RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 SLC10A5Q5PT55 438 aa33.02■■■□□ 2.88
PROM1-202ENST00000502501 FAM177BA6PVY3 158 aa33.01■■■□□ 2.87
PROM1-202ENST00000502501 DDX58O95786 925 aaKnown RBP33.01■■■□□ 2.87
PROM1-202ENST00000502501 NUTM1Q86Y26 1132 aa33.01■■■□□ 2.87
PROM1-202ENST00000502501 PHAXQ9H814 394 aaKnown RBP33.01■■■□□ 2.87
PROM1-202ENST00000502501 VAMP4O75379 141 aa33■■■□□ 2.87
PROM1-202ENST00000502501 EXOSC9Q06265 439 aaKnown RBP33■■■□□ 2.87
PROM1-202ENST00000502501 ZNF622Q969S3 477 aaKnown RBP eCLIP33■■■□□ 2.87
PROM1-202ENST00000502501 ARHGAP27Q6ZUM4 889 aa32.99■■■□□ 2.87
PROM1-202ENST00000502501 E9PSI1 815 aa32.98■■■□□ 2.87
PROM1-202ENST00000502501 HOXA10P31260 410 aaPredicted RBP32.97■■■□□ 2.87
PROM1-202ENST00000502501 SOGA3Q5TF21 947 aa32.97■■■□□ 2.87
PROM1-202ENST00000502501 RIC3Q7Z5B4 369 aa32.97■■■□□ 2.87
PROM1-202ENST00000502501 MIER1Q8N108 512 aa32.97■■■□□ 2.87
PROM1-202ENST00000502501 SLX4Q8IY92 1834 aa32.97■■■□□ 2.87
PROM1-202ENST00000502501 PRPF40BQ6NWY9 871 aaKnown RBP32.96■■■□□ 2.87
PROM1-202ENST00000502501 ZNF784Q8NCA9 323 aaPredicted RBP32.96■■■□□ 2.87
PROM1-202ENST00000502501 FER1L6Q2WGJ9 1857 aa32.96■■■□□ 2.87
PROM1-202ENST00000502501 SH3TC1Q8TE82 1336 aa32.96■■■□□ 2.87
PROM1-202ENST00000502501 ALDH1B1P30837 517 aa32.95■■■□□ 2.87
PROM1-202ENST00000502501 LAMB2P55268 1798 aa32.95■■■□□ 2.87
PROM1-202ENST00000502501 CACNA1SQ13698 1873 aa32.95■■■□□ 2.86
PROM1-202ENST00000502501 SBF1O95248 1867 aa32.94■■■□□ 2.86
PROM1-202ENST00000502501 SLC4A2P04920 1241 aa32.93■■■□□ 2.86
PROM1-202ENST00000502501 KSR2Q6VAB6 950 aa32.93■■■□□ 2.86
PROM1-202ENST00000502501 TRMT112Q9UI30 125 aaKnown RBP32.93■■■□□ 2.86
PROM1-202ENST00000502501 C7orf43Q8WVR3 580 aa32.92■■■□□ 2.86
PROM1-202ENST00000502501 NLRP3Q96P20 1036 aa32.92■■■□□ 2.86
PROM1-202ENST00000502501 METTL22Q9BUU2 404 aaPredicted RBP32.92■■■□□ 2.86
PROM1-202ENST00000502501 LTBP3Q9NS15 1303 aa32.92■■■□□ 2.86
PROM1-202ENST00000502501 DDX60Q8IY21 1712 aaKnown RBP32.91■■■□□ 2.86
PROM1-202ENST00000502501 ZC3H4Q9UPT8 1303 aaKnown RBP32.91■■■□□ 2.86
PROM1-202ENST00000502501 SLFN5Q08AF3 891 aa32.9■■■□□ 2.86
PROM1-202ENST00000502501 CCDC191Q8NCU4 936 aa32.9■■■□□ 2.86
PROM1-202ENST00000502501 FLIIQ13045 1269 aa32.89■■■□□ 2.86
PROM1-202ENST00000502501 RPGRQ92834 1020 aaKnown RBP32.89■■■□□ 2.86
PROM1-202ENST00000502501 CRAMP1Q96RY5 1269 aa32.89■■■□□ 2.86
PROM1-202ENST00000502501 ATP5J2-PTCD1G3V325 749 aa32.88■■■□□ 2.85
PROM1-202ENST00000502501 PI4KAP2A4QPH2 592 aa32.87■■■□□ 2.85
PROM1-202ENST00000502501 NFKBIEO00221 500 aa32.87■■■□□ 2.85
PROM1-202ENST00000502501 C21orf2O43822 256 aa32.87■■■□□ 2.85
PROM1-202ENST00000502501 TRMT2AQ8IZ69 625 aaKnown RBP32.87■■■□□ 2.85
PROM1-202ENST00000502501 PI4KAP1Q8N8J0 262 aa32.87■■■□□ 2.85
PROM1-202ENST00000502501 ZNF428Q96B54 188 aa32.87■■■□□ 2.85
PROM1-202ENST00000502501 MAP3K2Q9Y2U5 619 aa32.87■■■□□ 2.85
PROM1-202ENST00000502501 G2E3Q7L622 706 aa32.86■■■□□ 2.85
PROM1-202ENST00000502501 RBM17Q96I25 401 aaKnown RBP32.86■■■□□ 2.85
PROM1-202ENST00000502501 SNED1Q8TER0 1413 aa32.85■■■□□ 2.85
PROM1-202ENST00000502501 HSP90B1P14625 803 aaKnown RBP32.85■■■□□ 2.85
PROM1-202ENST00000502501 LMNB1P20700 586 aa32.85■■■□□ 2.85
PROM1-202ENST00000502501 C3orf67Q6ZVT6 689 aa32.85■■■□□ 2.85
PROM1-202ENST00000502501 ZBTB38Q8NAP3 1195 aaPredicted RBP32.85■■■□□ 2.85
PROM1-202ENST00000502501 MYD88Q99836 296 aa32.85■■■□□ 2.85
PROM1-202ENST00000502501 TCERG1O14776 1098 aaKnown RBP32.84■■■□□ 2.85
PROM1-202ENST00000502501 GRIPAP1Q4V328 841 aa32.84■■■□□ 2.85
PROM1-202ENST00000502501 CCDC93Q567U6 631 aa32.84■■■□□ 2.85
PROM1-202ENST00000502501 C9orf131Q5VYM1 1079 aa32.84■■■□□ 2.85
PROM1-202ENST00000502501 CC2D2BQ6DHV5 1058 aa32.84■■■□□ 2.85
PROM1-202ENST00000502501 CWC25Q9NXE8 425 aaPredicted RBP32.84■■■□□ 2.85
PROM1-202ENST00000502501 NEXNQ0ZGT2 675 aa32.83■■■□□ 2.85
PROM1-202ENST00000502501 TAOK3Q9H2K8 898 aa32.82■■■□□ 2.84
PROM1-202ENST00000502501 DICER1Q9UPY3 1922 aaKnown RBP32.82■■■□□ 2.84
PROM1-202ENST00000502501 PCCAP05165 728 aaPredicted RBP32.81■■■□□ 2.84
PROM1-202ENST00000502501 HCLS1P14317 486 aaPredicted RBP32.81■■■□□ 2.84
PROM1-202ENST00000502501 RASSF7Q02833 373 aa32.81■■■□□ 2.84
PROM1-202ENST00000502501 FAM89AQ96GI7 184 aa32.81■■■□□ 2.84
PROM1-202ENST00000502501 TIAM2Q8IVF5 1701 aa32.8■■■□□ 2.84
PROM1-202ENST00000502501 IGKV5-2P06315 115 aa32.8■■■□□ 2.84
PROM1-202ENST00000502501 CT47B1P0C2W7 299 aaPredicted RBP32.8■■■□□ 2.84
PROM1-202ENST00000502501 FKBP5Q13451 457 aaPredicted RBP32.8■■■□□ 2.84
PROM1-202ENST00000502501 SF3B3Q15393 1217 aaKnown RBP32.8■■■□□ 2.84
PROM1-202ENST00000502501 RTKN2Q8IZC4 609 aa32.8■■■□□ 2.84
PROM1-202ENST00000502501 SYNE4Q8N205 404 aa32.8■■■□□ 2.84
PROM1-202ENST00000502501 RNF181Q9P0P0 153 aa32.8■■■□□ 2.84
PROM1-202ENST00000502501 CDHR2Q9BYE9 1310 aa32.78■■■□□ 2.84
PROM1-202ENST00000502501 PRELPP51888 382 aa32.78■■■□□ 2.84
PROM1-202ENST00000502501 DNAAF4Q8WXU2 420 aa32.78■■■□□ 2.84
PROM1-202ENST00000502501 ABCC4O15439 1325 aa32.77■■■□□ 2.84
PROM1-202ENST00000502501 IRS4O14654 1257 aaPredicted RBP32.77■■■□□ 2.84
PROM1-202ENST00000502501 CCDC88AQ3V6T2 1871 aa32.76■■■□□ 2.84
PROM1-202ENST00000502501 NEURL1BA8MQ27 555 aa32.76■■■□□ 2.83
PROM1-202ENST00000502501 TMC4Q7Z404 712 aa32.76■■■□□ 2.83
PROM1-202ENST00000502501 CDCA7LQ96GN5 454 aa32.76■■■□□ 2.83
PROM1-202ENST00000502501 PPEF1O14829 653 aaPredicted RBP32.75■■■□□ 2.83
PROM1-202ENST00000502501 BBOX1O75936 387 aa32.75■■■□□ 2.83
PROM1-202ENST00000502501 FKBP4Q02790 459 aaKnown RBP eCLIP32.75■■■□□ 2.83
PROM1-202ENST00000502501 LINS1Q8NG48 757 aa32.75■■■□□ 2.83
PROM1-202ENST00000502501 PSMD1Q99460 953 aa32.75■■■□□ 2.83
PROM1-202ENST00000502501 ZNF219Q9P2Y4 722 aaPredicted RBP32.75■■■□□ 2.83
PROM1-202ENST00000502501 LRRC37AA6NMS7 1700 aa32.74■■■□□ 2.83
PROM1-202ENST00000502501 DDX46Q7L014 1031 aaKnown RBP32.74■■■□□ 2.83
PROM1-202ENST00000502501 GPBP1L1Q9HC44 474 aaPredicted RBP32.73■■■□□ 2.83
PROM1-202ENST00000502501 ATP6V0A2Q9Y487 856 aa32.73■■■□□ 2.83
PROM1-202ENST00000502501 GRAPQ13588 217 aa32.72■■■□□ 2.83
PROM1-202ENST00000502501 ALDH1L2Q3SY69 923 aa32.72■■■□□ 2.83
PROM1-202ENST00000502501 GRAPLQ8TC17 118 aaPredicted RBP32.72■■■□□ 2.83
PROM1-202ENST00000502501 CWF19L2Q2TBE0 894 aaKnown RBP32.7■■■□□ 2.83
PROM1-202ENST00000502501 MYH3P11055 1940 aa32.69■■■□□ 2.82
PROM1-202ENST00000502501 PDE8AO60658 829 aa32.69■■■□□ 2.82
PROM1-202ENST00000502501 GCKRQ14397 625 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms