RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 RPGRQ92834 1020 aaKnown RBP25.72■■□□□ 1.71
SFXN1-203ENST00000502393 HSP90AB3PQ58FF7 597 aa25.71■■□□□ 1.71
SFXN1-203ENST00000502393 OLFM4Q6UX06 510 aa25.71■■□□□ 1.71
SFXN1-203ENST00000502393 XAGE3Q8WTP9 111 aa25.71■■□□□ 1.71
SFXN1-203ENST00000502393 AIMP1Q12904 312 aaKnown RBP25.7■■□□□ 1.7
SFXN1-203ENST00000502393 UTP14AQ9BVJ6 771 aaKnown RBP25.7■■□□□ 1.7
SFXN1-203ENST00000502393 ZEB1P37275 1124 aaPredicted RBP25.69■■□□□ 1.7
SFXN1-203ENST00000502393 CC2D2BQ6DHV5 1058 aa25.69■■□□□ 1.7
SFXN1-203ENST00000502393 DNAJC5GQ8N7S2 189 aa25.69■■□□□ 1.7
SFXN1-203ENST00000502393 RBM17Q96I25 401 aaKnown RBP25.69■■□□□ 1.7
SFXN1-203ENST00000502393 ZNF277Q9NRM2 450 aaPredicted RBP25.69■■□□□ 1.7
SFXN1-203ENST00000502393 RNF123Q5XPI4 1314 aa25.68■■□□□ 1.7
SFXN1-203ENST00000502393 APAF1O14727 1248 aa25.68■■□□□ 1.7
SFXN1-203ENST00000502393 SLC10A5Q5PT55 438 aa25.68■■□□□ 1.7
SFXN1-203ENST00000502393 HDGFL1Q5TGJ6 251 aa25.68■■□□□ 1.7
SFXN1-203ENST00000502393 NLRP3Q96P20 1036 aa25.68■■□□□ 1.7
SFXN1-203ENST00000502393 CRAMP1Q96RY5 1269 aa25.68■■□□□ 1.7
SFXN1-203ENST00000502393 CHPF2Q9P2E5 772 aa25.68■■□□□ 1.7
SFXN1-203ENST00000502393 DDNO94850 711 aaPredicted RBP25.67■■□□□ 1.7
SFXN1-203ENST00000502393 GRIPAP1Q4V328 841 aa25.67■■□□□ 1.7
SFXN1-203ENST00000502393 PSMD1Q99460 953 aa25.67■■□□□ 1.7
SFXN1-203ENST00000502393 ZNF853P0CG23 659 aa25.66■■□□□ 1.7
SFXN1-203ENST00000502393 CALD1Q05682 793 aaKnown RBP25.66■■□□□ 1.7
SFXN1-203ENST00000502393 TCIRG1Q13488 830 aa25.66■■□□□ 1.7
SFXN1-203ENST00000502393 SYNE4Q8N205 404 aa25.66■■□□□ 1.7
SFXN1-203ENST00000502393 MBIPQ9NS73 344 aa25.66■■□□□ 1.7
SFXN1-203ENST00000502393 DBF4Q9UBU7 674 aaPredicted RBP25.66■■□□□ 1.7
SFXN1-203ENST00000502393 SNED1Q8TER0 1413 aa25.65■■□□□ 1.7
SFXN1-203ENST00000502393 NLRP10Q86W26 655 aa25.65■■□□□ 1.7
SFXN1-203ENST00000502393 IARSP41252 1262 aaKnown RBP25.64■■□□□ 1.7
SFXN1-203ENST00000502393 DUSP27Q5VZP5 1158 aa25.64■■□□□ 1.7
SFXN1-203ENST00000502393 C3orf67Q6ZVT6 689 aa25.64■■□□□ 1.7
SFXN1-203ENST00000502393 IFT57Q9NWB7 429 aa25.64■■□□□ 1.7
SFXN1-203ENST00000502393 L3MBTL3Q96JM7 780 aaPredicted RBP25.63■■□□□ 1.69
SFXN1-203ENST00000502393 ANKRD36CQ5JPF3 1778 aa25.63■■□□□ 1.69
SFXN1-203ENST00000502393 IQCA1LA6NCM1 817 aa25.62■■□□□ 1.69
SFXN1-203ENST00000502393 PPEF1O14829 653 aaPredicted RBP25.62■■□□□ 1.69
SFXN1-203ENST00000502393 GNAI1P63096 354 aa25.62■■□□□ 1.69
SFXN1-203ENST00000502393 ANKRD13DQ6ZTN6 518 aa25.62■■□□□ 1.69
SFXN1-203ENST00000502393 PLBD2Q8NHP8 589 aa25.62■■□□□ 1.69
SFXN1-203ENST00000502393 HYPKQ9NX55 129 aa25.62■■□□□ 1.69
SFXN1-203ENST00000502393 FZD9O00144 591 aa25.61■■□□□ 1.69
SFXN1-203ENST00000502393 HTRA3P83110 453 aa25.61■■□□□ 1.69
SFXN1-203ENST00000502393 TRMT112Q9UI30 125 aaKnown RBP25.61■■□□□ 1.69
SFXN1-203ENST00000502393 JDP2Q8WYK2 163 aa25.6■■□□□ 1.69
SFXN1-203ENST00000502393 TMX4Q9H1E5 349 aaPredicted RBP25.59■■□□□ 1.69
SFXN1-203ENST00000502393 SH3TC1Q8TE82 1336 aa25.59■■□□□ 1.69
SFXN1-203ENST00000502393 ZNF541Q9H0D2 1346 aa25.59■■□□□ 1.69
SFXN1-203ENST00000502393 KLRG1Q96E93 195 aa25.58■■□□□ 1.69
SFXN1-203ENST00000502393 TCERG1O14776 1098 aaKnown RBP25.57■■□□□ 1.68
SFXN1-203ENST00000502393 HCLS1P14317 486 aaPredicted RBP25.57■■□□□ 1.68
SFXN1-203ENST00000502393 CHADLQ6NUI6 762 aa25.57■■□□□ 1.68
SFXN1-203ENST00000502393 ATP6V0A2Q9Y487 856 aa25.57■■□□□ 1.68
SFXN1-203ENST00000502393 ABCC4O15439 1325 aa25.57■■□□□ 1.68
SFXN1-203ENST00000502393 SCN4AP35499 1836 aa25.56■■□□□ 1.68
SFXN1-203ENST00000502393 BBOX1O75936 387 aa25.56■■□□□ 1.68
SFXN1-203ENST00000502393 ISCA1Q9BUE6 129 aa25.56■■□□□ 1.68
SFXN1-203ENST00000502393 CCDC184Q52MB2 194 aa25.55■■□□□ 1.68
SFXN1-203ENST00000502393 GPC2Q8N158 579 aa25.55■■□□□ 1.68
SFXN1-203ENST00000502393 TAF1DQ9H5J8 278 aaPredicted RBP25.55■■□□□ 1.68
SFXN1-203ENST00000502393 DDX46Q7L014 1031 aaKnown RBP25.54■■□□□ 1.68
SFXN1-203ENST00000502393 CHMP4AQ9BY43 222 aa25.54■■□□□ 1.68
SFXN1-203ENST00000502393 ELL2O00472 640 aaPredicted RBP25.53■■□□□ 1.68
SFXN1-203ENST00000502393 POTEIP0CG38 1075 aa25.53■■□□□ 1.68
SFXN1-203ENST00000502393 POTEJP0CG39 1038 aa25.53■■□□□ 1.68
SFXN1-203ENST00000502393 TRIM28Q13263 835 aaKnown RBP25.53■■□□□ 1.68
SFXN1-203ENST00000502393 LDHDQ86WU2 507 aa25.53■■□□□ 1.68
SFXN1-203ENST00000502393 LARGE2Q8N3Y3 721 aa25.53■■□□□ 1.68
SFXN1-203ENST00000502393 VPS33BQ9H267 617 aa25.53■■□□□ 1.68
SFXN1-203ENST00000502393 HACL1Q9UJ83 578 aa25.53■■□□□ 1.68
SFXN1-203ENST00000502393 EIF6P56537 245 aaKnown RBP25.52■■□□□ 1.68
SFXN1-203ENST00000502393 SLC51AQ86UW1 340 aa25.52■■□□□ 1.68
SFXN1-203ENST00000502393 SP8Q8IXZ3 490 aa25.52■■□□□ 1.68
SFXN1-203ENST00000502393 JMYQ8N9B5 988 aa25.52■■□□□ 1.68
SFXN1-203ENST00000502393 LAMB2P55268 1798 aa25.51■■□□□ 1.67
SFXN1-203ENST00000502393 ATP5J2-PTCD1G3V325 749 aa25.51■■□□□ 1.67
SFXN1-203ENST00000502393 CCDC27Q2M243 656 aa25.51■■□□□ 1.67
SFXN1-203ENST00000502393 C8orf58Q8NAV2 365 aa25.51■■□□□ 1.67
SFXN1-203ENST00000502393 ZNF316A6NFI3 1004 aaPredicted RBP25.5■■□□□ 1.67
SFXN1-203ENST00000502393 COL4A5P29400 1685 aa25.5■■□□□ 1.67
SFXN1-203ENST00000502393 EPHX2P34913 555 aa25.5■■□□□ 1.67
SFXN1-203ENST00000502393 GOLGA2Q08379 1002 aa25.5■■□□□ 1.67
SFXN1-203ENST00000502393 GRAPQ13588 217 aa25.5■■□□□ 1.67
SFXN1-203ENST00000502393 RIC3Q7Z5B4 369 aa25.5■■□□□ 1.67
SFXN1-203ENST00000502393 SUPT20HQ8NEM7 779 aa25.5■■□□□ 1.67
SFXN1-203ENST00000502393 GRAPLQ8TC17 118 aaPredicted RBP25.5■■□□□ 1.67
SFXN1-203ENST00000502393 FAM89AQ96GI7 184 aa25.5■■□□□ 1.67
SFXN1-203ENST00000502393 RTFDC1Q9BY42 306 aaPredicted RBP25.5■■□□□ 1.67
SFXN1-203ENST00000502393 TMC4Q7Z404 712 aa25.49■■□□□ 1.67
SFXN1-203ENST00000502393 PNMA8AQ86V59 439 aaPredicted RBP25.49■■□□□ 1.67
SFXN1-203ENST00000502393 ZNF428Q96B54 188 aa25.49■■□□□ 1.67
SFXN1-203ENST00000502393 PHAXQ9H814 394 aaKnown RBP25.49■■□□□ 1.67
SFXN1-203ENST00000502393 PPIP5K2O43314 1243 aa25.48■■□□□ 1.67
SFXN1-203ENST00000502393 CCDC30Q5VVM6 783 aa25.48■■□□□ 1.67
SFXN1-203ENST00000502393 DPP8Q6V1X1 898 aaPredicted RBP25.48■■□□□ 1.67
SFXN1-203ENST00000502393 NIM1KQ8IY84 436 aa25.48■■□□□ 1.67
SFXN1-203ENST00000502393 ANP32CO43423 234 aa25.47■■□□□ 1.67
SFXN1-203ENST00000502393 SF3B3Q15393 1217 aaKnown RBP25.47■■□□□ 1.67
SFXN1-203ENST00000502393 NCBP3Q53F19 620 aaKnown RBP25.47■■□□□ 1.67
SFXN1-203ENST00000502393 EAPPQ56P03 285 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms