RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 ANAPC15P60006 121 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 FOXD4L5Q5VV16 416 aaPredicted RBP9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 SSH3Q8TE77 659 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 FOXD4L4Q8WXT5 416 aaPredicted RBP9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 DCAF5Q96JK2 942 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 FSD1Q9BTV5 496 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 ECHDC1Q9NTX5 307 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 CSPP1Q1MSJ5 1256 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 DPY19L2Q6NUT2 758 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 MYD88Q99836 296 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 MARCH6O60337 910 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 GIGYF1O75420 1035 aaPredicted RBP9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 KIF3AQ9Y496 699 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 KCNQ3O43525 872 aa9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 ZNF790Q6PG37 636 aa9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 CHMP4CQ96CF2 233 aa9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 SIL1Q9H173 461 aa9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 PSMA5P28066 241 aa9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 LRRFIP1Q32MZ4 808 aaKnown RBP9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 CWC27Q6UX04 472 aaKnown RBP9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 ANKRD13DQ6ZTN6 518 aa9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 DDX46Q7L014 1031 aaKnown RBP9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 CDCA7Q9BWT1 371 aaPredicted RBP9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 NFATC2IPQ8NCF5 419 aa9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 TCEAL9Q9UHQ7 104 aa9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 IGHMBP2P38935 993 aaKnown RBP9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 XAGE3Q8WTP9 111 aa9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 SMC3Q9UQE7 1217 aa9.56□□□□□ -0.88
HLA-DMB-262ENST00000498020 CHMLP26374 656 aa9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 CCDC57Q2TAC2 916 aa9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 COPS6Q7L5N1 327 aa9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 TTC41PQ6P2S7 1318 aa9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 IBTKQ9P2D0 1353 aaPredicted RBP9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 BEND3Q5T5X7 828 aa9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 ANTXR1Q9H6X2 564 aa9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 SLC52A2Q9HAB3 445 aa9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 NBPF7P0C2Y1 421 aaPredicted RBP9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 TPM4P67936 248 aa9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 RAB3GAP1Q15042 981 aa9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 EVI5LQ96CN4 794 aa9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 ABCF2Q9UG63 623 aa9.55□□□□□ -0.88
HLA-DMB-262ENST00000498020 SSFA2P28290 1259 aa9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 CWF19L2Q2TBE0 894 aaKnown RBP9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 OGFOD1Q8N543 542 aa9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 NIP7Q9Y221 180 aaKnown RBP eCLIP9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 ERBB3P21860 1342 aa9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 NSFL1CQ9UNZ2 370 aaKnown RBP9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 NCAPD2Q15021 1401 aa9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 MON2Q7Z3U7 1717 aa9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 EPB41L2O43491 1005 aaKnown RBP9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 UPF3BQ9BZI7 483 aaKnown RBP9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 STAP2Q9UGK3 403 aa9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 CYP46A1Q9Y6A2 500 aa9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.54□□□□□ -0.88
HLA-DMB-262ENST00000498020 MBD3O95983 291 aa9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 STK11IPQ8N1F8 1099 aa9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 CNKSR2Q8WXI2 1034 aa9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 BRPF3Q9ULD4 1205 aa9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 A0A087WZG4 1122 aa9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 JCADQ9P266 1359 aa9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 RASSF8Q8NHQ8 419 aa9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 F8W031 263 aaPredicted RBP9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 PHKG2P15735 406 aa9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 WASHC4Q2M389 1173 aa9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 CCDC8Q9H0W5 538 aaPredicted RBP9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 GNL3LQ9NVN8 582 aaKnown RBP9.53□□□□□ -0.88
HLA-DMB-262ENST00000498020 NF2P35240 595 aa9.52□□□□□ -0.88
HLA-DMB-262ENST00000498020 PRKG1Q13976 671 aa9.52□□□□□ -0.88
HLA-DMB-262ENST00000498020 TPTE2Q6XPS3 522 aa9.52□□□□□ -0.88
HLA-DMB-262ENST00000498020 ZSCAN31Q96LW9 406 aaPredicted RBP9.52□□□□□ -0.88
HLA-DMB-262ENST00000498020 NLRP3Q96P20 1036 aa9.52□□□□□ -0.88
HLA-DMB-262ENST00000498020 WDR33Q9C0J8 1336 aaKnown RBP9.52□□□□□ -0.88
HLA-DMB-262ENST00000498020 CCDC87Q9NVE4 849 aa9.52□□□□□ -0.88
HLA-DMB-262ENST00000498020 PRPF40AO75400 957 aaKnown RBP9.52□□□□□ -0.89
HLA-DMB-262ENST00000498020 BAG4O95429 457 aaKnown RBP9.52□□□□□ -0.89
HLA-DMB-262ENST00000498020 ATP10DQ9P241 1426 aa9.52□□□□□ -0.89
HLA-DMB-262ENST00000498020 H0YIN7 160 aa9.52□□□□□ -0.89
HLA-DMB-262ENST00000498020 RIMBP2O15034 1052 aa9.52□□□□□ -0.89
HLA-DMB-262ENST00000498020 TMX3Q96JJ7 454 aa9.52□□□□□ -0.89
HLA-DMB-262ENST00000498020 BOLA2Q9H3K6 86 aa9.52□□□□□ -0.89
HLA-DMB-262ENST00000498020 CAPN15O75808 1086 aa9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 UBE3BQ7Z3V4 1068 aa9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 METTL22Q9BUU2 404 aaPredicted RBP9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 PA2G4Q9UQ80 394 aaKnown RBP9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 NRKQ7Z2Y5 1582 aa9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 ATP5J2-PTCD1G3V325 749 aa9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 DNAJC2Q99543 621 aaKnown RBP9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 CEMIPQ8WUJ3 1361 aa9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 ZNF496Q96IT1 587 aaPredicted RBP9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 JAKMIP1Q96N16 626 aaKnown RBP9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 TEX13AQ9BXU3 409 aaPredicted RBP9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 ZC3H12CQ9C0D7 883 aaKnown RBP9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 ANKRD1Q15327 319 aa9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 FOXD4L6Q3SYB3 417 aaPredicted RBP9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 CAVIN1Q6NZI2 390 aaKnown RBP9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 FOXD4L3Q6VB84 417 aaPredicted RBP9.51□□□□□ -0.89
HLA-DMB-262ENST00000498020 LARGE2Q8N3Y3 721 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms