RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 THSD7BQ9C0I4 1608 aa16.98■□□□□ 0.31
TRIM27-207ENST00000498117 CLSPNQ9HAW4 1339 aa16.97■□□□□ 0.31
TRIM27-207ENST00000498117 SIPA1L3O60292 1781 aaPredicted RBP16.97■□□□□ 0.31
TRIM27-207ENST00000498117 CC2D1BQ5T0F9 858 aaKnown RBP16.97■□□□□ 0.31
TRIM27-207ENST00000498117 SNED1Q8TER0 1413 aa16.96■□□□□ 0.31
TRIM27-207ENST00000498117 NBPF26B4DH59 902 aa16.96■□□□□ 0.31
TRIM27-207ENST00000498117 HLFQ16534 295 aa16.96■□□□□ 0.31
TRIM27-207ENST00000498117 NBPF10Q6P3W6 841 aaKnown RBP16.96■□□□□ 0.31
TRIM27-207ENST00000498117 SAPCD2Q86UD0 394 aa16.96■□□□□ 0.31
TRIM27-207ENST00000498117 NBPF15Q8N660 670 aa16.96■□□□□ 0.31
TRIM27-207ENST00000498117 RPGRQ92834 1020 aaKnown RBP16.96■□□□□ 0.31
TRIM27-207ENST00000498117 HHIPL1Q96JK4 782 aa16.96■□□□□ 0.31
TRIM27-207ENST00000498117 ADARB2Q9NS39 739 aaKnown RBP16.96■□□□□ 0.31
TRIM27-207ENST00000498117 PER1O15534 1290 aaPredicted RBP16.95■□□□□ 0.3
TRIM27-207ENST00000498117 HOXA10P31260 410 aaPredicted RBP16.95■□□□□ 0.3
TRIM27-207ENST00000498117 BRPF1P55201 1214 aaPredicted RBP16.95■□□□□ 0.3
TRIM27-207ENST00000498117 NIM1KQ8IY84 436 aa16.95■□□□□ 0.3
TRIM27-207ENST00000498117 LTBP1Q14766 1721 aa16.94■□□□□ 0.3
TRIM27-207ENST00000498117 CELF2O95319 508 aaKnown RBP16.94■□□□□ 0.3
TRIM27-207ENST00000498117 DGKZQ13574 1117 aa16.94■□□□□ 0.3
TRIM27-207ENST00000498117 NUTM1Q86Y26 1132 aa16.94■□□□□ 0.3
TRIM27-207ENST00000498117 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
TRIM27-207ENST00000498117 PHACTR3Q96KR7 559 aa16.94■□□□□ 0.3
TRIM27-207ENST00000498117 TRPM7Q96QT4 1865 aa16.94■□□□□ 0.3
TRIM27-207ENST00000498117 TRIM26Q12899 539 aaPredicted RBP16.93■□□□□ 0.3
TRIM27-207ENST00000498117 RBM17Q96I25 401 aaKnown RBP16.93■□□□□ 0.3
TRIM27-207ENST00000498117 CRAMP1Q96RY5 1269 aa16.93■□□□□ 0.3
TRIM27-207ENST00000498117 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
TRIM27-207ENST00000498117 GPRC5DQ9NZD1 345 aa16.93■□□□□ 0.3
TRIM27-207ENST00000498117 KIF7Q2M1P5 1343 aa16.93■□□□□ 0.3
TRIM27-207ENST00000498117 COL4A5P29400 1685 aa16.92■□□□□ 0.3
TRIM27-207ENST00000498117 ERVV-1B6SEH8 477 aa16.92■□□□□ 0.3
TRIM27-207ENST00000498117 PPIP5K2O43314 1243 aa16.92■□□□□ 0.3
TRIM27-207ENST00000498117 PRKAR2BP31323 418 aa16.92■□□□□ 0.3
TRIM27-207ENST00000498117 VPS33BQ9H267 617 aa16.92■□□□□ 0.3
TRIM27-207ENST00000498117 ABCC12Q96J65 1359 aa16.91■□□□□ 0.3
TRIM27-207ENST00000498117 PDE4DIPQ5VU43 2346 aa16.91■□□□□ 0.3
TRIM27-207ENST00000498117 PGAP2Q9UHJ9 254 aa16.91■□□□□ 0.3
TRIM27-207ENST00000498117 COL3A1P02461 1466 aaPredicted RBP16.91■□□□□ 0.3
TRIM27-207ENST00000498117 CASP8AP2Q9UKL3 1982 aa16.91■□□□□ 0.3
TRIM27-207ENST00000498117 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
TRIM27-207ENST00000498117 PPEF1O14829 653 aaPredicted RBP16.9■□□□□ 0.3
TRIM27-207ENST00000498117 CIAPIN1Q6FI81 312 aa16.9■□□□□ 0.3
TRIM27-207ENST00000498117 MCM10Q7L590 875 aa16.9■□□□□ 0.3
TRIM27-207ENST00000498117 ZC3H15Q8WU90 426 aaKnown RBP16.9■□□□□ 0.3
TRIM27-207ENST00000498117 GLIS2Q9BZE0 524 aaPredicted RBP16.9■□□□□ 0.3
TRIM27-207ENST00000498117 RSPH6AQ9H0K4 717 aa16.9■□□□□ 0.3
TRIM27-207ENST00000498117 CXCL9Q07325 125 aa16.89■□□□□ 0.29
TRIM27-207ENST00000498117 NOGQ13253 232 aa16.89■□□□□ 0.29
TRIM27-207ENST00000498117 AOC3Q16853 763 aa16.89■□□□□ 0.29
TRIM27-207ENST00000498117 NGEFQ8N5V2 710 aa16.89■□□□□ 0.29
TRIM27-207ENST00000498117 ZNF408Q9H9D4 720 aa16.89■□□□□ 0.29
TRIM27-207ENST00000498117 ZNRF3Q9ULT6 936 aa16.89■□□□□ 0.29
TRIM27-207ENST00000498117 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.29
TRIM27-207ENST00000498117 HTATSF1O43719 755 aaKnown RBP16.88■□□□□ 0.29
TRIM27-207ENST00000498117 KIF6Q6ZMV9 814 aa16.88■□□□□ 0.29
TRIM27-207ENST00000498117 CDC37L1Q7L3B6 337 aa16.88■□□□□ 0.29
TRIM27-207ENST00000498117 SUPT20HQ8NEM7 779 aa16.88■□□□□ 0.29
TRIM27-207ENST00000498117 MAP3K15Q6ZN16 1313 aa16.88■□□□□ 0.29
TRIM27-207ENST00000498117 RIC1Q4ADV7 1423 aa16.87■□□□□ 0.29
TRIM27-207ENST00000498117 GMPSP49915 693 aaPredicted RBP16.87■□□□□ 0.29
TRIM27-207ENST00000498117 TAF7Q15545 349 aaPredicted RBP16.87■□□□□ 0.29
TRIM27-207ENST00000498117 CFAP53Q96M91 514 aa16.87■□□□□ 0.29
TRIM27-207ENST00000498117 NUDCQ9Y266 331 aa16.87■□□□□ 0.29
TRIM27-207ENST00000498117 ATP6V0A2Q9Y487 856 aa16.87■□□□□ 0.29
TRIM27-207ENST00000498117 IBTKQ9P2D0 1353 aaPredicted RBP16.87■□□□□ 0.29
TRIM27-207ENST00000498117 GPTP24298 496 aa16.86■□□□□ 0.29
TRIM27-207ENST00000498117 CNGB1Q14028 1251 aaPredicted RBP16.86■□□□□ 0.29
TRIM27-207ENST00000498117 SUSD4Q5VX71 490 aa16.86■□□□□ 0.29
TRIM27-207ENST00000498117 NLRP3Q96P20 1036 aa16.86■□□□□ 0.29
TRIM27-207ENST00000498117 BCL2L13Q9BXK5 485 aa16.86■□□□□ 0.29
TRIM27-207ENST00000498117 PCGF6Q9BYE7 350 aa16.86■□□□□ 0.29
TRIM27-207ENST00000498117 CDHR2Q9BYE9 1310 aa16.86■□□□□ 0.29
TRIM27-207ENST00000498117 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
TRIM27-207ENST00000498117 TNIP1Q15025 636 aa16.85■□□□□ 0.29
TRIM27-207ENST00000498117 PPP1R42Q7Z4L9 355 aa16.85■□□□□ 0.29
TRIM27-207ENST00000498117 RTFDC1Q9BY42 306 aaPredicted RBP16.85■□□□□ 0.29
TRIM27-207ENST00000498117 RRP7AQ9Y3A4 280 aaKnown RBP16.85■□□□□ 0.29
TRIM27-207ENST00000498117 HIRAP54198 1017 aaPredicted RBP16.84■□□□□ 0.29
TRIM27-207ENST00000498117 HUNKP57058 714 aa16.84■□□□□ 0.29
TRIM27-207ENST00000498117 TTLL7Q6ZT98 887 aa16.84■□□□□ 0.29
TRIM27-207ENST00000498117 SLC51AQ86UW1 340 aa16.84■□□□□ 0.29
TRIM27-207ENST00000498117 ZNF34Q8IZ26 560 aa16.84■□□□□ 0.29
TRIM27-207ENST00000498117 ZIC5Q96T25 663 aa16.84■□□□□ 0.29
TRIM27-207ENST00000498117 UBN2Q6ZU65 1347 aa16.84■□□□□ 0.29
TRIM27-207ENST00000498117 H7C1D1 291 aa16.83■□□□□ 0.28
TRIM27-207ENST00000498117 U2AF1L5P0DN76 240 aaPredicted RBP16.83■□□□□ 0.28
TRIM27-207ENST00000498117 U2AF1Q01081 240 aaKnown RBP eCLIP16.83■□□□□ 0.281e-11■■■■□ 25.8
TRIM27-207ENST00000498117 ZBTB3Q9H5J0 574 aa16.83■□□□□ 0.28
TRIM27-207ENST00000498117 MIS18AQ9NYP9 233 aa16.83■□□□□ 0.28
TRIM27-207ENST00000498117 TNRC18O15417 2968 aaPredicted RBP16.82■□□□□ 0.28
TRIM27-207ENST00000498117 RAD17O75943 681 aa16.82■□□□□ 0.28
TRIM27-207ENST00000498117 NTSR2O95665 410 aa16.82■□□□□ 0.28
TRIM27-207ENST00000498117 KIAA2012Q0VF49 1180 aa16.82■□□□□ 0.28
TRIM27-207ENST00000498117 PARP10Q53GL7 1025 aa16.82■□□□□ 0.28
TRIM27-207ENST00000498117 DPP8Q6V1X1 898 aaPredicted RBP16.82■□□□□ 0.28
TRIM27-207ENST00000498117 C3orf67Q6ZVT6 689 aa16.82■□□□□ 0.28
TRIM27-207ENST00000498117 USP48Q86UV5 1035 aa16.82■□□□□ 0.28
TRIM27-207ENST00000498117 MPNDQ8N594 471 aa16.82■□□□□ 0.28
TRIM27-207ENST00000498117 PNISRQ8TF01 805 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms