RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 PRPF40BQ6NWY9 871 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-214ENST00000497677 C3orf67Q6ZVT6 689 aa20.57■□□□□ 0.88
CTDSP1-214ENST00000497677 SYNE4Q8N205 404 aa20.57■□□□□ 0.88
CTDSP1-214ENST00000497677 NUP98P52948 1817 aa20.57■□□□□ 0.88
CTDSP1-214ENST00000497677 TCERG1O14776 1098 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-214ENST00000497677 EXOSC9Q06265 439 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-214ENST00000497677 GOLGA2Q08379 1002 aa20.56■□□□□ 0.88
CTDSP1-214ENST00000497677 TRIM28Q13263 835 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-214ENST00000497677 C9orf131Q5VYM1 1079 aa20.56■□□□□ 0.88
CTDSP1-214ENST00000497677 RIC1Q4ADV7 1423 aa20.55■□□□□ 0.88
CTDSP1-214ENST00000497677 ATP5J2-PTCD1G3V325 749 aa20.55■□□□□ 0.88
CTDSP1-214ENST00000497677 NFKBIEO00221 500 aa20.55■□□□□ 0.88
CTDSP1-214ENST00000497677 HOXA10P31260 410 aaPredicted RBP20.55■□□□□ 0.88
CTDSP1-214ENST00000497677 RASSF7Q02833 373 aa20.55■□□□□ 0.88
CTDSP1-214ENST00000497677 RNF123Q5XPI4 1314 aa20.54■□□□□ 0.88
CTDSP1-214ENST00000497677 DLEC1Q9Y238 1755 aa20.54■□□□□ 0.88
CTDSP1-214ENST00000497677 COL11A2P13942 1736 aaPredicted RBP20.54■□□□□ 0.88
CTDSP1-214ENST00000497677 RIC3Q7Z5B4 369 aa20.54■□□□□ 0.88
CTDSP1-214ENST00000497677 MYH16Q9H6N6 1097 aa20.54■□□□□ 0.88
CTDSP1-214ENST00000497677 ZNF219Q9P2Y4 722 aaPredicted RBP20.54■□□□□ 0.88
CTDSP1-214ENST00000497677 ARFGEF1Q9Y6D6 1849 aa20.54■□□□□ 0.88
CTDSP1-214ENST00000497677 G2E3Q7L622 706 aa20.53■□□□□ 0.88
CTDSP1-214ENST00000497677 ZNF428Q96B54 188 aa20.53■□□□□ 0.88
CTDSP1-214ENST00000497677 TRMT112Q9UI30 125 aaKnown RBP20.53■□□□□ 0.88
CTDSP1-214ENST00000497677 SLC4A2P04920 1241 aa20.52■□□□□ 0.88
CTDSP1-214ENST00000497677 ALDH1B1P30837 517 aa20.52■□□□□ 0.88
CTDSP1-214ENST00000497677 NLRP3Q96P20 1036 aa20.52■□□□□ 0.88
CTDSP1-214ENST00000497677 STK31Q9BXU1 1019 aa20.52■□□□□ 0.88
CTDSP1-214ENST00000497677 HCLS1P14317 486 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-214ENST00000497677 METTL22Q9BUU2 404 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-214ENST00000497677 RNF181Q9P0P0 153 aa20.51■□□□□ 0.87
CTDSP1-214ENST00000497677 SH3TC1Q8TE82 1336 aa20.51■□□□□ 0.87
CTDSP1-214ENST00000497677 LMNB1P20700 586 aa20.5■□□□□ 0.87
CTDSP1-214ENST00000497677 OLFM4Q6UX06 510 aa20.5■□□□□ 0.87
CTDSP1-214ENST00000497677 KSR2Q6VAB6 950 aa20.5■□□□□ 0.87
CTDSP1-214ENST00000497677 CRAMP1Q96RY5 1269 aa20.5■□□□□ 0.87
CTDSP1-214ENST00000497677 TNRC6CQ9HCJ0 1690 aaKnown RBP20.49■□□□□ 0.87
CTDSP1-214ENST00000497677 PI4KAP2A4QPH2 592 aa20.49■□□□□ 0.87
CTDSP1-214ENST00000497677 DDX58O95786 925 aaKnown RBP20.49■□□□□ 0.87
CTDSP1-214ENST00000497677 SOGA3Q5TF21 947 aa20.49■□□□□ 0.87
CTDSP1-214ENST00000497677 PI4KAP1Q8N8J0 262 aa20.49■□□□□ 0.87
CTDSP1-214ENST00000497677 FAM89AQ96GI7 184 aa20.49■□□□□ 0.87
CTDSP1-214ENST00000497677 MYD88Q99836 296 aa20.49■□□□□ 0.87
CTDSP1-214ENST00000497677 MAP3K2Q9Y2U5 619 aa20.49■□□□□ 0.87
CTDSP1-214ENST00000497677 LTBP3Q9NS15 1303 aa20.49■□□□□ 0.87
CTDSP1-214ENST00000497677 SLX4Q8IY92 1834 aa20.48■□□□□ 0.87
CTDSP1-214ENST00000497677 RPGRQ92834 1020 aaKnown RBP20.48■□□□□ 0.87
CTDSP1-214ENST00000497677 SLFN5Q08AF3 891 aa20.47■□□□□ 0.87
CTDSP1-214ENST00000497677 CCDC191Q8NCU4 936 aa20.47■□□□□ 0.87
CTDSP1-214ENST00000497677 ZNF526Q8TF50 670 aaPredicted RBP20.47■□□□□ 0.87
CTDSP1-214ENST00000497677 RBM17Q96I25 401 aaKnown RBP20.47■□□□□ 0.87
CTDSP1-214ENST00000497677 GPBP1L1Q9HC44 474 aaPredicted RBP20.47■□□□□ 0.87
CTDSP1-214ENST00000497677 E9PSI1 815 aa20.46■□□□□ 0.87
CTDSP1-214ENST00000497677 IGKV5-2P06315 115 aa20.46■□□□□ 0.87
CTDSP1-214ENST00000497677 FLIIQ13045 1269 aa20.46■□□□□ 0.87
CTDSP1-214ENST00000497677 CCDC93Q567U6 631 aa20.46■□□□□ 0.87
CTDSP1-214ENST00000497677 SLC51AQ86UW1 340 aa20.46■□□□□ 0.87
CTDSP1-214ENST00000497677 ZBTB38Q8NAP3 1195 aaPredicted RBP20.46■□□□□ 0.87
CTDSP1-214ENST00000497677 TAOK3Q9H2K8 898 aa20.46■□□□□ 0.87
CTDSP1-214ENST00000497677 RTL5Q5HYW3 569 aaPredicted RBP20.45■□□□□ 0.86
CTDSP1-214ENST00000497677 CDCA7LQ96GN5 454 aa20.45■□□□□ 0.86
CTDSP1-214ENST00000497677 SNED1Q8TER0 1413 aa20.44■□□□□ 0.86
CTDSP1-214ENST00000497677 HNRNPUQ00839 825 aaKnown RBP eCLIP20.44■□□□□ 0.86
CTDSP1-214ENST00000497677 SF3B3Q15393 1217 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-214ENST00000497677 TRMT2AQ8IZ69 625 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-214ENST00000497677 RTKN2Q8IZC4 609 aa20.44■□□□□ 0.86
CTDSP1-214ENST00000497677 IRS4O14654 1257 aaPredicted RBP20.43■□□□□ 0.86
CTDSP1-214ENST00000497677 PCCAP05165 728 aaPredicted RBP20.43■□□□□ 0.86
CTDSP1-214ENST00000497677 CC2D2BQ6DHV5 1058 aa20.43■□□□□ 0.86
CTDSP1-214ENST00000497677 CWC25Q9NXE8 425 aaPredicted RBP20.43■□□□□ 0.86
CTDSP1-214ENST00000497677 ABCC4O15439 1325 aa20.43■□□□□ 0.86
CTDSP1-214ENST00000497677 ZC3H4Q9UPT8 1303 aaKnown RBP20.43■□□□□ 0.86
CTDSP1-214ENST00000497677 ANKRD36CQ5JPF3 1778 aa20.42■□□□□ 0.86
CTDSP1-214ENST00000497677 KIF3CO14782 793 aa20.42■□□□□ 0.86
CTDSP1-214ENST00000497677 FKBP4Q02790 459 aaKnown RBP eCLIP20.42■□□□□ 0.862e-6■■■■□ 22.8
CTDSP1-214ENST00000497677 NEURL1BA8MQ27 555 aa20.41■□□□□ 0.86
CTDSP1-214ENST00000497677 PPEF1O14829 653 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-214ENST00000497677 BBOX1O75936 387 aa20.41■□□□□ 0.86
CTDSP1-214ENST00000497677 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-214ENST00000497677 CWF19L2Q2TBE0 894 aaKnown RBP20.41■□□□□ 0.86
CTDSP1-214ENST00000497677 JARID2Q92833 1246 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-214ENST00000497677 DDX46Q7L014 1031 aaKnown RBP20.4■□□□□ 0.86
CTDSP1-214ENST00000497677 PSMD1Q99460 953 aa20.4■□□□□ 0.86
CTDSP1-214ENST00000497677 NMRK2Q9NPI5 230 aa20.4■□□□□ 0.86
CTDSP1-214ENST00000497677 ZNF277Q9NRM2 450 aaPredicted RBP20.4■□□□□ 0.86
CTDSP1-214ENST00000497677 ATP6V0A2Q9Y487 856 aa20.4■□□□□ 0.86
CTDSP1-214ENST00000497677 ARFGEF2Q9Y6D5 1785 aa20.39■□□□□ 0.86
CTDSP1-214ENST00000497677 ZBED9Q6R2W3 1325 aa20.39■□□□□ 0.85
CTDSP1-214ENST00000497677 NEXNQ0ZGT2 675 aa20.39■□□□□ 0.85
CTDSP1-214ENST00000497677 GRAPQ13588 217 aa20.39■□□□□ 0.85
CTDSP1-214ENST00000497677 GRAPLQ8TC17 118 aaPredicted RBP20.39■□□□□ 0.85
CTDSP1-214ENST00000497677 DNAAF4Q8WXU2 420 aa20.39■□□□□ 0.85
CTDSP1-214ENST00000497677 SBF1O95248 1867 aa20.39■□□□□ 0.85
CTDSP1-214ENST00000497677 FER1L6Q2WGJ9 1857 aa20.39■□□□□ 0.85
CTDSP1-214ENST00000497677 GLTPD2A6NH11 291 aa20.38■□□□□ 0.85
CTDSP1-214ENST00000497677 C1QTNF8P60827 252 aa20.38■□□□□ 0.85
CTDSP1-214ENST00000497677 GRIPAP1Q4V328 841 aa20.38■□□□□ 0.85
CTDSP1-214ENST00000497677 SP8Q8IXZ3 490 aa20.38■□□□□ 0.85
CTDSP1-214ENST00000497677 CDHR2Q9BYE9 1310 aa20.37■□□□□ 0.85
CTDSP1-214ENST00000497677 F6X3S4 739 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms