RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 ZBTB3Q9H5J0 574 aa8.96□□□□□ -0.98
MED28-202ENST00000499786 KIF16BQ96L93 1317 aa8.96□□□□□ -0.98
MED28-202ENST00000499786 NHSL1Q5SYE7 1610 aa8.95□□□□□ -0.98
MED28-202ENST00000499786 CAMTA1Q9Y6Y1 1673 aa8.95□□□□□ -0.98
MED28-202ENST00000499786 FMNL1O95466 1100 aaPredicted RBP8.95□□□□□ -0.98
MED28-202ENST00000499786 MTMR2Q13614 643 aa8.95□□□□□ -0.98
MED28-202ENST00000499786 CSPP1Q1MSJ5 1256 aa8.95□□□□□ -0.98
MED28-202ENST00000499786 BRINP3Q76B58 766 aa8.95□□□□□ -0.98
MED28-202ENST00000499786 FAM160A2Q8N612 972 aaPredicted RBP8.95□□□□□ -0.98
MED28-202ENST00000499786 ZNF428Q96B54 188 aa8.95□□□□□ -0.98
MED28-202ENST00000499786 SPDYE5A6NIY4 337 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 PLIN1O60240 522 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 EXOSC9Q06265 439 aaKnown RBP8.94□□□□□ -0.98
MED28-202ENST00000499786 IFFO2Q5TF58 517 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 B4GALNT3Q6L9W6 998 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 RETREG3Q86VR2 466 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 ARHGEF25Q86VW2 580 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 FTSJ3Q8IY81 847 aaKnown RBP8.94□□□□□ -0.98
MED28-202ENST00000499786 EXOC6Q8TAG9 804 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 NKX2-3Q8TAU0 364 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 FRAT1Q92837 279 aaPredicted RBP8.94□□□□□ -0.98
MED28-202ENST00000499786 SMC4Q9NTJ3 1288 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 SLAIN2Q9P270 581 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 SPATA31A3Q5VYP0 1347 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 MAP3K5Q99683 1374 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 LRRC37A3O60309 1634 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 CRYBG1Q9Y4K1 1723 aa8.94□□□□□ -0.98
MED28-202ENST00000499786 HTATSF1O43719 755 aaKnown RBP8.93□□□□□ -0.98
MED28-202ENST00000499786 RARSP54136 660 aaKnown RBP8.93□□□□□ -0.98
MED28-202ENST00000499786 KCNC4Q03721 635 aa8.93□□□□□ -0.98
MED28-202ENST00000499786 PDE3AQ14432 1141 aa8.93□□□□□ -0.98
MED28-202ENST00000499786 ANKRD24Q8TF21 1146 aa8.93□□□□□ -0.98
MED28-202ENST00000499786 CRBNQ96SW2 442 aa8.93□□□□□ -0.98
MED28-202ENST00000499786 SPSB2Q99619 263 aa8.93□□□□□ -0.98
MED28-202ENST00000499786 USB1Q9BQ65 265 aaKnown RBP8.93□□□□□ -0.98
MED28-202ENST00000499786 ABCA3Q99758 1704 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 NCAPD2Q15021 1401 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 GNAT3A8MTJ3 354 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 CFAP99D6REC4 459 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 C6orf229H3BNL8 230 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 IPO8O15397 1037 aaKnown RBP8.92□□□□□ -0.98
MED28-202ENST00000499786 TLL1O43897 1013 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 BCAR3O75815 825 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 ADH1BP00325 375 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 CSB-PGBD3P0DP91 1061 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 RFC5P40937 340 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 ALDH1L2Q3SY69 923 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 MSS51Q4VC12 460 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 ZKSCAN2Q63HK3 967 aa8.92□□□□□ -0.98
MED28-202ENST00000499786 THUMPD2Q9BTF0 503 aaKnown RBP8.92□□□□□ -0.98
MED28-202ENST00000499786 CPDO75976 1380 aa8.91□□□□□ -0.98
MED28-202ENST00000499786 PLEKHG2Q9H7P9 1386 aa8.91□□□□□ -0.98
MED28-202ENST00000499786 SOS2Q07890 1332 aaPredicted RBP8.91□□□□□ -0.98
MED28-202ENST00000499786 ZC3H6P61129 1189 aaKnown RBP8.91□□□□□ -0.98
MED28-202ENST00000499786 AAMPQ13685 434 aa8.91□□□□□ -0.98
MED28-202ENST00000499786 MTHFSDQ2M296 383 aaKnown RBP8.91□□□□□ -0.98
MED28-202ENST00000499786 AMOTQ4VCS5 1084 aa8.91□□□□□ -0.98
MED28-202ENST00000499786 PLEKHO1Q53GL0 409 aaPredicted RBP8.91□□□□□ -0.98
MED28-202ENST00000499786 C1orf141Q5JVX7 400 aa8.91□□□□□ -0.98
MED28-202ENST00000499786 USHBP1Q8N6Y0 703 aa8.91□□□□□ -0.98
MED28-202ENST00000499786 DDX17Q92841 729 aaKnown RBP8.91□□□□□ -0.98
MED28-202ENST00000499786 BCL2L13Q9BXK5 485 aa8.91□□□□□ -0.98
MED28-202ENST00000499786 MBIPQ9NS73 344 aa8.91□□□□□ -0.98
MED28-202ENST00000499786 RGPD2P0DJD1 1756 aa8.91□□□□□ -0.98
MED28-202ENST00000499786 LMO7Q8WWI1 1683 aa8.91□□□□□ -0.98
MED28-202ENST00000499786 ROBO1Q9Y6N7 1651 aa8.91□□□□□ -0.98
MED28-202ENST00000499786 FAM83GA6ND36 823 aa8.9□□□□□ -0.98
MED28-202ENST00000499786 DESI1Q6ICB0 168 aa8.9□□□□□ -0.98
MED28-202ENST00000499786 MCM10Q7L590 875 aa8.9□□□□□ -0.98
MED28-202ENST00000499786 PRR7Q8TB68 274 aa8.9□□□□□ -0.98
MED28-202ENST00000499786 RAPGEF4Q8WZA2 1011 aa8.9□□□□□ -0.98
MED28-202ENST00000499786 PRDM11Q9NQV5 511 aa8.9□□□□□ -0.98
MED28-202ENST00000499786 TSPYL4Q9UJ04 414 aa8.9□□□□□ -0.98
MED28-202ENST00000499786 RGPD5Q99666 1765 aa8.9□□□□□ -0.98
MED28-202ENST00000499786 AHDC1Q5TGY3 1603 aaPredicted RBP8.9□□□□□ -0.99
MED28-202ENST00000499786 OVOS2A0A0G2JMS6 1433 aa8.89□□□□□ -0.99
MED28-202ENST00000499786 KIAA0232Q92628 1395 aa8.89□□□□□ -0.99
MED28-202ENST00000499786 NUTM2BA6NNL0 878 aaPredicted RBP8.89□□□□□ -0.99
MED28-202ENST00000499786 NUTM2EB1AL46 878 aaPredicted RBP8.89□□□□□ -0.99
MED28-202ENST00000499786 ZNF853P0CG23 659 aa8.89□□□□□ -0.99
MED28-202ENST00000499786 MMP16P51512 607 aa8.89□□□□□ -0.99
MED28-202ENST00000499786 DCTN1Q14203 1278 aa8.89□□□□□ -0.99
MED28-202ENST00000499786 TWISTNBQ3B726 338 aaPredicted RBP8.89□□□□□ -0.99
MED28-202ENST00000499786 NBPF6Q5VWK0 638 aa8.89□□□□□ -0.99
MED28-202ENST00000499786 ZNF530Q6P9A1 599 aaPredicted RBP8.89□□□□□ -0.99
MED28-202ENST00000499786 NUTM2AQ8IVF1 878 aaPredicted RBP8.89□□□□□ -0.99
MED28-202ENST00000499786 NBPF4Q96M43 638 aa8.89□□□□□ -0.99
MED28-202ENST00000499786 CHMP4BQ9H444 224 aaKnown RBP8.89□□□□□ -0.99
MED28-202ENST00000499786 NLRP2Q9NX02 1062 aa8.89□□□□□ -0.99
MED28-202ENST00000499786 PARP4Q9UKK3 1724 aaKnown RBP8.88□□□□□ -0.99
MED28-202ENST00000499786 TATP17735 454 aaPredicted RBP8.88□□□□□ -0.99
MED28-202ENST00000499786 C20orf194Q5TEA3 1177 aa8.88□□□□□ -0.99
MED28-202ENST00000499786 DZIP1LQ8IYY4 767 aaKnown RBP8.88□□□□□ -0.99
MED28-202ENST00000499786 LRRC59Q96AG4 307 aaKnown RBP8.88□□□□□ -0.99
MED28-202ENST00000499786 CHMP4AQ9BY43 222 aa8.88□□□□□ -0.99
MED28-202ENST00000499786 BABAM1Q9NWV8 329 aa8.88□□□□□ -0.99
MED28-202ENST00000499786 COL18A1P39060 1754 aa8.88□□□□□ -0.99
MED28-202ENST00000499786 CRB1P82279 1406 aa8.88□□□□□ -0.99
MED28-202ENST00000499786 LTBP4Q8N2S1 1624 aa8.87□□□□□ -0.99
MED28-202ENST00000499786 SOS1Q07889 1333 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms