RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 CHMP4BQ9H444 224 aaKnown RBP23.01■■□□□ 1.27
RGP1-202ENST00000496906 ZBTB40Q9NUA8 1239 aa23.01■■□□□ 1.27
RGP1-202ENST00000496906 UTYO14607 1347 aa23.01■■□□□ 1.27
RGP1-202ENST00000496906 C9orf78Q9NZ63 289 aaPredicted RBP23.01■■□□□ 1.27
RGP1-202ENST00000496906 NBPF7P0C2Y1 421 aaPredicted RBP23■■□□□ 1.27
RGP1-202ENST00000496906 GNAI3P08754 354 aa22.99■■□□□ 1.27
RGP1-202ENST00000496906 BICDL1Q6ZP65 573 aa22.99■■□□□ 1.27
RGP1-202ENST00000496906 COL24A1Q17RW2 1714 aa22.99■■□□□ 1.27
RGP1-202ENST00000496906 AAMPQ13685 434 aa22.98■■□□□ 1.27
RGP1-202ENST00000496906 NFIXQ14938 502 aa22.98■■□□□ 1.27
RGP1-202ENST00000496906 SUSD4Q5VX71 490 aa22.98■■□□□ 1.27
RGP1-202ENST00000496906 SETDB2Q96T68 719 aa22.98■■□□□ 1.27
RGP1-202ENST00000496906 PDGFDQ9GZP0 370 aaPredicted RBP22.98■■□□□ 1.27
RGP1-202ENST00000496906 H7C1W4 665 aa22.97■■□□□ 1.27
RGP1-202ENST00000496906 UBTFL1P0CB47 393 aaPredicted RBP22.97■■□□□ 1.27
RGP1-202ENST00000496906 CASP7P55210 303 aa22.97■■□□□ 1.27
RGP1-202ENST00000496906 ERICH6BQ5W0A0 696 aa22.97■■□□□ 1.27
RGP1-202ENST00000496906 NLGN1Q8N2Q7 840 aa22.97■■□□□ 1.27
RGP1-202ENST00000496906 PCCAP05165 728 aaPredicted RBP22.97■■□□□ 1.27
RGP1-202ENST00000496906 TM4SF1P30408 202 aa22.97■■□□□ 1.27
RGP1-202ENST00000496906 UBE3BQ7Z3V4 1068 aa22.97■■□□□ 1.27
RGP1-202ENST00000496906 ZBTB38Q8NAP3 1195 aaPredicted RBP22.97■■□□□ 1.27
RGP1-202ENST00000496906 CARMIL3Q8ND23 1372 aa22.96■■□□□ 1.27
RGP1-202ENST00000496906 NTSR2O95665 410 aa22.96■■□□□ 1.27
RGP1-202ENST00000496906 PPP1R42Q7Z4L9 355 aa22.96■■□□□ 1.27
RGP1-202ENST00000496906 UTP14AQ9BVJ6 771 aaKnown RBP22.96■■□□□ 1.27
RGP1-202ENST00000496906 TRMT112Q9UI30 125 aaKnown RBP22.96■■□□□ 1.27
RGP1-202ENST00000496906 R3HDM1Q15032 1099 aaKnown RBP22.95■■□□□ 1.26
RGP1-202ENST00000496906 JARID2Q92833 1246 aaPredicted RBP22.95■■□□□ 1.26
RGP1-202ENST00000496906 C1orf115Q9H7X2 142 aa22.95■■□□□ 1.26
RGP1-202ENST00000496906 FAM177BA6PVY3 158 aa22.94■■□□□ 1.26
RGP1-202ENST00000496906 GNAI2P04899 355 aa22.94■■□□□ 1.26
RGP1-202ENST00000496906 RTL5Q5HYW3 569 aaPredicted RBP22.94■■□□□ 1.26
RGP1-202ENST00000496906 FAM89AQ96GI7 184 aa22.94■■□□□ 1.26
RGP1-202ENST00000496906 CASZ1Q86V15 1759 aa22.93■■□□□ 1.26
RGP1-202ENST00000496906 MSL1Q68DK7 614 aa22.93■■□□□ 1.26
RGP1-202ENST00000496906 SLC16A10Q8TF71 515 aa22.93■■□□□ 1.26
RGP1-202ENST00000496906 LRRFIP2Q9Y608 721 aaKnown RBP22.93■■□□□ 1.26
RGP1-202ENST00000496906 CDHR2Q9BYE9 1310 aa22.93■■□□□ 1.26
RGP1-202ENST00000496906 DDR1Q08345 913 aa22.93■■□□□ 1.26
RGP1-202ENST00000496906 SUCLG2Q96I99 432 aa22.93■■□□□ 1.26
RGP1-202ENST00000496906 NYXQ9GZU5 481 aa22.93■■□□□ 1.26
RGP1-202ENST00000496906 SH3TC1Q8TE82 1336 aa22.93■■□□□ 1.26
RGP1-202ENST00000496906 POLRMTO00411 1230 aaKnown RBP22.92■■□□□ 1.26
RGP1-202ENST00000496906 NBPF5PQ86XG9 351 aaPredicted RBP22.92■■□□□ 1.26
RGP1-202ENST00000496906 SYNE4Q8N205 404 aa22.92■■□□□ 1.26
RGP1-202ENST00000496906 KAZALD1Q96I82 304 aa22.92■■□□□ 1.26
RGP1-202ENST00000496906 HDAC5Q9UQL6 1122 aa22.92■■□□□ 1.26
RGP1-202ENST00000496906 PSDA5PKW4 1024 aaPredicted RBP22.91■■□□□ 1.26
RGP1-202ENST00000496906 GTF3C3Q9Y5Q9 886 aa22.91■■□□□ 1.26
RGP1-202ENST00000496906 NUTM1Q86Y26 1132 aa22.9■■□□□ 1.26
RGP1-202ENST00000496906 PCDHB15Q9Y5E8 787 aa22.9■■□□□ 1.26
RGP1-202ENST00000496906 IRS4O14654 1257 aaPredicted RBP22.89■■□□□ 1.26
RGP1-202ENST00000496906 SERPINB2P05120 415 aa22.89■■□□□ 1.26
RGP1-202ENST00000496906 MMP10P09238 476 aa22.89■■□□□ 1.26
RGP1-202ENST00000496906 TPTE2Q6XPS3 522 aa22.89■■□□□ 1.26
RGP1-202ENST00000496906 PLA2G12BQ9BX93 195 aa22.89■■□□□ 1.26
RGP1-202ENST00000496906 EPHA10Q5JZY3 1008 aa22.89■■□□□ 1.25
RGP1-202ENST00000496906 BICC1Q9H694 974 aaKnown RBP22.89■■□□□ 1.25
RGP1-202ENST00000496906 ABCC12Q96J65 1359 aa22.88■■□□□ 1.25
RGP1-202ENST00000496906 ERFEQ4G0M1 354 aa22.88■■□□□ 1.25
RGP1-202ENST00000496906 CEP85Q6P2H3 762 aa22.88■■□□□ 1.25
RGP1-202ENST00000496906 CNBD1Q8NA66 436 aa22.88■■□□□ 1.25
RGP1-202ENST00000496906 PRR5LQ6MZQ0 368 aa22.87■■□□□ 1.25
RGP1-202ENST00000496906 ANKRD44Q8N8A2 993 aa22.87■■□□□ 1.25
RGP1-202ENST00000496906 NRXN2Q9P2S2 1712 aa22.86■■□□□ 1.25
RGP1-202ENST00000496906 GTF2E1P29083 439 aaPredicted RBP22.86■■□□□ 1.25
RGP1-202ENST00000496906 FOXO4P98177 505 aa22.86■■□□□ 1.25
RGP1-202ENST00000496906 RABL6Q3YEC7 729 aaPredicted RBP22.86■■□□□ 1.25
RGP1-202ENST00000496906 PARP3Q9Y6F1 533 aa22.86■■□□□ 1.25
RGP1-202ENST00000496906 LAMB2P55268 1798 aa22.86■■□□□ 1.25
RGP1-202ENST00000496906 PDE8AO60658 829 aa22.85■■□□□ 1.25
RGP1-202ENST00000496906 HCLS1P14317 486 aaPredicted RBP22.85■■□□□ 1.25
RGP1-202ENST00000496906 SLC10A5Q5PT55 438 aa22.85■■□□□ 1.25
RGP1-202ENST00000496906 RPAP2Q8IXW5 612 aaPredicted RBP22.85■■□□□ 1.25
RGP1-202ENST00000496906 MTFR1LQ9H019 292 aa22.85■■□□□ 1.25
RGP1-202ENST00000496906 DDX60Q8IY21 1712 aaKnown RBP22.85■■□□□ 1.25
RGP1-202ENST00000496906 ZBTB7AO95365 584 aa22.84■■□□□ 1.25
RGP1-202ENST00000496906 HSP90B1P14625 803 aaKnown RBP22.84■■□□□ 1.25
RGP1-202ENST00000496906 MTX1Q13505 466 aa22.84■■□□□ 1.25
RGP1-202ENST00000496906 SIRT2Q8IXJ6 389 aa22.84■■□□□ 1.25
RGP1-202ENST00000496906 PPP4R2Q9NY27 417 aa22.84■■□□□ 1.25
RGP1-202ENST00000496906 NPHP1O15259 732 aa22.84■■□□□ 1.25
RGP1-202ENST00000496906 RIC1Q4ADV7 1423 aa22.83■■□□□ 1.25
RGP1-202ENST00000496906 CTSWP56202 376 aa22.83■■□□□ 1.25
RGP1-202ENST00000496906 ATP8B2P98198 1209 aa22.83■■□□□ 1.25
RGP1-202ENST00000496906 CCDC24Q8N4L8 307 aa22.83■■□□□ 1.25
RGP1-202ENST00000496906 PNMA6EA0A0J9YXQ4 647 aa22.82■■□□□ 1.24
RGP1-202ENST00000496906 CSF1RP07333 972 aa22.82■■□□□ 1.24
RGP1-202ENST00000496906 ST5P78524 1137 aa22.82■■□□□ 1.24
RGP1-202ENST00000496906 LMBR1LQ6UX01 489 aa22.82■■□□□ 1.24
RGP1-202ENST00000496906 TTLL11Q8NHH1 800 aa22.8■■□□□ 1.24
RGP1-202ENST00000496906 MYH3P11055 1940 aa22.8■■□□□ 1.24
RGP1-202ENST00000496906 SRGAP3O43295 1099 aa22.8■■□□□ 1.24
RGP1-202ENST00000496906 HDAC1Q13547 482 aaPredicted RBP22.8■■□□□ 1.24
RGP1-202ENST00000496906 C3orf67Q6ZVT6 689 aa22.8■■□□□ 1.24
RGP1-202ENST00000496906 SSH3Q8TE77 659 aa22.8■■□□□ 1.24
RGP1-202ENST00000496906 ATF5Q9Y2D1 282 aaPredicted RBP22.8■■□□□ 1.24
RGP1-202ENST00000496906 TNRC6CQ9HCJ0 1690 aaKnown RBP22.79■■□□□ 1.24
RGP1-202ENST00000496906 POLA2Q14181 598 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms