RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 MX1P20591 662 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 CHMLP26374 656 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 CHAF1AQ13111 956 aaPredicted RBP5.35□□□□□ -1.55
TNC-208ENST00000498724 RRS1Q15050 365 aaKnown RBP5.35□□□□□ -1.55
TNC-208ENST00000498724 KRT24Q2M2I5 525 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 SLC4A10Q6U841 1118 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 USP48Q86UV5 1035 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 TMEM87AQ8NBN3 555 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 SLAIN1Q8ND83 568 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 PIBF1Q8WXW3 757 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 RILPL2Q969X0 211 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 LRRCC1Q9C099 1032 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 SRCIN1Q9C0H9 1055 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 USP25Q9UHP3 1055 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 PRDM4Q9UKN5 801 aa5.35□□□□□ -1.55
TNC-208ENST00000498724 ATRNO75882 1429 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 SPATA31A3Q5VYP0 1347 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 ZBTB7CA1YPR0 619 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 GOLGA6L6A8MZA4 724 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 WASLO00401 505 aaPredicted RBP5.34□□□□□ -1.55
TNC-208ENST00000498724 EPB41L2O43491 1005 aaKnown RBP5.34□□□□□ -1.55
TNC-208ENST00000498724 GADD45BO75293 160 aaPredicted RBP5.34□□□□□ -1.55
TNC-208ENST00000498724 SLC34A2O95436 690 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 ADCY5O95622 1261 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 GNAI3P08754 354 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 SF3B2Q13435 895 aaKnown RBP5.34□□□□□ -1.55
TNC-208ENST00000498724 NOLC1Q14978 699 aaKnown RBP eCLIP5.34□□□□□ -1.55
TNC-208ENST00000498724 FOXD4L6Q3SYB3 417 aaPredicted RBP5.34□□□□□ -1.55
TNC-208ENST00000498724 SULT6B1Q6IMI4 303 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 FOXD4L3Q6VB84 417 aaPredicted RBP5.34□□□□□ -1.55
TNC-208ENST00000498724 DEFB132Q7Z7B7 95 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 AEBP1Q8IUX7 1158 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 SEPT12Q8IYM1 358 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 ZNF710Q8N1W2 664 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 IL17RAQ96F46 866 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 STK31Q9BXU1 1019 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 GDPD2Q9HCC8 539 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 ZSWIM6Q9HCJ5 1215 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 PRDM10Q9NQV6 1147 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 PALD1Q9ULE6 856 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 EXOC6BQ9Y2D4 811 aa5.34□□□□□ -1.55
TNC-208ENST00000498724 MON2Q7Z3U7 1717 aa5.34□□□□□ -1.56
TNC-208ENST00000498724 CRB1P82279 1406 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 ARHGEF10O15013 1369 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 RPAP1Q9BWH6 1393 aaPredicted RBP5.33□□□□□ -1.56
TNC-208ENST00000498724 SALL3Q9BXA9 1300 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 ZSCAN22P10073 491 aaPredicted RBP5.33□□□□□ -1.56
TNC-208ENST00000498724 HSPA4P34932 840 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 GTF2F1P35269 517 aaKnown RBP eCLIP5.33□□□□□ -1.56
TNC-208ENST00000498724 UBE2HP62256 183 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 ATP8B2P98198 1209 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 EIF4A2Q14240 407 aaKnown RBP5.33□□□□□ -1.56
TNC-208ENST00000498724 UTP14CQ5TAP6 766 aaKnown RBP5.33□□□□□ -1.56
TNC-208ENST00000498724 TSHZ3Q63HK5 1081 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 MCM10Q7L590 875 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 RTF1Q92541 710 aaKnown RBP5.33□□□□□ -1.56
TNC-208ENST00000498724 NUDT16Q96DE0 195 aaKnown RBP5.33□□□□□ -1.56
TNC-208ENST00000498724 SIRT1Q96EB6 747 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 ZNF830Q96NB3 372 aaPredicted RBP5.33□□□□□ -1.56
TNC-208ENST00000498724 UPF3BQ9BZI7 483 aaKnown RBP5.33□□□□□ -1.56
TNC-208ENST00000498724 DIAPH3Q9NSV4 1193 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 SPTLC3Q9NUV7 552 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 STAP2Q9UGK3 403 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 TSPYL4Q9UJ04 414 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 SMC3Q9UQE7 1217 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 CNPY2Q9Y2B0 182 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 KIF3AQ9Y496 699 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.33□□□□□ -1.56
TNC-208ENST00000498724 ATP6V1DQ9Y5K8 247 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 ITSN1Q15811 1721 aa5.33□□□□□ -1.56
TNC-208ENST00000498724 PXDNQ92626 1479 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 RGPD8O14715 1765 aaPredicted RBP5.32□□□□□ -1.56
TNC-208ENST00000498724 F6X3S4 739 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 FIBPO43427 364 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 RAB11FIP3O75154 756 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 KDM4AO75164 1064 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 F13A1P00488 732 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 HCLS1P14317 486 aaPredicted RBP5.32□□□□□ -1.56
TNC-208ENST00000498724 DMTNQ08495 405 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 FKBP5Q13451 457 aaPredicted RBP5.32□□□□□ -1.56
TNC-208ENST00000498724 VPS72Q15906 364 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 TPRNQ4KMQ1 711 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 FAM182BQ5T319 152 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 G2E3Q7L622 706 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 KRT27Q7Z3Y8 459 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 MPNDQ8N594 471 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 TTC12Q9H892 705 aaPredicted RBP5.32□□□□□ -1.56
TNC-208ENST00000498724 LIMCH1Q9UPQ0 1083 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 SRCAPQ6ZRS2 3230 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 TUBGCP6Q96RT7 1819 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 AKAP12Q02952 1782 aa5.32□□□□□ -1.56
TNC-208ENST00000498724 COL22A1Q8NFW1 1626 aaPredicted RBP5.31□□□□□ -1.56
TNC-208ENST00000498724 TTC21BQ7Z4L5 1316 aa5.31□□□□□ -1.56
TNC-208ENST00000498724 RAD50Q92878 1312 aa5.31□□□□□ -1.56
TNC-208ENST00000498724 PSDA5PKW4 1024 aaPredicted RBP5.31□□□□□ -1.56
TNC-208ENST00000498724 STX6O43752 255 aa5.31□□□□□ -1.56
TNC-208ENST00000498724 ONECUT3O60422 494 aaPredicted RBP5.31□□□□□ -1.56
TNC-208ENST00000498724 UBTFL1P0CB47 393 aaPredicted RBP5.31□□□□□ -1.56
TNC-208ENST00000498724 FAM98CQ17RN3 349 aaKnown RBP5.31□□□□□ -1.56
TNC-208ENST00000498724 PPP4R3BQ5MIZ7 849 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms