RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNX13-212ENST00000498463 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
SNX13-212ENST00000498463 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
SNX13-212ENST00000498463 FOXD3Q9UJU5 478 aaPredicted RBP12.05□□□□□ -0.48
SNX13-212ENST00000498463 MEN1O00255 615 aa12.04□□□□□ -0.48
SNX13-212ENST00000498463 MICAL2O94851 1124 aa12.04□□□□□ -0.48
SNX13-212ENST00000498463 TXLNAP40222 546 aa12.04□□□□□ -0.48
SNX13-212ENST00000498463 NLGN1Q8N2Q7 840 aa12.04□□□□□ -0.48
SNX13-212ENST00000498463 FAM8A1Q9UBU6 413 aa12.04□□□□□ -0.48
SNX13-212ENST00000498463 TNFRSF21O75509 655 aa12.03□□□□□ -0.48
SNX13-212ENST00000498463 ATF4P18848 351 aaPredicted RBP12.03□□□□□ -0.48
SNX13-212ENST00000498463 ST13P50502 369 aaKnown RBP12.03□□□□□ -0.48
SNX13-212ENST00000498463 PAK2Q13177 524 aa12.03□□□□□ -0.48
SNX13-212ENST00000498463 CBLBQ13191 982 aa12.03□□□□□ -0.48
SNX13-212ENST00000498463 NLRP3Q96P20 1036 aa12.03□□□□□ -0.48
SNX13-212ENST00000498463 ZSCAN10Q96SZ4 725 aaPredicted RBP12.03□□□□□ -0.48
SNX13-212ENST00000498463 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNX13-212ENST00000498463 TGFBR3LH3BV60 316 aa12.02□□□□□ -0.49
SNX13-212ENST00000498463 USP17L7P0C7H9 530 aa12.02□□□□□ -0.49
SNX13-212ENST00000498463 PTGIRP43119 386 aa12.02□□□□□ -0.49
SNX13-212ENST00000498463 ERMP1Q7Z2K6 904 aa12.02□□□□□ -0.49
SNX13-212ENST00000498463 SNX29Q8TEQ0 813 aa12.02□□□□□ -0.49
SNX13-212ENST00000498463 GPRASP2Q96D09 838 aa12.02□□□□□ -0.49
SNX13-212ENST00000498463 KCNC4Q03721 635 aa12.01□□□□□ -0.49
SNX13-212ENST00000498463 BMS1Q14692 1282 aaKnown RBP12.01□□□□□ -0.49
SNX13-212ENST00000498463 EGFLAMQ63HQ2 1017 aa12.01□□□□□ -0.49
SNX13-212ENST00000498463 TMEM214Q6NUQ4 689 aaKnown RBP12.01□□□□□ -0.49
SNX13-212ENST00000498463 RHBDD1Q8TEB9 315 aa12.01□□□□□ -0.49
SNX13-212ENST00000498463 V9GY48 417 aaPredicted RBP12.01□□□□□ -0.49
SNX13-212ENST00000498463 SBNO2Q9Y2G9 1366 aa12.01□□□□□ -0.49
SNX13-212ENST00000498463 ZNF746Q6NUN9 644 aaPredicted RBP12□□□□□ -0.49
SNX13-212ENST00000498463 RHPN1Q8TCX5 695 aa12□□□□□ -0.49
SNX13-212ENST00000498463 HIF1AQ16665 826 aa11.99□□□□□ -0.49
SNX13-212ENST00000498463 JAZF1Q86VZ6 243 aa11.99□□□□□ -0.49
SNX13-212ENST00000498463 MRGPRX2Q96LB1 330 aa11.99□□□□□ -0.49
SNX13-212ENST00000498463 CHMP4AQ9BY43 222 aa11.99□□□□□ -0.49
SNX13-212ENST00000498463 COPRSQ9NQ92 184 aa11.99□□□□□ -0.49
SNX13-212ENST00000498463 WNT7AO00755 349 aa11.98□□□□□ -0.49
SNX13-212ENST00000498463 GTF2E1P29083 439 aaPredicted RBP11.98□□□□□ -0.49
SNX13-212ENST00000498463 XKR5Q6UX68 686 aa11.98□□□□□ -0.49
SNX13-212ENST00000498463 Q6ZVU0 165 aa11.98□□□□□ -0.49
SNX13-212ENST00000498463 AGBL1Q96MI9 1066 aa11.98□□□□□ -0.49
SNX13-212ENST00000498463 SRCIN1Q9C0H9 1055 aa11.98□□□□□ -0.49
SNX13-212ENST00000498463 PLA2G4AP47712 749 aa11.97□□□□□ -0.49
SNX13-212ENST00000498463 NNTQ13423 1086 aa11.97□□□□□ -0.49
SNX13-212ENST00000498463 IER5Q5VY09 327 aa11.97□□□□□ -0.49
SNX13-212ENST00000498463 ZNF438Q7Z4V0 828 aa11.97□□□□□ -0.49
SNX13-212ENST00000498463 C7orf43Q8WVR3 580 aa11.97□□□□□ -0.49
SNX13-212ENST00000498463 ZFYVE28Q9HCC9 887 aa11.97□□□□□ -0.49
SNX13-212ENST00000498463 NPHS2Q9NP85 383 aa11.97□□□□□ -0.49
SNX13-212ENST00000498463 DMGDHQ9UI17 866 aaKnown RBP11.97□□□□□ -0.49
SNX13-212ENST00000498463 ITGBL1O95965 494 aaPredicted RBP11.96□□□□□ -0.49
SNX13-212ENST00000498463 IDH3AP50213 366 aa11.96□□□□□ -0.49
SNX13-212ENST00000498463 TRIP4Q15650 581 aaPredicted RBP11.96□□□□□ -0.49
SNX13-212ENST00000498463 NXPE4Q6UWF7 544 aa11.96□□□□□ -0.49
SNX13-212ENST00000498463 SUSD3Q96L08 255 aa11.96□□□□□ -0.49
SNX13-212ENST00000498463 PHACTR2O75167 634 aa11.95□□□□□ -0.5
SNX13-212ENST00000498463 RELBQ01201 579 aa11.95□□□□□ -0.5
SNX13-212ENST00000498463 GNASQ5JWF2 1037 aa11.95□□□□□ -0.5
SNX13-212ENST00000498463 PDE12Q6L8Q7 609 aaKnown RBP11.95□□□□□ -0.5
SNX13-212ENST00000498463 LIAT1Q6ZQX7 453 aa11.95□□□□□ -0.5
SNX13-212ENST00000498463 RASGRP4Q8TDF6 673 aa11.95□□□□□ -0.5
SNX13-212ENST00000498463 KLRG1Q96E93 195 aa11.95□□□□□ -0.5
SNX13-212ENST00000498463 BCO2Q9BYV7 579 aa11.95□□□□□ -0.5
SNX13-212ENST00000498463 FNDC3AQ9Y2H6 1198 aaKnown RBP11.95□□□□□ -0.5
SNX13-212ENST00000498463 USP20Q9Y2K6 914 aa11.95□□□□□ -0.5
SNX13-212ENST00000498463 TCEAL1Q15170 157 aa11.94□□□□□ -0.5
SNX13-212ENST00000498463 NBPF1Q3BBV0 1214 aa11.94□□□□□ -0.5
SNX13-212ENST00000498463 CKAP2LQ8IYA6 745 aa11.94□□□□□ -0.5
SNX13-212ENST00000498463 ZNF280CQ8ND82 737 aa11.94□□□□□ -0.5
SNX13-212ENST00000498463 HSH2DQ96JZ2 352 aa11.94□□□□□ -0.5
SNX13-212ENST00000498463 SPACA7Q96KW9 195 aa11.94□□□□□ -0.5
SNX13-212ENST00000498463 KBTBD4Q9NVX7 518 aa11.94□□□□□ -0.5
SNX13-212ENST00000498463 ARSDP51689 593 aa11.93□□□□□ -0.5
SNX13-212ENST00000498463 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
SNX13-212ENST00000498463 C4orf17Q53FE4 359 aa11.93□□□□□ -0.5
SNX13-212ENST00000498463 ITPKCQ96DU7 683 aa11.93□□□□□ -0.5
SNX13-212ENST00000498463 ZNF395Q9H8N7 513 aaPredicted RBP11.93□□□□□ -0.5
SNX13-212ENST00000498463 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.93□□□□□ -0.5
SNX13-212ENST00000498463 ZDHHC3Q9NYG2 299 aa11.93□□□□□ -0.5
SNX13-212ENST00000498463 MRPL42Q9Y6G3 142 aaKnown RBP11.93□□□□□ -0.5
SNX13-212ENST00000498463 UBAP1LF5GYI3 381 aa11.92□□□□□ -0.5
SNX13-212ENST00000498463 ALDH1A1P00352 501 aa11.92□□□□□ -0.5
SNX13-212ENST00000498463 POLR3DP05423 398 aaPredicted RBP11.92□□□□□ -0.5
SNX13-212ENST00000498463 INPP5BP32019 993 aa11.92□□□□□ -0.5
SNX13-212ENST00000498463 NBPF10Q6P3W6 841 aaKnown RBP11.92□□□□□ -0.5
SNX13-212ENST00000498463 ELP3Q9H9T3 547 aa11.92□□□□□ -0.5
SNX13-212ENST00000498463 NEUROD4Q9HD90 331 aa11.92□□□□□ -0.5
SNX13-212ENST00000498463 TMEM63CQ9P1W3 806 aa11.92□□□□□ -0.5
SNX13-212ENST00000498463 RTCBQ9Y3I0 505 aaKnown RBP11.92□□□□□ -0.5
SNX13-212ENST00000498463 POTECB2RU33 542 aa11.91□□□□□ -0.5
SNX13-212ENST00000498463 K7ELQ4 463 aaPredicted RBP11.91□□□□□ -0.5
SNX13-212ENST00000498463 GADD45BO75293 160 aaPredicted RBP11.91□□□□□ -0.5
SNX13-212ENST00000498463 SERINC3Q13530 473 aa11.91□□□□□ -0.5
SNX13-212ENST00000498463 NBPF6Q5VWK0 638 aa11.91□□□□□ -0.5
SNX13-212ENST00000498463 EMID1Q96A84 441 aaPredicted RBP11.91□□□□□ -0.5
SNX13-212ENST00000498463 MRFAP1L1Q96HT8 127 aa11.91□□□□□ -0.5
SNX13-212ENST00000498463 GPATCH3Q96I76 525 aa11.91□□□□□ -0.5
SNX13-212ENST00000498463 NBPF4Q96M43 638 aa11.91□□□□□ -0.5
SNX13-212ENST00000498463 SPON2Q9BUD6 331 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms