RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 SUSD4Q5VX71 490 aa20.59■□□□□ 0.89
LMNA-217ENST00000498722 PIM2Q9P1W9 311 aa20.59■□□□□ 0.89
LMNA-217ENST00000498722 LAMB2P55268 1798 aa20.59■□□□□ 0.89
LMNA-217ENST00000498722 IBTKQ9P2D0 1353 aaPredicted RBP20.58■□□□□ 0.88
LMNA-217ENST00000498722 ATP5J2-PTCD1G3V325 749 aa20.57■□□□□ 0.88
LMNA-217ENST00000498722 ERFEQ4G0M1 354 aa20.57■□□□□ 0.88
LMNA-217ENST00000498722 G2E3Q7L622 706 aa20.57■□□□□ 0.88
LMNA-217ENST00000498722 ZNF622Q969S3 477 aaKnown RBP eCLIP20.57■□□□□ 0.886e-15■□□□□ 8.5
LMNA-217ENST00000498722 UTP14AQ9BVJ6 771 aaKnown RBP20.57■□□□□ 0.88
LMNA-217ENST00000498722 GRIN3BO60391 1043 aa20.56■□□□□ 0.88
LMNA-217ENST00000498722 KCNA3P22001 575 aa20.56■□□□□ 0.88
LMNA-217ENST00000498722 FKBP5Q13451 457 aaPredicted RBP20.56■□□□□ 0.88
LMNA-217ENST00000498722 DALRD3Q5D0E6 543 aaKnown RBP20.56■□□□□ 0.88
LMNA-217ENST00000498722 MYD88Q99836 296 aa20.56■□□□□ 0.88
LMNA-217ENST00000498722 MAP3K2Q9Y2U5 619 aa20.56■□□□□ 0.88
LMNA-217ENST00000498722 ABCC12Q96J65 1359 aa20.56■□□□□ 0.88
LMNA-217ENST00000498722 NTSR2O95665 410 aa20.55■□□□□ 0.88
LMNA-217ENST00000498722 FLIIQ13045 1269 aa20.55■□□□□ 0.88
LMNA-217ENST00000498722 NLRP10Q86W26 655 aa20.55■□□□□ 0.88
LMNA-217ENST00000498722 TRMT112Q9UI30 125 aaKnown RBP20.55■□□□□ 0.88
LMNA-217ENST00000498722 PDZRN3Q9UPQ7 1066 aa20.55■□□□□ 0.88
LMNA-217ENST00000498722 SLX4Q8IY92 1834 aa20.55■□□□□ 0.88
LMNA-217ENST00000498722 DDX60Q8IY21 1712 aaKnown RBP20.55■□□□□ 0.88
LMNA-217ENST00000498722 PI4KAP2A4QPH2 592 aa20.54■□□□□ 0.88
LMNA-217ENST00000498722 IRX6P78412 446 aaPredicted RBP20.54■□□□□ 0.88
LMNA-217ENST00000498722 KSR2Q6VAB6 950 aa20.54■□□□□ 0.88
LMNA-217ENST00000498722 PI4KAP1Q8N8J0 262 aa20.54■□□□□ 0.88
LMNA-217ENST00000498722 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.54■□□□□ 0.88
LMNA-217ENST00000498722 CCDC88AQ3V6T2 1871 aa20.54■□□□□ 0.88
LMNA-217ENST00000498722 ADCY9O60503 1353 aa20.53■□□□□ 0.88
LMNA-217ENST00000498722 MYH3P11055 1940 aa20.53■□□□□ 0.88
LMNA-217ENST00000498722 CT47B1P0C2W7 299 aaPredicted RBP20.53■□□□□ 0.88
LMNA-217ENST00000498722 NEXNQ0ZGT2 675 aa20.53■□□□□ 0.88
LMNA-217ENST00000498722 TTLL6Q8N841 843 aa20.53■□□□□ 0.88
LMNA-217ENST00000498722 ISCA1Q9BUE6 129 aa20.53■□□□□ 0.88
LMNA-217ENST00000498722 METTL22Q9BUU2 404 aaPredicted RBP20.53■□□□□ 0.88
LMNA-217ENST00000498722 RTL5Q5HYW3 569 aaPredicted RBP20.52■□□□□ 0.87
LMNA-217ENST00000498722 TAF1P21675 1872 aa20.51■□□□□ 0.87
LMNA-217ENST00000498722 SH3TC1Q8TE82 1336 aa20.51■□□□□ 0.87
LMNA-217ENST00000498722 SRGNP10124 158 aa20.51■□□□□ 0.87
LMNA-217ENST00000498722 RPGRQ92834 1020 aaKnown RBP20.51■□□□□ 0.87
LMNA-217ENST00000498722 MASTLQ96GX5 879 aa20.51■□□□□ 0.87
LMNA-217ENST00000498722 BCL2L13Q9BXK5 485 aa20.51■□□□□ 0.87
LMNA-217ENST00000498722 PPP4R2Q9NY27 417 aa20.51■□□□□ 0.87
LMNA-217ENST00000498722 NPR1P16066 1061 aa20.5■□□□□ 0.87
LMNA-217ENST00000498722 STYK1Q6J9G0 422 aa20.5■□□□□ 0.87
LMNA-217ENST00000498722 ARHGAP27Q6ZUM4 889 aa20.5■□□□□ 0.87
LMNA-217ENST00000498722 SYNE4Q8N205 404 aa20.5■□□□□ 0.87
LMNA-217ENST00000498722 CNKSR1Q969H4 720 aa20.5■□□□□ 0.87
LMNA-217ENST00000498722 ZNF219Q9P2Y4 722 aaPredicted RBP20.5■□□□□ 0.87
LMNA-217ENST00000498722 RIC1Q4ADV7 1423 aa20.49■□□□□ 0.87
LMNA-217ENST00000498722 UTRNP46939 3433 aa20.49■□□□□ 0.87
LMNA-217ENST00000498722 SBF1O95248 1867 aa20.49■□□□□ 0.87
LMNA-217ENST00000498722 HCLS1P14317 486 aaPredicted RBP20.49■□□□□ 0.87
LMNA-217ENST00000498722 YY1P25490 414 aa20.49■□□□□ 0.87
LMNA-217ENST00000498722 FAM89AQ96GI7 184 aa20.49■□□□□ 0.87
LMNA-217ENST00000498722 NLRP3Q96P20 1036 aa20.49■□□□□ 0.87
LMNA-217ENST00000498722 CWC25Q9NXE8 425 aaPredicted RBP20.49■□□□□ 0.87
LMNA-217ENST00000498722 CCDC191Q8NCU4 936 aa20.48■□□□□ 0.87
LMNA-217ENST00000498722 DNAAF4Q8WXU2 420 aa20.48■□□□□ 0.87
LMNA-217ENST00000498722 SMC4Q9NTJ3 1288 aa20.48■□□□□ 0.87
LMNA-217ENST00000498722 F6X3S4 739 aa20.47■□□□□ 0.87
LMNA-217ENST00000498722 TRIM28Q13263 835 aaKnown RBP20.47■□□□□ 0.87
LMNA-217ENST00000498722 CWF19L2Q2TBE0 894 aaKnown RBP20.47■□□□□ 0.87
LMNA-217ENST00000498722 PRPF40BQ6NWY9 871 aaKnown RBP20.47■□□□□ 0.87
LMNA-217ENST00000498722 SSH1Q8WYL5 1049 aa20.47■□□□□ 0.87
LMNA-217ENST00000498722 FER1L6Q2WGJ9 1857 aa20.46■□□□□ 0.87
LMNA-217ENST00000498722 KLRG2A4D1S0 409 aaPredicted RBP20.46■□□□□ 0.87
LMNA-217ENST00000498722 MRPL50Q8N5N7 158 aaKnown RBP20.46■□□□□ 0.87
LMNA-217ENST00000498722 CRY2Q49AN0 593 aa20.45■□□□□ 0.86
LMNA-217ENST00000498722 SLC10A5Q5PT55 438 aa20.45■□□□□ 0.86
LMNA-217ENST00000498722 SLC4A10Q6U841 1118 aa20.45■□□□□ 0.86
LMNA-217ENST00000498722 C3orf67Q6ZVT6 689 aa20.45■□□□□ 0.86
LMNA-217ENST00000498722 ZBTB38Q8NAP3 1195 aaPredicted RBP20.45■□□□□ 0.86
LMNA-217ENST00000498722 JARID2Q92833 1246 aaPredicted RBP20.45■□□□□ 0.86
LMNA-217ENST00000498722 IRS4O14654 1257 aaPredicted RBP20.44■□□□□ 0.86
LMNA-217ENST00000498722 C21orf2O43822 256 aa20.44■□□□□ 0.86
LMNA-217ENST00000498722 IGKV5-2P06315 115 aa20.44■□□□□ 0.86
LMNA-217ENST00000498722 ALDH1B1P30837 517 aa20.44■□□□□ 0.86
LMNA-217ENST00000498722 ALDH1L2Q3SY69 923 aa20.44■□□□□ 0.86
LMNA-217ENST00000498722 RBM17Q96I25 401 aaKnown RBP20.44■□□□□ 0.86
LMNA-217ENST00000498722 SPEF2Q9C093 1822 aa20.44■□□□□ 0.86
LMNA-217ENST00000498722 NEURL1BA8MQ27 555 aa20.43■□□□□ 0.86
LMNA-217ENST00000498722 PCCAP05165 728 aaPredicted RBP20.42■□□□□ 0.86
LMNA-217ENST00000498722 HSP90B1P14625 803 aaKnown RBP20.42■□□□□ 0.86
LMNA-217ENST00000498722 LINS1Q8NG48 757 aa20.42■□□□□ 0.86
LMNA-217ENST00000498722 PTPRCP08575 1304 aa20.41■□□□□ 0.86
LMNA-217ENST00000498722 DICER1Q9UPY3 1922 aaKnown RBP20.4■□□□□ 0.86
LMNA-217ENST00000498722 RARSP54136 660 aaKnown RBP20.4■□□□□ 0.86
LMNA-217ENST00000498722 DDX46Q7L014 1031 aaKnown RBP20.4■□□□□ 0.86
LMNA-217ENST00000498722 UBE3BQ7Z3V4 1068 aa20.4■□□□□ 0.86
LMNA-217ENST00000498722 PLIN1O60240 522 aa20.39■□□□□ 0.85
LMNA-217ENST00000498722 HOXA10P31260 410 aaPredicted RBP20.39■□□□□ 0.85
LMNA-217ENST00000498722 RASSF7Q02833 373 aa20.39■□□□□ 0.85
LMNA-217ENST00000498722 GCKRQ14397 625 aa20.39■□□□□ 0.85
LMNA-217ENST00000498722 SOGA3Q5TF21 947 aa20.39■□□□□ 0.85
LMNA-217ENST00000498722 CRAMP1Q96RY5 1269 aa20.39■□□□□ 0.85
LMNA-217ENST00000498722 TIAM2Q8IVF5 1701 aa20.38■□□□□ 0.85
LMNA-217ENST00000498722 BCAR3O75815 825 aa20.38■□□□□ 0.85
LMNA-217ENST00000498722 ABCC4O15439 1325 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 259.3 ms