RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 CHMP3Q9Y3E7 222 aa7.21□□□□□ -1.26
VPS26A-208ENST00000497022 SHISA2Q6UWI4 295 aa7.2□□□□□ -1.26
VPS26A-208ENST00000497022 USP21Q9UK80 565 aa7.2□□□□□ -1.26
VPS26A-208ENST00000497022 RNF112Q9ULX5 631 aa7.2□□□□□ -1.26
VPS26A-208ENST00000497022 SH3PXD2AQ5TCZ1 1133 aa7.19□□□□□ -1.26
VPS26A-208ENST00000497022 ILDR2Q71H61 639 aa7.19□□□□□ -1.26
VPS26A-208ENST00000497022 PROSER2Q86WR7 435 aaPredicted RBP7.19□□□□□ -1.26
VPS26A-208ENST00000497022 TNS4Q8IZW8 715 aa7.19□□□□□ -1.26
VPS26A-208ENST00000497022 DTWD1Q8N5C7 304 aa7.19□□□□□ -1.26
VPS26A-208ENST00000497022 BHMTQ93088 406 aa7.19□□□□□ -1.26
VPS26A-208ENST00000497022 UBE2OQ9C0C9 1292 aaKnown RBP7.19□□□□□ -1.26
VPS26A-208ENST00000497022 A6NJR5 290 aa7.18□□□□□ -1.26
VPS26A-208ENST00000497022 SFI1A8K8P3 1242 aa7.18□□□□□ -1.26
VPS26A-208ENST00000497022 AFF1P51825 1210 aaKnown RBP7.18□□□□□ -1.26
VPS26A-208ENST00000497022 NCOA4Q13772 614 aa7.18□□□□□ -1.26
VPS26A-208ENST00000497022 HIF1AQ16665 826 aa7.18□□□□□ -1.26
VPS26A-208ENST00000497022 TBCELQ5QJ74 424 aa7.18□□□□□ -1.26
VPS26A-208ENST00000497022 MCTP1Q6DN14 999 aa7.18□□□□□ -1.26
VPS26A-208ENST00000497022 HSH2DQ96JZ2 352 aa7.18□□□□□ -1.26
VPS26A-208ENST00000497022 TRIM50Q86XT4 487 aa7.17□□□□□ -1.26
VPS26A-208ENST00000497022 SUSD3Q96L08 255 aa7.17□□□□□ -1.26
VPS26A-208ENST00000497022 PHACTR1Q9C0D0 580 aa7.17□□□□□ -1.26
VPS26A-208ENST00000497022 USP17L5A8MUK1 530 aa7.16□□□□□ -1.26
VPS26A-208ENST00000497022 TBC1D8BQ0IIM8 1120 aa7.16□□□□□ -1.26
VPS26A-208ENST00000497022 PSAPL1Q6NUJ1 521 aa7.16□□□□□ -1.26
VPS26A-208ENST00000497022 DEPDC4Q8N2C3 294 aa7.16□□□□□ -1.26
VPS26A-208ENST00000497022 NUDT8Q8WV74 236 aa7.16□□□□□ -1.26
VPS26A-208ENST00000497022 UCN2Q96RP3 112 aa7.16□□□□□ -1.26
VPS26A-208ENST00000497022 KRTAP4-8A0A0G2JLE6 195 aa7.15□□□□□ -1.26
VPS26A-208ENST00000497022 M0R2N6 131 aa7.15□□□□□ -1.26
VPS26A-208ENST00000497022 RGS9O75916 674 aaPredicted RBP7.15□□□□□ -1.26
VPS26A-208ENST00000497022 SLC51AQ86UW1 340 aa7.15□□□□□ -1.26
VPS26A-208ENST00000497022 ZNF280CQ8ND82 737 aa7.15□□□□□ -1.26
VPS26A-208ENST00000497022 ATP9BO43861 1147 aa7.14□□□□□ -1.27
VPS26A-208ENST00000497022 ATP1A2P50993 1020 aa7.14□□□□□ -1.27
VPS26A-208ENST00000497022 PCSK7Q16549 785 aa7.14□□□□□ -1.27
VPS26A-208ENST00000497022 BTLAQ7Z6A9 289 aa7.14□□□□□ -1.27
VPS26A-208ENST00000497022 PLEKHM2Q8IWE5 1019 aa7.14□□□□□ -1.27
VPS26A-208ENST00000497022 DMRTC2Q8IXT2 367 aaPredicted RBP7.14□□□□□ -1.27
VPS26A-208ENST00000497022 TPCN2Q8NHX9 752 aa7.14□□□□□ -1.27
VPS26A-208ENST00000497022 GLMNQ92990 594 aa7.14□□□□□ -1.27
VPS26A-208ENST00000497022 TSPAN10Q9H1Z9 355 aaPredicted RBP7.14□□□□□ -1.27
VPS26A-208ENST00000497022 DNAJB12Q9NXW2 375 aaKnown RBP7.14□□□□□ -1.27
VPS26A-208ENST00000497022 NAGPAQ9UK23 515 aa7.14□□□□□ -1.27
VPS26A-208ENST00000497022 HCN4Q9Y3Q4 1203 aa7.14□□□□□ -1.27
VPS26A-208ENST00000497022 MSL1Q68DK7 614 aa7.13□□□□□ -1.27
VPS26A-208ENST00000497022 FBXO11Q86XK2 927 aa7.13□□□□□ -1.27
VPS26A-208ENST00000497022 WFDC12Q8WWY7 111 aa7.13□□□□□ -1.27
VPS26A-208ENST00000497022 IGFLR1Q9H665 355 aa7.13□□□□□ -1.27
VPS26A-208ENST00000497022 COL17A1Q9UMD9 1497 aaPredicted RBP7.12□□□□□ -1.27
VPS26A-208ENST00000497022 USP17L3A6NCW0 530 aa7.12□□□□□ -1.27
VPS26A-208ENST00000497022 USP17L4A6NCW7 530 aa7.12□□□□□ -1.27
VPS26A-208ENST00000497022 PAX4O43316 350 aa7.12□□□□□ -1.27
VPS26A-208ENST00000497022 IER5Q5VY09 327 aa7.12□□□□□ -1.27
VPS26A-208ENST00000497022 USP17L2Q6R6M4 530 aa7.12□□□□□ -1.27
VPS26A-208ENST00000497022 USP17L1Q7RTZ2 530 aa7.12□□□□□ -1.27
VPS26A-208ENST00000497022 STAG2Q8N3U4 1231 aa7.12□□□□□ -1.27
VPS26A-208ENST00000497022 PNMA5Q96PV4 448 aa7.12□□□□□ -1.27
VPS26A-208ENST00000497022 GSX2Q9BZM3 304 aa7.12□□□□□ -1.27
VPS26A-208ENST00000497022 FRRS1LQ9P0K9 344 aa7.12□□□□□ -1.27
VPS26A-208ENST00000497022 ZBTB7BO15156 539 aaPredicted RBP7.11□□□□□ -1.27
VPS26A-208ENST00000497022 CCDC102BQ68D86 513 aa7.11□□□□□ -1.27
VPS26A-208ENST00000497022 IGF2-ASQ6U949 168 aa7.11□□□□□ -1.27
VPS26A-208ENST00000497022 PRR23CQ6ZRP0 262 aa7.11□□□□□ -1.27
VPS26A-208ENST00000497022 CALR3Q96L12 384 aaKnown RBP7.11□□□□□ -1.27
VPS26A-208ENST00000497022 TFIP11Q9UBB9 837 aaKnown RBP7.11□□□□□ -1.27
VPS26A-208ENST00000497022 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.11□□□□□ -1.27
VPS26A-208ENST00000497022 NOS3P29474 1203 aa7.1□□□□□ -1.27
VPS26A-208ENST00000497022 TXKP42681 527 aa7.1□□□□□ -1.27
VPS26A-208ENST00000497022 IREB2P48200 963 aaKnown RBP7.1□□□□□ -1.27
VPS26A-208ENST00000497022 CCINQ13939 588 aa7.1□□□□□ -1.27
VPS26A-208ENST00000497022 ALDH16A1Q8IZ83 802 aa7.1□□□□□ -1.27
VPS26A-208ENST00000497022 PCMTD2Q9NV79 361 aa7.1□□□□□ -1.27
VPS26A-208ENST00000497022 MKRN1Q9UHC7 482 aaKnown RBP7.1□□□□□ -1.27
VPS26A-208ENST00000497022 KIAA1024Q9UPX6 916 aa7.1□□□□□ -1.27
VPS26A-208ENST00000497022 PPP1R12BO60237 982 aaPredicted RBP7.09□□□□□ -1.27
VPS26A-208ENST00000497022 NFKB1P19838 968 aa7.09□□□□□ -1.27
VPS26A-208ENST00000497022 FAM35AQ86V20 835 aa7.09□□□□□ -1.27
VPS26A-208ENST00000497022 GAS2L2Q8NHY3 880 aa7.09□□□□□ -1.27
VPS26A-208ENST00000497022 TTC9Q92623 222 aa7.09□□□□□ -1.27
VPS26A-208ENST00000497022 PALM3A6NDB9 673 aaPredicted RBP7.08□□□□□ -1.28
VPS26A-208ENST00000497022 MAP3K6O95382 1288 aa7.08□□□□□ -1.28
VPS26A-208ENST00000497022 CLDN10P78369 228 aa7.08□□□□□ -1.28
VPS26A-208ENST00000497022 GRIK5Q16478 980 aa7.08□□□□□ -1.28
VPS26A-208ENST00000497022 WFDC8Q8IUA0 241 aa7.08□□□□□ -1.28
VPS26A-208ENST00000497022 LARGE2Q8N3Y3 721 aa7.08□□□□□ -1.28
VPS26A-208ENST00000497022 OGFOD1Q8N543 542 aa7.08□□□□□ -1.28
VPS26A-208ENST00000497022 MEGF10Q96KG7 1140 aa7.08□□□□□ -1.28
VPS26A-208ENST00000497022 FMNL2Q96PY5 1086 aa7.08□□□□□ -1.28
VPS26A-208ENST00000497022 LPIN3Q9BQK8 851 aa7.08□□□□□ -1.28
VPS26A-208ENST00000497022 MAFBQ9Y5Q3 323 aaPredicted RBP7.08□□□□□ -1.28
VPS26A-208ENST00000497022 TGFBR3LH3BV60 316 aa7.07□□□□□ -1.28
VPS26A-208ENST00000497022 EPB42P16452 691 aa7.07□□□□□ -1.28
VPS26A-208ENST00000497022 SIX5Q8N196 739 aa7.07□□□□□ -1.28
VPS26A-208ENST00000497022 C2orf49Q9BVC5 232 aaPredicted RBP7.07□□□□□ -1.28
VPS26A-208ENST00000497022 PPP1R12CQ9BZL4 782 aa7.07□□□□□ -1.28
VPS26A-208ENST00000497022 ZNF777Q9ULD5 760 aaPredicted RBP7.07□□□□□ -1.28
VPS26A-208ENST00000497022 C21orf2O43822 256 aa7.06□□□□□ -1.28
VPS26A-208ENST00000497022 FSTP19883 344 aa7.06□□□□□ -1.28
VPS26A-208ENST00000497022 DZIP1LQ8IYY4 767 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms