RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 PHAXQ9H814 394 aaKnown RBP12.87□□□□□ -0.35
TSPAN1-209ENST00000498443 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
TSPAN1-209ENST00000498443 POLRMTO00411 1230 aaKnown RBP12.86□□□□□ -0.35
TSPAN1-209ENST00000498443 HDGFL1Q5TGJ6 251 aa12.86□□□□□ -0.35
TSPAN1-209ENST00000498443 COPS6Q7L5N1 327 aa12.86□□□□□ -0.35
TSPAN1-209ENST00000498443 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
TSPAN1-209ENST00000498443 ZC3H4Q9UPT8 1303 aaKnown RBP12.86□□□□□ -0.35
TSPAN1-209ENST00000498443 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
TSPAN1-209ENST00000498443 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
TSPAN1-209ENST00000498443 GPTP24298 496 aa12.85□□□□□ -0.35
TSPAN1-209ENST00000498443 CTCFP49711 727 aaPredicted RBP12.85□□□□□ -0.35
TSPAN1-209ENST00000498443 LBX1P52954 281 aa12.85□□□□□ -0.35
TSPAN1-209ENST00000498443 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
TSPAN1-209ENST00000498443 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
TSPAN1-209ENST00000498443 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
TSPAN1-209ENST00000498443 CARMIL3Q8ND23 1372 aa12.84□□□□□ -0.35
TSPAN1-209ENST00000498443 POTECB2RU33 542 aa12.84□□□□□ -0.35
TSPAN1-209ENST00000498443 VAMP4O75379 141 aa12.84□□□□□ -0.35
TSPAN1-209ENST00000498443 PDE3AQ14432 1141 aa12.84□□□□□ -0.35
TSPAN1-209ENST00000498443 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
TSPAN1-209ENST00000498443 C2CD5Q86YS7 1000 aa12.84□□□□□ -0.35
TSPAN1-209ENST00000498443 PRDM10Q9NQV6 1147 aa12.84□□□□□ -0.35
TSPAN1-209ENST00000498443 NOP58Q9Y2X3 529 aaKnown RBP12.84□□□□□ -0.35
TSPAN1-209ENST00000498443 A0A087WZG4 1122 aa12.83□□□□□ -0.36
TSPAN1-209ENST00000498443 SERPINB2P05120 415 aa12.83□□□□□ -0.36
TSPAN1-209ENST00000498443 CT47B1P0C2W7 299 aaPredicted RBP12.83□□□□□ -0.36
TSPAN1-209ENST00000498443 TWISTNBQ3B726 338 aaPredicted RBP12.83□□□□□ -0.36
TSPAN1-209ENST00000498443 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
TSPAN1-209ENST00000498443 TTLL6Q8N841 843 aa12.83□□□□□ -0.36
TSPAN1-209ENST00000498443 IPO9Q96P70 1041 aaKnown RBP12.83□□□□□ -0.36
TSPAN1-209ENST00000498443 DDX21Q9NR30 783 aaKnown RBP eCLIP12.83□□□□□ -0.36
TSPAN1-209ENST00000498443 IL16Q14005 1332 aa12.83□□□□□ -0.36
TSPAN1-209ENST00000498443 CCDC85CA6NKD9 419 aa12.82□□□□□ -0.36
TSPAN1-209ENST00000498443 NFKBIEO00221 500 aa12.82□□□□□ -0.36
TSPAN1-209ENST00000498443 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
TSPAN1-209ENST00000498443 ERFEQ4G0M1 354 aa12.82□□□□□ -0.36
TSPAN1-209ENST00000498443 SLC51AQ86UW1 340 aa12.82□□□□□ -0.36
TSPAN1-209ENST00000498443 JARID2Q92833 1246 aaPredicted RBP12.82□□□□□ -0.36
TSPAN1-209ENST00000498443 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
TSPAN1-209ENST00000498443 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
TSPAN1-209ENST00000498443 MAP3K15Q6ZN16 1313 aa12.82□□□□□ -0.36
TSPAN1-209ENST00000498443 CNTNAP1P78357 1384 aa12.81□□□□□ -0.36
TSPAN1-209ENST00000498443 AFDNP55196 1824 aaKnown RBP12.81□□□□□ -0.36
TSPAN1-209ENST00000498443 VEGFBP49765 207 aa12.81□□□□□ -0.36
TSPAN1-209ENST00000498443 SUSD4Q5VX71 490 aa12.81□□□□□ -0.36
TSPAN1-209ENST00000498443 NUTM1Q86Y26 1132 aa12.81□□□□□ -0.36
TSPAN1-209ENST00000498443 ZNF622Q969S3 477 aaKnown RBP eCLIP12.81□□□□□ -0.36
TSPAN1-209ENST00000498443 DDRGK1Q96HY6 314 aa12.81□□□□□ -0.36
TSPAN1-209ENST00000498443 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
TSPAN1-209ENST00000498443 NIP7Q9Y221 180 aaKnown RBP eCLIP12.81□□□□□ -0.36
TSPAN1-209ENST00000498443 UBN2Q6ZU65 1347 aa12.81□□□□□ -0.36
TSPAN1-209ENST00000498443 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
TSPAN1-209ENST00000498443 H0YIN7 160 aa12.8□□□□□ -0.36
TSPAN1-209ENST00000498443 C21orf2O43822 256 aa12.8□□□□□ -0.36
TSPAN1-209ENST00000498443 DDNO94850 711 aaPredicted RBP12.8□□□□□ -0.36
TSPAN1-209ENST00000498443 PRR5LQ6MZQ0 368 aa12.8□□□□□ -0.36
TSPAN1-209ENST00000498443 PLIN1O60240 522 aa12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 SLC4A2P04920 1241 aa12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 PDE4AP27815 886 aa12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 MLLT1Q03111 559 aaPredicted RBP12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 EAPPQ56P03 285 aaPredicted RBP12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 C3orf67Q6ZVT6 689 aa12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 NPM2Q86SE8 214 aaKnown RBP12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 BCL2L13Q9BXK5 485 aa12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 BACH2Q9BYV9 841 aa12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 SCN7AQ01118 1682 aa12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 DLEC1Q9Y238 1755 aa12.79□□□□□ -0.36
TSPAN1-209ENST00000498443 GRM1Q13255 1194 aa12.78□□□□□ -0.36
TSPAN1-209ENST00000498443 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
TSPAN1-209ENST00000498443 KIF6Q6ZMV9 814 aa12.78□□□□□ -0.36
TSPAN1-209ENST00000498443 ZNF34Q8IZ26 560 aa12.78□□□□□ -0.36
TSPAN1-209ENST00000498443 SETDB2Q96T68 719 aa12.78□□□□□ -0.36
TSPAN1-209ENST00000498443 DBF4Q9UBU7 674 aaPredicted RBP12.78□□□□□ -0.36
TSPAN1-209ENST00000498443 BCORQ6W2J9 1755 aa12.78□□□□□ -0.36
TSPAN1-209ENST00000498443 NUP98P52948 1817 aa12.77□□□□□ -0.37
TSPAN1-209ENST00000498443 HOXB7P09629 217 aa12.77□□□□□ -0.37
TSPAN1-209ENST00000498443 CCDC30Q5VVM6 783 aa12.77□□□□□ -0.37
TSPAN1-209ENST00000498443 GIGYF2Q6Y7W6 1299 aaKnown RBP12.77□□□□□ -0.37
TSPAN1-209ENST00000498443 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
TSPAN1-209ENST00000498443 ERBB4Q15303 1308 aa12.77□□□□□ -0.37
TSPAN1-209ENST00000498443 TMEM88BA6NKF7 163 aa12.76□□□□□ -0.37
TSPAN1-209ENST00000498443 ERVV-1B6SEH8 477 aa12.76□□□□□ -0.37
TSPAN1-209ENST00000498443 F6X3S4 739 aa12.76□□□□□ -0.37
TSPAN1-209ENST00000498443 HSPA8P11142 646 aaKnown RBP12.76□□□□□ -0.37
TSPAN1-209ENST00000498443 ANKRD13DQ6ZTN6 518 aa12.76□□□□□ -0.37
TSPAN1-209ENST00000498443 HYPKQ9NX55 129 aa12.76□□□□□ -0.37
TSPAN1-209ENST00000498443 ABCC12Q96J65 1359 aa12.76□□□□□ -0.37
TSPAN1-209ENST00000498443 CACNA1SQ13698 1873 aa12.76□□□□□ -0.37
TSPAN1-209ENST00000498443 NPHP1O15259 732 aa12.75□□□□□ -0.37
TSPAN1-209ENST00000498443 TCIRG1Q13488 830 aa12.75□□□□□ -0.37
TSPAN1-209ENST00000498443 CLEC4GQ6UXB4 293 aa12.75□□□□□ -0.37
TSPAN1-209ENST00000498443 NLRP10Q86W26 655 aa12.75□□□□□ -0.37
TSPAN1-209ENST00000498443 NBPF5PQ86XG9 351 aaPredicted RBP12.75□□□□□ -0.37
TSPAN1-209ENST00000498443 PLBD2Q8NHP8 589 aa12.75□□□□□ -0.37
TSPAN1-209ENST00000498443 MYD88Q99836 296 aa12.75□□□□□ -0.37
TSPAN1-209ENST00000498443 TAOK3Q9H2K8 898 aa12.75□□□□□ -0.37
TSPAN1-209ENST00000498443 WBP1LQ9NX94 342 aa12.75□□□□□ -0.37
TSPAN1-209ENST00000498443 ABT1Q9ULW3 272 aaKnown RBP12.75□□□□□ -0.37
TSPAN1-209ENST00000498443 DICER1Q9UPY3 1922 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms