RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 HSPA1AP0DMV8 641 aaKnown RBP12.59□□□□□ -0.39
PTPN3-206ENST00000497739 HSPA1BP0DMV9 641 aaKnown RBP12.59□□□□□ -0.39
PTPN3-206ENST00000497739 TEFQ10587 303 aa12.59□□□□□ -0.39
PTPN3-206ENST00000497739 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTPN3-206ENST00000497739 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
PTPN3-206ENST00000497739 BCL2L12Q9HB09 334 aa12.59□□□□□ -0.39
PTPN3-206ENST00000497739 TIAM2Q8IVF5 1701 aa12.59□□□□□ -0.39
PTPN3-206ENST00000497739 GLTPD2A6NH11 291 aa12.58□□□□□ -0.4
PTPN3-206ENST00000497739 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
PTPN3-206ENST00000497739 LMNB1P20700 586 aa12.58□□□□□ -0.4
PTPN3-206ENST00000497739 NFIXQ14938 502 aa12.58□□□□□ -0.4
PTPN3-206ENST00000497739 CAMK2BQ13554 666 aa12.57□□□□□ -0.4
PTPN3-206ENST00000497739 MTHFSDQ2M296 383 aaKnown RBP12.57□□□□□ -0.4
PTPN3-206ENST00000497739 USPL1Q5W0Q7 1092 aa12.57□□□□□ -0.4
PTPN3-206ENST00000497739 DNAJC10Q8IXB1 793 aa12.57□□□□□ -0.4
PTPN3-206ENST00000497739 TTC5Q8N0Z6 440 aa12.57□□□□□ -0.4
PTPN3-206ENST00000497739 COL15A1P39059 1388 aa12.56□□□□□ -0.4
PTPN3-206ENST00000497739 AFDNP55196 1824 aaKnown RBP12.56□□□□□ -0.4
PTPN3-206ENST00000497739 CYP19A1P11511 503 aaPredicted RBP12.56□□□□□ -0.4
PTPN3-206ENST00000497739 VEGFAP15692 232 aaPredicted RBP12.56□□□□□ -0.4
PTPN3-206ENST00000497739 ANP32CO43423 234 aa12.55□□□□□ -0.4
PTPN3-206ENST00000497739 HOXB3P14651 431 aaPredicted RBP12.55□□□□□ -0.4
PTPN3-206ENST00000497739 RSPH6AQ9H0K4 717 aa12.55□□□□□ -0.4
PTPN3-206ENST00000497739 SLC52A2Q9HAB3 445 aa12.55□□□□□ -0.4
PTPN3-206ENST00000497739 NARFQ9UHQ1 456 aa12.55□□□□□ -0.4
PTPN3-206ENST00000497739 RNMTO43148 476 aaKnown RBP12.54□□□□□ -0.4
PTPN3-206ENST00000497739 ZBTB1Q9Y2K1 713 aa12.54□□□□□ -0.4
PTPN3-206ENST00000497739 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
PTPN3-206ENST00000497739 ZPR1O75312 459 aa12.53□□□□□ -0.4
PTPN3-206ENST00000497739 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
PTPN3-206ENST00000497739 COL11A2P13942 1736 aaPredicted RBP12.53□□□□□ -0.4
PTPN3-206ENST00000497739 UBR2Q8IWV8 1755 aa12.52□□□□□ -0.41
PTPN3-206ENST00000497739 SERPINB2P05120 415 aa12.52□□□□□ -0.41
PTPN3-206ENST00000497739 NPM2Q86SE8 214 aaKnown RBP12.52□□□□□ -0.41
PTPN3-206ENST00000497739 C2CD5Q86YS7 1000 aa12.52□□□□□ -0.41
PTPN3-206ENST00000497739 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
PTPN3-206ENST00000497739 PRKRIP1Q9H875 184 aaPredicted RBP12.52□□□□□ -0.41
PTPN3-206ENST00000497739 LGR6Q9HBX8 967 aa12.52□□□□□ -0.41
PTPN3-206ENST00000497739 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
PTPN3-206ENST00000497739 SLC34A2O95436 690 aa12.51□□□□□ -0.41
PTPN3-206ENST00000497739 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
PTPN3-206ENST00000497739 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
PTPN3-206ENST00000497739 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
PTPN3-206ENST00000497739 LMOD3Q0VAK6 560 aa12.5□□□□□ -0.41
PTPN3-206ENST00000497739 E2F4Q16254 413 aa12.5□□□□□ -0.41
PTPN3-206ENST00000497739 PHACTR3Q96KR7 559 aa12.5□□□□□ -0.41
PTPN3-206ENST00000497739 CNTNAP1P78357 1384 aa12.49□□□□□ -0.41
PTPN3-206ENST00000497739 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
PTPN3-206ENST00000497739 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
PTPN3-206ENST00000497739 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
PTPN3-206ENST00000497739 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
PTPN3-206ENST00000497739 PASKQ96RG2 1323 aa12.48□□□□□ -0.41
PTPN3-206ENST00000497739 BTBD11A6QL63 1104 aa12.48□□□□□ -0.41
PTPN3-206ENST00000497739 H0YIN7 160 aa12.48□□□□□ -0.41
PTPN3-206ENST00000497739 EIF5P55010 431 aaKnown RBP12.48□□□□□ -0.41
PTPN3-206ENST00000497739 FOXN1O15353 648 aa12.47□□□□□ -0.41
PTPN3-206ENST00000497739 NFE2L2Q16236 605 aa12.47□□□□□ -0.41
PTPN3-206ENST00000497739 TBC1D9BQ66K14 1250 aa12.47□□□□□ -0.41
PTPN3-206ENST00000497739 PRR5LQ6MZQ0 368 aa12.47□□□□□ -0.41
PTPN3-206ENST00000497739 MCM10Q7L590 875 aa12.47□□□□□ -0.41
PTPN3-206ENST00000497739 MKRN1Q9UHC7 482 aaKnown RBP12.47□□□□□ -0.41
PTPN3-206ENST00000497739 C21orf2O43822 256 aa12.46□□□□□ -0.41
PTPN3-206ENST00000497739 STARD3NLO95772 234 aa12.46□□□□□ -0.41
PTPN3-206ENST00000497739 NBR1Q14596 966 aa12.46□□□□□ -0.41
PTPN3-206ENST00000497739 ERFEQ4G0M1 354 aa12.46□□□□□ -0.41
PTPN3-206ENST00000497739 KCNV2Q8TDN2 545 aa12.46□□□□□ -0.41
PTPN3-206ENST00000497739 OXER1Q8TDS5 423 aa12.46□□□□□ -0.41
PTPN3-206ENST00000497739 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.41
PTPN3-206ENST00000497739 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
PTPN3-206ENST00000497739 FMNL2Q96PY5 1086 aa12.46□□□□□ -0.41
PTPN3-206ENST00000497739 BRIP1Q9BX63 1249 aa12.46□□□□□ -0.41
PTPN3-206ENST00000497739 TEX13AQ9BXU3 409 aaPredicted RBP12.46□□□□□ -0.41
PTPN3-206ENST00000497739 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.41
PTPN3-206ENST00000497739 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
PTPN3-206ENST00000497739 ZNF790Q6PG37 636 aa12.45□□□□□ -0.42
PTPN3-206ENST00000497739 IL17REQ8NFR9 667 aa12.45□□□□□ -0.42
PTPN3-206ENST00000497739 RUNDC1Q96C34 613 aa12.45□□□□□ -0.42
PTPN3-206ENST00000497739 ADAMTSL1Q8N6G6 1762 aa12.45□□□□□ -0.42
PTPN3-206ENST00000497739 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
PTPN3-206ENST00000497739 CCDC88AQ3V6T2 1871 aa12.44□□□□□ -0.42
PTPN3-206ENST00000497739 CEMIPQ8WUJ3 1361 aa12.44□□□□□ -0.42
PTPN3-206ENST00000497739 DDNO94850 711 aaPredicted RBP12.44□□□□□ -0.42
PTPN3-206ENST00000497739 RIPK4P57078 832 aa12.44□□□□□ -0.42
PTPN3-206ENST00000497739 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
PTPN3-206ENST00000497739 BICDL1Q6ZP65 573 aa12.44□□□□□ -0.42
PTPN3-206ENST00000497739 CCDC146Q8IYE0 955 aa12.44□□□□□ -0.42
PTPN3-206ENST00000497739 CCDC24Q8N4L8 307 aa12.44□□□□□ -0.42
PTPN3-206ENST00000497739 TAOK3Q9H2K8 898 aa12.44□□□□□ -0.42
PTPN3-206ENST00000497739 MRS2Q9HD23 443 aa12.44□□□□□ -0.42
PTPN3-206ENST00000497739 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
PTPN3-206ENST00000497739 ZNF330Q9Y3S2 320 aaPredicted RBP12.44□□□□□ -0.42
PTPN3-206ENST00000497739 SNPHO15079 494 aa12.43□□□□□ -0.42
PTPN3-206ENST00000497739 ITGBL1O95965 494 aaPredicted RBP12.43□□□□□ -0.42
PTPN3-206ENST00000497739 PDE6BP35913 854 aa12.43□□□□□ -0.42
PTPN3-206ENST00000497739 DCTN1Q14203 1278 aa12.43□□□□□ -0.42
PTPN3-206ENST00000497739 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
PTPN3-206ENST00000497739 PRPF40BQ6NWY9 871 aaKnown RBP12.43□□□□□ -0.42
PTPN3-206ENST00000497739 C7orf43Q8WVR3 580 aa12.43□□□□□ -0.42
PTPN3-206ENST00000497739 ZNF496Q96IT1 587 aaPredicted RBP12.43□□□□□ -0.42
PTPN3-206ENST00000497739 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms