RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, human

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC142-209	ENST00000497232	ZPR1	O75312	459 aa		13.84	□□□□□ -0.19
CCDC142-209	ENST00000497232	NFIX	Q14938	502 aa		13.84	□□□□□ -0.19
CCDC142-209	ENST00000497232	SUSD4	Q5VX71	490 aa		13.84	□□□□□ -0.19
CCDC142-209	ENST00000497232	KAZALD1	Q96I82	304 aa		13.84	□□□□□ -0.19
CCDC142-209	ENST00000497232	ZBTB40	Q9NUA8	1239 aa		13.84	□□□□□ -0.19
CCDC142-209	ENST00000497232		U3KPZ7	1027 aa	Predicted RBP	13.84	□□□□□ -0.19
CCDC142-209	ENST00000497232	AFDN	P55196	1824 aa	Known RBP	13.84	□□□□□ -0.19
CCDC142-209	ENST00000497232	NTSR2	O95665	410 aa		13.83	□□□□□ -0.2
CCDC142-209	ENST00000497232	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.83	□□□□□ -0.2
CCDC142-209	ENST00000497232	IRX6	P78412	446 aa	Predicted RBP	13.83	□□□□□ -0.2
CCDC142-209	ENST00000497232	DDR1	Q08345	913 aa		13.83	□□□□□ -0.2
CCDC142-209	ENST00000497232	FTSJ3	Q8IY81	847 aa	Known RBP	13.83	□□□□□ -0.2
CCDC142-209	ENST00000497232	EXOC6	Q8TAG9	804 aa		13.83	□□□□□ -0.2
CCDC142-209	ENST00000497232	MEIS3	Q99687	375 aa		13.83	□□□□□ -0.2
CCDC142-209	ENST00000497232	SOCS7	O14512	581 aa		13.82	□□□□□ -0.2
CCDC142-209	ENST00000497232	GPT	P24298	496 aa		13.82	□□□□□ -0.2
CCDC142-209	ENST00000497232	NEXN	Q0ZGT2	675 aa		13.82	□□□□□ -0.2
CCDC142-209	ENST00000497232	PARP10	Q53GL7	1025 aa		13.82	□□□□□ -0.2
CCDC142-209	ENST00000497232	CWC25	Q9NXE8	425 aa	Predicted RBP	13.82	□□□□□ -0.2
CCDC142-209	ENST00000497232	DDX19B	Q9UMR2	479 aa		13.82	□□□□□ -0.2
CCDC142-209	ENST00000497232	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
CCDC142-209	ENST00000497232	ZNF652	Q9Y2D9	606 aa		13.82	□□□□□ -0.2
CCDC142-209	ENST00000497232	GRM8	O00222	908 aa		13.81	□□□□□ -0.2
CCDC142-209	ENST00000497232	POLRMT	O00411	1230 aa	Known RBP	13.81	□□□□□ -0.2
CCDC142-209	ENST00000497232	PCCA	P05165	728 aa	Predicted RBP	13.81	□□□□□ -0.2
CCDC142-209	ENST00000497232	C1QBP	Q07021	282 aa	Known RBP	13.81	□□□□□ -0.2
CCDC142-209	ENST00000497232	NPM2	Q86SE8	214 aa	Known RBP	13.81	□□□□□ -0.2
CCDC142-209	ENST00000497232	ITPRIP	Q8IWB1	547 aa		13.81	□□□□□ -0.2
CCDC142-209	ENST00000497232	SYNE4	Q8N205	404 aa		13.81	□□□□□ -0.2
CCDC142-209	ENST00000497232	NLGN1	Q8N2Q7	840 aa		13.81	□□□□□ -0.2
CCDC142-209	ENST00000497232	SLC16A10	Q8TF71	515 aa		13.81	□□□□□ -0.2
CCDC142-209	ENST00000497232	ARX	Q96QS3	562 aa		13.81	□□□□□ -0.2
CCDC142-209	ENST00000497232	CACNB1	Q02641	598 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC142-209	ENST00000497232	R3HDM1	Q15032	1099 aa	Known RBP	13.8	□□□□□ -0.2
CCDC142-209	ENST00000497232	EPHA10	Q5JZY3	1008 aa		13.8	□□□□□ -0.2
CCDC142-209	ENST00000497232	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC142-209	ENST00000497232	SGIP1	Q9BQI5	828 aa		13.8	□□□□□ -0.2
CCDC142-209	ENST00000497232	CDHR2	Q9BYE9	1310 aa		13.8	□□□□□ -0.2
CCDC142-209	ENST00000497232	DDX60	Q8IY21	1712 aa	Known RBP	13.79	□□□□□ -0.2
CCDC142-209	ENST00000497232	SLC10A5	Q5PT55	438 aa		13.79	□□□□□ -0.2
CCDC142-209	ENST00000497232	JARID2	Q92833	1246 aa	Predicted RBP	13.79	□□□□□ -0.2
CCDC142-209	ENST00000497232	FAM89A	Q96GI7	184 aa		13.79	□□□□□ -0.2
CCDC142-209	ENST00000497232	PLA2G12B	Q9BX93	195 aa		13.79	□□□□□ -0.2
CCDC142-209	ENST00000497232	CARMIL3	Q8ND23	1372 aa		13.79	□□□□□ -0.2
CCDC142-209	ENST00000497232	LAMB2	P55268	1798 aa		13.78	□□□□□ -0.2
CCDC142-209	ENST00000497232	FOXO4	P98177	505 aa		13.78	□□□□□ -0.2
CCDC142-209	ENST00000497232	BICDL1	Q6ZP65	573 aa		13.78	□□□□□ -0.2
CCDC142-209	ENST00000497232	SIRT2	Q8IXJ6	389 aa		13.78	□□□□□ -0.2
CCDC142-209	ENST00000497232	ANKRD44	Q8N8A2	993 aa		13.78	□□□□□ -0.2
CCDC142-209	ENST00000497232	SUCLG2	Q96I99	432 aa		13.78	□□□□□ -0.2
CCDC142-209	ENST00000497232	SETDB2	Q96T68	719 aa		13.78	□□□□□ -0.2
CCDC142-209	ENST00000497232	PCDHB15	Q9Y5E8	787 aa		13.78	□□□□□ -0.2
CCDC142-209	ENST00000497232	ABCC12	Q96J65	1359 aa		13.78	□□□□□ -0.2
CCDC142-209	ENST00000497232	RIC1	Q4ADV7	1423 aa		13.78	□□□□□ -0.2
CCDC142-209	ENST00000497232	SERPINB2	P05120	415 aa		13.77	□□□□□ -0.21
CCDC142-209	ENST00000497232	GNAI3	P08754	354 aa		13.77	□□□□□ -0.21
CCDC142-209	ENST00000497232	MMP10	P09238	476 aa		13.77	□□□□□ -0.21
CCDC142-209	ENST00000497232	AAMP	Q13685	434 aa		13.77	□□□□□ -0.21
CCDC142-209	ENST00000497232	RABL6	Q3YEC7	729 aa	Predicted RBP	13.77	□□□□□ -0.21
CCDC142-209	ENST00000497232	MSL1	Q68DK7	614 aa		13.77	□□□□□ -0.21
CCDC142-209	ENST00000497232	PRR5L	Q6MZQ0	368 aa		13.77	□□□□□ -0.21
CCDC142-209	ENST00000497232	UBE3B	Q7Z3V4	1068 aa		13.77	□□□□□ -0.21
CCDC142-209	ENST00000497232	UTP14A	Q9BVJ6	771 aa	Known RBP	13.77	□□□□□ -0.21
CCDC142-209	ENST00000497232	ANKRD31	Q8N7Z5	1873 aa		13.76	□□□□□ -0.21
CCDC142-209	ENST00000497232	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.76	□□□□□ -0.21
CCDC142-209	ENST00000497232	SH3TC1	Q8TE82	1336 aa		13.76	□□□□□ -0.21
CCDC142-209	ENST00000497232	PSD	A5PKW4	1024 aa	Predicted RBP	13.76	□□□□□ -0.21
CCDC142-209	ENST00000497232	CSF1R	P07333	972 aa		13.76	□□□□□ -0.21
CCDC142-209	ENST00000497232	MTX1	Q13505	466 aa		13.76	□□□□□ -0.21
CCDC142-209	ENST00000497232	ERFE	Q4G0M1	354 aa		13.76	□□□□□ -0.21
CCDC142-209	ENST00000497232	C3orf67	Q6ZVT6	689 aa		13.76	□□□□□ -0.21
CCDC142-209	ENST00000497232	PPP1R42	Q7Z4L9	355 aa		13.76	□□□□□ -0.21
CCDC142-209	ENST00000497232	NUTM1	Q86Y26	1132 aa		13.76	□□□□□ -0.21
CCDC142-209	ENST00000497232	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.76	□□□□□ -0.21
CCDC142-209	ENST00000497232	KLRG2	A4D1S0	409 aa	Predicted RBP	13.75	□□□□□ -0.21
CCDC142-209	ENST00000497232	UBTFL1	P0CB47	393 aa	Predicted RBP	13.75	□□□□□ -0.21
CCDC142-209	ENST00000497232	PTGER2	P43116	358 aa		13.75	□□□□□ -0.21
CCDC142-209	ENST00000497232	ERICH6B	Q5W0A0	696 aa		13.75	□□□□□ -0.21
CCDC142-209	ENST00000497232	MTFR1L	Q9H019	292 aa		13.75	□□□□□ -0.21
CCDC142-209	ENST00000497232	C1orf115	Q9H7X2	142 aa		13.75	□□□□□ -0.21
CCDC142-209	ENST00000497232	TRMT112	Q9UI30	125 aa	Known RBP	13.75	□□□□□ -0.21
CCDC142-209	ENST00000497232	LRRFIP2	Q9Y608	721 aa	Known RBP	13.75	□□□□□ -0.21
CCDC142-209	ENST00000497232	COL4A1	P02462	1669 aa		13.75	□□□□□ -0.21
CCDC142-209	ENST00000497232	IRS4	O14654	1257 aa	Predicted RBP	13.74	□□□□□ -0.21
CCDC142-209	ENST00000497232	GNAI2	P04899	355 aa		13.74	□□□□□ -0.21
CCDC142-209	ENST00000497232	CEP85	Q6P2H3	762 aa		13.74	□□□□□ -0.21
CCDC142-209	ENST00000497232	TPTE2	Q6XPS3	522 aa		13.74	□□□□□ -0.21
CCDC142-209	ENST00000497232	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.74	□□□□□ -0.21
CCDC142-209	ENST00000497232	NYX	Q9GZU5	481 aa		13.74	□□□□□ -0.21
CCDC142-209	ENST00000497232	BICC1	Q9H694	974 aa	Known RBP	13.74	□□□□□ -0.21
CCDC142-209	ENST00000497232	KIF13B	Q9NQT8	1826 aa		13.74	□□□□□ -0.21
CCDC142-209	ENST00000497232	ZBTB7A	O95365	584 aa		13.73	□□□□□ -0.21
CCDC142-209	ENST00000497232	HCLS1	P14317	486 aa	Predicted RBP	13.73	□□□□□ -0.21
CCDC142-209	ENST00000497232	RFX5	P48382	616 aa	Predicted RBP	13.73	□□□□□ -0.21
CCDC142-209	ENST00000497232	POLA2	Q14181	598 aa		13.73	□□□□□ -0.21
CCDC142-209	ENST00000497232	CRY2	Q49AN0	593 aa		13.73	□□□□□ -0.21
CCDC142-209	ENST00000497232	RTL5	Q5HYW3	569 aa	Predicted RBP	13.73	□□□□□ -0.21
CCDC142-209	ENST00000497232	CHMP4B	Q9H444	224 aa	Known RBP	13.73	□□□□□ -0.21
CCDC142-209	ENST00000497232	C10orf71	Q711Q0	1435 aa		13.73	□□□□□ -0.21
CCDC142-209	ENST00000497232	MYH3	P11055	1940 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms