RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 ANKRD36CQ5JPF3 1778 aa16.8■□□□□ 0.28
SGCA-203ENST00000502555 BCORQ6W2J9 1755 aa16.8■□□□□ 0.28
SGCA-203ENST00000502555 RABL6Q3YEC7 729 aaPredicted RBP16.79■□□□□ 0.28
SGCA-203ENST00000502555 PARP10Q53GL7 1025 aa16.79■□□□□ 0.28
SGCA-203ENST00000502555 BICC1Q9H694 974 aaKnown RBP16.79■□□□□ 0.28
SGCA-203ENST00000502555 NARFQ9UHQ1 456 aa16.79■□□□□ 0.28
SGCA-203ENST00000502555 SCN7AQ01118 1682 aa16.79■□□□□ 0.28
SGCA-203ENST00000502555 GPTP24298 496 aa16.78■□□□□ 0.28
SGCA-203ENST00000502555 CHD1LQ86WJ1 897 aa16.78■□□□□ 0.28
SGCA-203ENST00000502555 PROM2Q8N271 834 aa16.78■□□□□ 0.28
SGCA-203ENST00000502555 CDHR2Q9BYE9 1310 aa16.78■□□□□ 0.28
SGCA-203ENST00000502555 UBN2Q6ZU65 1347 aa16.77■□□□□ 0.27
SGCA-203ENST00000502555 ZPR1O75312 459 aa16.76■□□□□ 0.27
SGCA-203ENST00000502555 SSFA2P28290 1259 aa16.76■□□□□ 0.27
SGCA-203ENST00000502555 HSP90AB4PQ58FF6 505 aa16.76■□□□□ 0.27
SGCA-203ENST00000502555 TRAPPC3LQ5T215 181 aa16.76■□□□□ 0.27
SGCA-203ENST00000502555 ANKRD45Q5TZF3 282 aa16.76■□□□□ 0.27
SGCA-203ENST00000502555 PLA2G12BQ9BX93 195 aa16.76■□□□□ 0.27
SGCA-203ENST00000502555 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
SGCA-203ENST00000502555 USP42Q9H9J4 1324 aaKnown RBP16.76■□□□□ 0.27
SGCA-203ENST00000502555 NUP98P52948 1817 aa16.76■□□□□ 0.27
SGCA-203ENST00000502555 RAB11FIP3O75154 756 aa16.75■□□□□ 0.27
SGCA-203ENST00000502555 RFC4P35249 363 aa16.75■□□□□ 0.27
SGCA-203ENST00000502555 EPHA10Q5JZY3 1008 aa16.75■□□□□ 0.27
SGCA-203ENST00000502555 ARHGEF1Q92888 912 aaKnown RBP16.75■□□□□ 0.27
SGCA-203ENST00000502555 NIP7Q9Y221 180 aaKnown RBP eCLIP16.75■□□□□ 0.27
SGCA-203ENST00000502555 NOP58Q9Y2X3 529 aaKnown RBP16.75■□□□□ 0.27
SGCA-203ENST00000502555 HSP90B1P14625 803 aaKnown RBP16.74■□□□□ 0.27
SGCA-203ENST00000502555 FOXO4P98177 505 aa16.74■□□□□ 0.27
SGCA-203ENST00000502555 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
SGCA-203ENST00000502555 AMIGO3Q86WK7 504 aa16.74■□□□□ 0.27
SGCA-203ENST00000502555 JARID2Q92833 1246 aaPredicted RBP16.74■□□□□ 0.27
SGCA-203ENST00000502555 UTP14AQ9BVJ6 771 aaKnown RBP16.74■□□□□ 0.27
SGCA-203ENST00000502555 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
SGCA-203ENST00000502555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.73■□□□□ 0.27
SGCA-203ENST00000502555 RGS3P49796 1198 aa16.73■□□□□ 0.27
SGCA-203ENST00000502555 SKAP1Q86WV1 359 aa16.73■□□□□ 0.27
SGCA-203ENST00000502555 FAM89AQ96GI7 184 aa16.73■□□□□ 0.27
SGCA-203ENST00000502555 LNPKQ9C0E8 428 aa16.73■□□□□ 0.27
SGCA-203ENST00000502555 BCL2L12Q9HB09 334 aa16.73■□□□□ 0.27
SGCA-203ENST00000502555 EXOC6BQ9Y2D4 811 aa16.73■□□□□ 0.27
SGCA-203ENST00000502555 SH3TC1Q8TE82 1336 aa16.73■□□□□ 0.27
SGCA-203ENST00000502555 SURF6O75683 361 aaKnown RBP16.72■□□□□ 0.27
SGCA-203ENST00000502555 PHF14O94880 888 aa16.72■□□□□ 0.27
SGCA-203ENST00000502555 SUSD4Q5VX71 490 aa16.72■□□□□ 0.27
SGCA-203ENST00000502555 LMBR1LQ6UX01 489 aa16.72■□□□□ 0.27
SGCA-203ENST00000502555 LRRCC1Q9C099 1032 aa16.72■□□□□ 0.27
SGCA-203ENST00000502555 SRP68Q9UHB9 627 aaKnown RBP16.72■□□□□ 0.27
SGCA-203ENST00000502555 C4AP0C0L4 1744 aa16.72■□□□□ 0.27
SGCA-203ENST00000502555 UBR3Q6ZT12 1888 aa16.72■□□□□ 0.27
SGCA-203ENST00000502555 IRS4O14654 1257 aaPredicted RBP16.71■□□□□ 0.27
SGCA-203ENST00000502555 NTSR2O95665 410 aa16.71■□□□□ 0.27
SGCA-203ENST00000502555 PDE4AP27815 886 aa16.71■□□□□ 0.27
SGCA-203ENST00000502555 SF3B2Q13435 895 aaKnown RBP16.71■□□□□ 0.27
SGCA-203ENST00000502555 RTL5Q5HYW3 569 aaPredicted RBP16.71■□□□□ 0.27
SGCA-203ENST00000502555 ERC1Q8IUD2 1116 aa16.71■□□□□ 0.27
SGCA-203ENST00000502555 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
SGCA-203ENST00000502555 RFX5P48382 616 aaPredicted RBP16.7■□□□□ 0.26
SGCA-203ENST00000502555 SMIM5Q71RC9 77 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 FLAD1Q8NFF5 587 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 KIF1BPQ96EK5 621 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 CAMKK2Q96RR4 588 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 COPRSQ9NQ92 184 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 PDE8AO60658 829 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 CSF1RP07333 972 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 BAG6P46379 1132 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 CTSWP56202 376 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 ZNF827Q17R98 1081 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 TBC1D9BQ66K14 1250 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 SETDB2Q96T68 719 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 NYXQ9GZU5 481 aa16.7■□□□□ 0.26
SGCA-203ENST00000502555 OS9Q13438 667 aaPredicted RBP16.69■□□□□ 0.26
SGCA-203ENST00000502555 COL24A1Q17RW2 1714 aa16.69■□□□□ 0.26
SGCA-203ENST00000502555 RHPN1Q8TCX5 695 aa16.69■□□□□ 0.26
SGCA-203ENST00000502555 EP400Q96L91 3159 aa16.69■□□□□ 0.26
SGCA-203ENST00000502555 TFCP2L1Q9NZI6 479 aa16.69■□□□□ 0.26
SGCA-203ENST00000502555 CHMP3Q9Y3E7 222 aa16.69■□□□□ 0.26
SGCA-203ENST00000502555 CARMIL3Q8ND23 1372 aa16.68■□□□□ 0.26
SGCA-203ENST00000502555 APBB1O00213 710 aa16.68■□□□□ 0.26
SGCA-203ENST00000502555 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
SGCA-203ENST00000502555 G3BP1Q13283 466 aaKnown RBP eCLIP16.68■□□□□ 0.26
SGCA-203ENST00000502555 PA2G4Q9UQ80 394 aaKnown RBP16.68■□□□□ 0.26
SGCA-203ENST00000502555 EN1Q05925 392 aaPredicted RBP16.67■□□□□ 0.26
SGCA-203ENST00000502555 CCDC125Q86Z20 511 aa16.67■□□□□ 0.26
SGCA-203ENST00000502555 SYNE4Q8N205 404 aa16.67■□□□□ 0.26
SGCA-203ENST00000502555 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
SGCA-203ENST00000502555 RTL9Q8NET4 1388 aa16.66■□□□□ 0.26
SGCA-203ENST00000502555 SMARCA5O60264 1052 aaPredicted RBP16.66■□□□□ 0.26
SGCA-203ENST00000502555 GYS1P13807 737 aa16.66■□□□□ 0.26
SGCA-203ENST00000502555 EZH2Q15910 746 aaKnown RBP16.66■□□□□ 0.26
SGCA-203ENST00000502555 CCDC57Q2TAC2 916 aa16.66■□□□□ 0.26
SGCA-203ENST00000502555 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
SGCA-203ENST00000502555 BICDL1Q6ZP65 573 aa16.66■□□□□ 0.26
SGCA-203ENST00000502555 TTLL11Q8NHH1 800 aa16.66■□□□□ 0.26
SGCA-203ENST00000502555 LAMB2P55268 1798 aa16.65■□□□□ 0.26
SGCA-203ENST00000502555 FAM177BA6PVY3 158 aa16.65■□□□□ 0.26
SGCA-203ENST00000502555 CIAO1O76071 339 aa16.65■□□□□ 0.26
SGCA-203ENST00000502555 IFIT5Q13325 482 aaKnown RBP16.65■□□□□ 0.26
SGCA-203ENST00000502555 NFIXQ14938 502 aa16.65■□□□□ 0.26
SGCA-203ENST00000502555 SLC10A5Q5PT55 438 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms