RNA–Protein interactions for RNA: ENST00000497287.5

GPATCH4-208, Transcript of G-patch domain containing 4, human

TSL 3

Gene GPATCH4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPATCH4-208	ENST00000497287	CASP7	P55210	303 aa		9.09	□□□□□ -0.95
GPATCH4-208	ENST00000497287	MTX1	Q13505	466 aa		9.09	□□□□□ -0.95
GPATCH4-208	ENST00000497287	UBE3B	Q7Z3V4	1068 aa		9.09	□□□□□ -0.95
GPATCH4-208	ENST00000497287	PPP1R42	Q7Z4L9	355 aa		9.09	□□□□□ -0.95
GPATCH4-208	ENST00000497287	PROM2	Q8N271	834 aa		9.09	□□□□□ -0.95
GPATCH4-208	ENST00000497287	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	9.09	□□□□□ -0.95
GPATCH4-208	ENST00000497287	SSH3	Q8TE77	659 aa		9.09	□□□□□ -0.95
GPATCH4-208	ENST00000497287	BICC1	Q9H694	974 aa	Known RBP	9.09	□□□□□ -0.95
GPATCH4-208	ENST00000497287	PDZRN3	Q9UPQ7	1066 aa		9.09	□□□□□ -0.95
GPATCH4-208	ENST00000497287	PNMA6E	A0A0J9YXQ4	647 aa		9.08	□□□□□ -0.96
GPATCH4-208	ENST00000497287	HSP90B1	P14625	803 aa	Known RBP	9.08	□□□□□ -0.96
GPATCH4-208	ENST00000497287	BAG6	P46379	1132 aa		9.08	□□□□□ -0.96
GPATCH4-208	ENST00000497287	POLA2	Q14181	598 aa		9.08	□□□□□ -0.96
GPATCH4-208	ENST00000497287	HSP90AB4P	Q58FF6	505 aa		9.08	□□□□□ -0.96
GPATCH4-208	ENST00000497287	ARHGEF1	Q92888	912 aa	Known RBP	9.08	□□□□□ -0.96
GPATCH4-208	ENST00000497287	UTP14A	Q9BVJ6	771 aa	Known RBP	9.08	□□□□□ -0.96
GPATCH4-208	ENST00000497287	TRMT112	Q9UI30	125 aa	Known RBP	9.08	□□□□□ -0.96
GPATCH4-208	ENST00000497287	NIP7	Q9Y221	180 aa	Known RBP eCLIP	9.08	□□□□□ -0.96
GPATCH4-208	ENST00000497287	ANKRD36C	Q5JPF3	1778 aa		9.08	□□□□□ -0.96
GPATCH4-208	ENST00000497287	TNS1	Q9HBL0	1735 aa	Known RBP	9.08	□□□□□ -0.96
GPATCH4-208	ENST00000497287	CDHR2	Q9BYE9	1310 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	RGPD3	A6NKT7	1758 aa	Predicted RBP	9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	RGPD4	Q7Z3J3	1758 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	RAB11FIP3	O75154	756 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	PHF14	O94880	888 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	NUCB1	Q02818	461 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	EN1	Q05925	392 aa	Predicted RBP	9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	RABL6	Q3YEC7	729 aa	Predicted RBP	9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	ANKRD45	Q5TZF3	282 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	USPL1	Q5W0Q7	1092 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	CHD1L	Q86WJ1	897 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	FLAD1	Q8NFF5	587 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	JARID2	Q92833	1246 aa	Predicted RBP	9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	KAZALD1	Q96I82	304 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	PLA2G12B	Q9BX93	195 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	SRCAP	Q6ZRS2	3230 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	BCOR	Q6W2J9	1755 aa		9.07	□□□□□ -0.96
GPATCH4-208	ENST00000497287	UBN2	Q6ZU65	1347 aa		9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	USP42	Q9H9J4	1324 aa	Known RBP	9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	SURF6	O75683	361 aa	Known RBP	9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	RTL5	Q5HYW3	569 aa	Predicted RBP	9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	SUSD4	Q5VX71	490 aa		9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	AKT1S1	Q96B36	256 aa		9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	FAM89A	Q96GI7	184 aa		9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	CAMKK2	Q96RR4	588 aa		9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	SETDB2	Q96T68	719 aa		9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	NYX	Q9GZU5	481 aa		9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	TFCP2L1	Q9NZI6	479 aa		9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	SRP68	Q9UHB9	627 aa	Known RBP	9.06	□□□□□ -0.96
GPATCH4-208	ENST00000497287	SH3TC1	Q8TE82	1336 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	UBR3	Q6ZT12	1888 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	SCN7A	Q01118	1682 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	IRS4	O14654	1257 aa	Predicted RBP	9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	PDE8A	O60658	829 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	RGS3	P49796	1198 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	FOXO4	P98177	505 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	G3BP1	Q13283	466 aa	Known RBP eCLIP	9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	OS9	Q13438	667 aa	Predicted RBP	9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	EZH2	Q15910	746 aa	Known RBP	9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	EPHA10	Q5JZY3	1008 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	LMBR1L	Q6UX01	489 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	SMIM5	Q71RC9	77 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	AMIGO3	Q86WK7	504 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	ERC1	Q8IUD2	1116 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	LNPK	Q9C0E8	428 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	BCL2L12	Q9HB09	334 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	EXOC6B	Q9Y2D4	811 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	NOP58	Q9Y2X3	529 aa	Known RBP	9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	CHMP3	Q9Y3E7	222 aa		9.05	□□□□□ -0.96
GPATCH4-208	ENST00000497287	FAM177B	A6PVY3	158 aa		9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	APBB1	O00213	710 aa		9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	NTSR2	O95665	410 aa		9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	CSF1R	P07333	972 aa		9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	GTF2E1	P29083	439 aa	Predicted RBP	9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	ZNF827	Q17R98	1081 aa		9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	TBC1D9B	Q66K14	1250 aa		9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	BICDL1	Q6ZP65	573 aa		9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	KIF1BP	Q96EK5	621 aa		9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	LRRCC1	Q9C099	1032 aa		9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	COPRS	Q9NQ92	184 aa		9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	STK32B	Q9NY57	414 aa		9.04	□□□□□ -0.96
GPATCH4-208	ENST00000497287	CTSW	P56202	376 aa		9.03	□□□□□ -0.96
GPATCH4-208	ENST00000497287	CCDC57	Q2TAC2	916 aa		9.03	□□□□□ -0.96
GPATCH4-208	ENST00000497287	TPTE2	Q6XPS3	522 aa		9.03	□□□□□ -0.96
GPATCH4-208	ENST00000497287	NBPF5P	Q86XG9	351 aa	Predicted RBP	9.03	□□□□□ -0.96
GPATCH4-208	ENST00000497287	PA2G4	Q9UQ80	394 aa	Known RBP	9.03	□□□□□ -0.96
GPATCH4-208	ENST00000497287	C4A	P0C0L4	1744 aa		9.02	□□□□□ -0.96
GPATCH4-208	ENST00000497287	CARMIL3	Q8ND23	1372 aa		9.02	□□□□□ -0.97
GPATCH4-208	ENST00000497287	PSD	A5PKW4	1024 aa	Predicted RBP	9.02	□□□□□ -0.97
GPATCH4-208	ENST00000497287	MSH5	O43196	834 aa		9.02	□□□□□ -0.97
GPATCH4-208	ENST00000497287	SMARCA5	O60264	1052 aa	Predicted RBP	9.02	□□□□□ -0.97
GPATCH4-208	ENST00000497287	GYS1	P13807	737 aa		9.02	□□□□□ -0.97
GPATCH4-208	ENST00000497287	HCLS1	P14317	486 aa	Predicted RBP	9.02	□□□□□ -0.97
GPATCH4-208	ENST00000497287	PDE4A	P27815	886 aa		9.02	□□□□□ -0.97
GPATCH4-208	ENST00000497287	RFX5	P48382	616 aa	Predicted RBP	9.02	□□□□□ -0.97
GPATCH4-208	ENST00000497287	PTPN12	Q05209	780 aa	Known RBP	9.02	□□□□□ -0.97
GPATCH4-208	ENST00000497287	IFIT5	Q13325	482 aa	Known RBP	9.02	□□□□□ -0.97
GPATCH4-208	ENST00000497287	SLC15A2	Q16348	729 aa		9.02	□□□□□ -0.97
GPATCH4-208	ENST00000497287	CCDC152	Q4G0S7	254 aa		9.02	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms