RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 MYH3P11055 1940 aa24.66■■□□□ 1.54
LINC01550-201ENST00000499006 UTYO14607 1347 aa24.66■■□□□ 1.54
LINC01550-201ENST00000499006 NFIXQ14938 502 aa24.66■■□□□ 1.54
LINC01550-201ENST00000499006 PARP10Q53GL7 1025 aa24.66■■□□□ 1.54
LINC01550-201ENST00000499006 NLGN1Q8N2Q7 840 aa24.66■■□□□ 1.54
LINC01550-201ENST00000499006 LAMB2P55268 1798 aa24.66■■□□□ 1.54
LINC01550-201ENST00000499006 SOCS7O14512 581 aa24.65■■□□□ 1.54
LINC01550-201ENST00000499006 SLC16A10Q8TF71 515 aa24.65■■□□□ 1.54
LINC01550-201ENST00000499006 SETDB2Q96T68 719 aa24.65■■□□□ 1.54
LINC01550-201ENST00000499006 DDX60Q8IY21 1712 aaKnown RBP24.65■■□□□ 1.54
LINC01550-201ENST00000499006 SUSD4Q5VX71 490 aa24.64■■□□□ 1.54
LINC01550-201ENST00000499006 BICDL1Q6ZP65 573 aa24.64■■□□□ 1.54
LINC01550-201ENST00000499006 MEIS3Q99687 375 aa24.64■■□□□ 1.54
LINC01550-201ENST00000499006 GRM8O00222 908 aa24.64■■□□□ 1.53
LINC01550-201ENST00000499006 EXOC6Q8TAG9 804 aa24.64■■□□□ 1.53
LINC01550-201ENST00000499006 CARMIL3Q8ND23 1372 aa24.63■■□□□ 1.53
LINC01550-201ENST00000499006 H7C1W4 665 aa24.63■■□□□ 1.53
LINC01550-201ENST00000499006 CASP7P55210 303 aa24.63■■□□□ 1.53
LINC01550-201ENST00000499006 C9orf78Q9NZ63 289 aaPredicted RBP24.63■■□□□ 1.53
LINC01550-201ENST00000499006 NTSR2O95665 410 aa24.62■■□□□ 1.53
LINC01550-201ENST00000499006 NEFLP07196 543 aa24.62■■□□□ 1.53
LINC01550-201ENST00000499006 NBPF7P0C2Y1 421 aaPredicted RBP24.62■■□□□ 1.53
LINC01550-201ENST00000499006 PPP1R42Q7Z4L9 355 aa24.62■■□□□ 1.53
LINC01550-201ENST00000499006 ZBTB38Q8NAP3 1195 aaPredicted RBP24.62■■□□□ 1.53
LINC01550-201ENST00000499006 ZBTB40Q9NUA8 1239 aa24.62■■□□□ 1.53
LINC01550-201ENST00000499006 PCCAP05165 728 aaPredicted RBP24.61■■□□□ 1.53
LINC01550-201ENST00000499006 UTP14AQ9BVJ6 771 aaKnown RBP24.61■■□□□ 1.53
LINC01550-201ENST00000499006 PSDA5PKW4 1024 aaPredicted RBP24.6■■□□□ 1.53
LINC01550-201ENST00000499006 POLRMTO00411 1230 aaKnown RBP24.6■■□□□ 1.53
LINC01550-201ENST00000499006 GNAI3P08754 354 aa24.6■■□□□ 1.53
LINC01550-201ENST00000499006 DDR1Q08345 913 aa24.6■■□□□ 1.53
LINC01550-201ENST00000499006 MSL1Q68DK7 614 aa24.6■■□□□ 1.53
LINC01550-201ENST00000499006 CHMP4BQ9H444 224 aaKnown RBP24.6■■□□□ 1.53
LINC01550-201ENST00000499006 TRMT112Q9UI30 125 aaKnown RBP24.59■■□□□ 1.53
LINC01550-201ENST00000499006 UBE3BQ7Z3V4 1068 aa24.58■■□□□ 1.53
LINC01550-201ENST00000499006 JARID2Q92833 1246 aaPredicted RBP24.58■■□□□ 1.53
LINC01550-201ENST00000499006 FAM89AQ96GI7 184 aa24.58■■□□□ 1.53
LINC01550-201ENST00000499006 NYXQ9GZU5 481 aa24.58■■□□□ 1.53
LINC01550-201ENST00000499006 CDHR2Q9BYE9 1310 aa24.58■■□□□ 1.53
LINC01550-201ENST00000499006 FAM177BA6PVY3 158 aa24.58■■□□□ 1.52
LINC01550-201ENST00000499006 UBTFL1P0CB47 393 aaPredicted RBP24.58■■□□□ 1.52
LINC01550-201ENST00000499006 SYNE4Q8N205 404 aa24.58■■□□□ 1.52
LINC01550-201ENST00000499006 SH3TC1Q8TE82 1336 aa24.57■■□□□ 1.52
LINC01550-201ENST00000499006 SERPINB2P05120 415 aa24.57■■□□□ 1.52
LINC01550-201ENST00000499006 MMP10P09238 476 aa24.57■■□□□ 1.52
LINC01550-201ENST00000499006 AAMPQ13685 434 aa24.57■■□□□ 1.52
LINC01550-201ENST00000499006 NBPF5PQ86XG9 351 aaPredicted RBP24.57■■□□□ 1.52
LINC01550-201ENST00000499006 ANKRD31Q8N7Z5 1873 aa24.56■■□□□ 1.52
LINC01550-201ENST00000499006 RTL5Q5HYW3 569 aaPredicted RBP24.56■■□□□ 1.52
LINC01550-201ENST00000499006 TPTE2Q6XPS3 522 aa24.56■■□□□ 1.52
LINC01550-201ENST00000499006 KAZALD1Q96I82 304 aa24.56■■□□□ 1.52
LINC01550-201ENST00000499006 MTFR1LQ9H019 292 aa24.56■■□□□ 1.52
LINC01550-201ENST00000499006 NUTM1Q86Y26 1132 aa24.55■■□□□ 1.52
LINC01550-201ENST00000499006 SUCLG2Q96I99 432 aa24.55■■□□□ 1.52
LINC01550-201ENST00000499006 ZBTB7AO95365 584 aa24.54■■□□□ 1.52
LINC01550-201ENST00000499006 GNAI2P04899 355 aa24.54■■□□□ 1.52
LINC01550-201ENST00000499006 ERFEQ4G0M1 354 aa24.54■■□□□ 1.52
LINC01550-201ENST00000499006 PLA2G12BQ9BX93 195 aa24.54■■□□□ 1.52
LINC01550-201ENST00000499006 TNRC6CQ9HCJ0 1690 aaKnown RBP24.54■■□□□ 1.52
LINC01550-201ENST00000499006 HDAC5Q9UQL6 1122 aa24.53■■□□□ 1.52
LINC01550-201ENST00000499006 LRRFIP2Q9Y608 721 aaKnown RBP24.53■■□□□ 1.52
LINC01550-201ENST00000499006 PARP3Q9Y6F1 533 aa24.53■■□□□ 1.52
LINC01550-201ENST00000499006 ABCC12Q96J65 1359 aa24.53■■□□□ 1.52
LINC01550-201ENST00000499006 IRS4O14654 1257 aaPredicted RBP24.52■■□□□ 1.52
LINC01550-201ENST00000499006 SLC10A5Q5PT55 438 aa24.52■■□□□ 1.52
LINC01550-201ENST00000499006 PRR5LQ6MZQ0 368 aa24.52■■□□□ 1.52
LINC01550-201ENST00000499006 CNBD1Q8NA66 436 aa24.52■■□□□ 1.52
LINC01550-201ENST00000499006 C1orf115Q9H7X2 142 aa24.52■■□□□ 1.52
LINC01550-201ENST00000499006 KIF13BQ9NQT8 1826 aa24.52■■□□□ 1.52
LINC01550-201ENST00000499006 RIC1Q4ADV7 1423 aa24.52■■□□□ 1.52
LINC01550-201ENST00000499006 ERICH6BQ5W0A0 696 aa24.51■■□□□ 1.51
LINC01550-201ENST00000499006 FOXO4P98177 505 aa24.51■■□□□ 1.51
LINC01550-201ENST00000499006 EPHA10Q5JZY3 1008 aa24.51■■□□□ 1.51
LINC01550-201ENST00000499006 GTF2E1P29083 439 aaPredicted RBP24.5■■□□□ 1.51
LINC01550-201ENST00000499006 BICC1Q9H694 974 aaKnown RBP24.5■■□□□ 1.51
LINC01550-201ENST00000499006 ATF5Q9Y2D1 282 aaPredicted RBP24.5■■□□□ 1.51
LINC01550-201ENST00000499006 PDE8AO60658 829 aa24.49■■□□□ 1.51
LINC01550-201ENST00000499006 HCLS1P14317 486 aaPredicted RBP24.49■■□□□ 1.51
LINC01550-201ENST00000499006 RABL6Q3YEC7 729 aaPredicted RBP24.49■■□□□ 1.51
LINC01550-201ENST00000499006 SGIP1Q9BQI5 828 aa24.49■■□□□ 1.51
LINC01550-201ENST00000499006 HSP90B1P14625 803 aaKnown RBP24.48■■□□□ 1.51
LINC01550-201ENST00000499006 ANKRD44Q8N8A2 993 aa24.48■■□□□ 1.51
LINC01550-201ENST00000499006 PCDHB15Q9Y5E8 787 aa24.48■■□□□ 1.51
LINC01550-201ENST00000499006 NPHP1O15259 732 aa24.47■■□□□ 1.51
LINC01550-201ENST00000499006 ST5P78524 1137 aa24.47■■□□□ 1.51
LINC01550-201ENST00000499006 CEP85Q6P2H3 762 aa24.47■■□□□ 1.51
LINC01550-201ENST00000499006 CCDC24Q8N4L8 307 aa24.47■■□□□ 1.51
LINC01550-201ENST00000499006 TAF1P21675 1872 aa24.46■■□□□ 1.51
LINC01550-201ENST00000499006 CSF1RP07333 972 aa24.46■■□□□ 1.51
LINC01550-201ENST00000499006 MTX1Q13505 466 aa24.46■■□□□ 1.51
LINC01550-201ENST00000499006 CTSWP56202 376 aa24.45■■□□□ 1.51
LINC01550-201ENST00000499006 PTGER2P43116 358 aa24.45■■□□□ 1.5
LINC01550-201ENST00000499006 SIRT2Q8IXJ6 389 aa24.45■■□□□ 1.5
LINC01550-201ENST00000499006 RPAP2Q8IXW5 612 aaPredicted RBP24.45■■□□□ 1.5
LINC01550-201ENST00000499006 TTLL11Q8NHH1 800 aa24.45■■□□□ 1.5
LINC01550-201ENST00000499006 COL11A2P13942 1736 aaPredicted RBP24.44■■□□□ 1.5
LINC01550-201ENST00000499006 POLD1P28340 1107 aa24.44■■□□□ 1.5
LINC01550-201ENST00000499006 ATP8B2P98198 1209 aa24.44■■□□□ 1.5
LINC01550-201ENST00000499006 LMBR1LQ6UX01 489 aa24.44■■□□□ 1.5
LINC01550-201ENST00000499006 C3orf67Q6ZVT6 689 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms