I3-216ENST00000502848 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
NR1I3-216ENST00000502848 MYH14Q7Z406 1995 aaKnown RBP11.22□□□□□ -0.61
NR1I3-216ENST00000502848 RGS17Q9UGC6 210 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-216ENST00000502848 NARFQ9UHQ1 456 aa11.22□□□□□ -0.61
NR1I3-216ENST00000502848 RTCBQ9Y3I0 505 aaKnown RBP11.22□□□□□ -0.61
NR1I3-216ENST00000502848 ZNF330Q9Y3S2 320 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-216ENST00000502848 NUP98P52948 1817 aa11.21□□□□□ -0.61
NR1I3-216ENST00000502848 RTL9Q8NET4 1388 aa11.21□□□□□ -0.61
NR1I3-216ENST00000502848 PDE4AP27815 886 aa11.21□□□□□ -0.61
NR1I3-216ENST00000502848 SSFA2P28290 1259 aa11.21□□□□□ -0.61
NR1I3-216ENST00000502848 RGS3P49796 1198 aa11.21□□□□□ -0.61
NR1I3-216ENST00000502848 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
NR1I3-216ENST00000502848 LNPKQ9C0E8 428 aa11.21□□□□□ -0.61
NR1I3-216ENST00000502848 KAT6BQ8WYB5 2073 aa11.21□□□□□ -0.62
NR1I3-216ENST00000502848 LAMB2P55268 1798 aa11.21□□□□□ -0.62
NR1I3-216ENST00000502848 RIC1Q4ADV7 1423 aa11.2□□□□□ -0.62
NR1I3-216ENST00000502848 SALL3Q9BXA9 1300 aa11.2□□□□□ -0.62
NR1I3-216ENST00000502848 USP42Q9H9J4 1324 aaKnown RBP11.2□□□□□ -0.62
NR1I3-216ENST00000502848 SURF6O75683 361 aaKnown RBP11.2□□□□□ -0.62
NR1I3-216ENST00000502848 CSF1RP07333 972 aa11.2□□□□□ -0.62
NR1I3-216ENST00000502848 FOXO4P98177 505 aa11.2□□□□□ -0.62
NR1I3-216ENST00000502848 HLFQ16534 295 aa11.2□□□□□ -0.62
NR1I3-216ENST00000502848 FAM182BQ5T319 152 aa11.2□□□□□ -0.62
NR1I3-216ENST00000502848 BACH2Q9BYV9 841 aa11.2□□□□□ -0.62
NR1I3-216ENST00000502848 STAP2Q9UGK3 403 aa11.2□□□□□ -0.62
NR1I3-216ENST00000502848 COL24A1Q17RW2 1714 aa11.2□□□□□ -0.62
NR1I3-216ENST00000502848 TNS1Q9HBL0 1735 aaKnown RBP11.2□□□□□ -0.62
NR1I3-216ENST00000502848 UBN2Q6ZU65 1347 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 GNPATO15228 680 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 PDE8AO60658 829 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 CIAO1O76071 339 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 TRIM37O94972 964 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-216ENST00000502848 POTEAQ6S8J7 498 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 PLEKHM2Q8IWE5 1019 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 FLAD1Q8NFF5 587 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 RHPN1Q8TCX5 695 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 UTP14AQ9BVJ6 771 aaKnown RBP11.19□□□□□ -0.62
NR1I3-216ENST00000502848 NYXQ9GZU5 481 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 GPR108Q9NPR9 543 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 TBC1D2BQ9UPU7 963 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
NR1I3-216ENST00000502848 TTC41PQ6P2S7 1318 aa11.18□□□□□ -0.62
NR1I3-216ENST00000502848 LRP5O75197 1615 aa11.18□□□□□ -0.62
NR1I3-216ENST00000502848 ZPR1O75312 459 aa11.18□□□□□ -0.62
NR1I3-216ENST00000502848 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
NR1I3-216ENST00000502848 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.62
NR1I3-216ENST00000502848 LMBR1LQ6UX01 489 aa11.18□□□□□ -0.62
NR1I3-216ENST00000502848 CLASRPQ8N2M8 674 aaKnown RBP11.18□□□□□ -0.62
NR1I3-216ENST00000502848 TRMT112Q9UI30 125 aaKnown RBP11.18□□□□□ -0.62
NR1I3-216ENST00000502848 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
NR1I3-216ENST00000502848 UBR3Q6ZT12 1888 aa11.17□□□□□ -0.62
NR1I3-216ENST00000502848 NTSR2O95665 410 aa11.17□□□□□ -0.62
NR1I3-216ENST00000502848 CTSWP56202 376 aa11.17□□□□□ -0.62
NR1I3-216ENST00000502848 TXNRD1Q16881 649 aa11.17□□□□□ -0.62
NR1I3-216ENST00000502848 C8orf34Q49A92 452 aa11.17□□□□□ -0.62
NR1I3-216ENST00000502848 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
NR1I3-216ENST00000502848 TICAM2Q86XR7 235 aa11.17□□□□□ -0.62
NR1I3-216ENST00000502848 GPATCH3Q96I76 525 aa11.17□□□□□ -0.62
NR1I3-216ENST00000502848 LRRC4BQ9NT99 713 aa11.17□□□□□ -0.62
NR1I3-216ENST00000502848 NIP7Q9Y221 180 aaKnown RBP eCLIP11.17□□□□□ -0.62
NR1I3-216ENST00000502848 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-216ENST00000502848 MX1P20591 662 aa11.16□□□□□ -0.62
NR1I3-216ENST00000502848 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-216ENST00000502848 PDE1AP54750 535 aa11.16□□□□□ -0.62
NR1I3-216ENST00000502848 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-216ENST00000502848 CCDC57Q2TAC2 916 aa11.16□□□□□ -0.62
NR1I3-216ENST00000502848 SLC10A5Q5PT55 438 aa11.16□□□□□ -0.62
NR1I3-216ENST00000502848 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
NR1I3-216ENST00000502848 TTC22Q5TAA0 569 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1078.8 ms