RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 AVENQ9NQS1 362 aaPredicted RBP9.33□□□□□ -0.92
SNX13-211ENST00000496855 STK17AQ9UEE5 414 aa9.33□□□□□ -0.92
SNX13-211ENST00000496855 BCRP11274 1271 aa9.32□□□□□ -0.92
SNX13-211ENST00000496855 EPB42P16452 691 aa9.32□□□□□ -0.92
SNX13-211ENST00000496855 ARSDP51689 593 aa9.32□□□□□ -0.92
SNX13-211ENST00000496855 SPEM2Q0P670 501 aa9.32□□□□□ -0.92
SNX13-211ENST00000496855 ZNF468Q5VIY5 522 aaPredicted RBP9.32□□□□□ -0.92
SNX13-211ENST00000496855 SLC30A3Q99726 388 aa9.32□□□□□ -0.92
SNX13-211ENST00000496855 LRRC4BQ9NT99 713 aa9.32□□□□□ -0.92
SNX13-211ENST00000496855 STIM2Q9P246 746 aa9.32□□□□□ -0.92
SNX13-211ENST00000496855 GGA1Q9UJY5 639 aa9.32□□□□□ -0.92
SNX13-211ENST00000496855 FAM181BA6NEQ2 426 aa9.31□□□□□ -0.92
SNX13-211ENST00000496855 OPLAHO14841 1288 aa9.31□□□□□ -0.92
SNX13-211ENST00000496855 ARHGEF15O94989 841 aa9.31□□□□□ -0.92
SNX13-211ENST00000496855 GRNP28799 593 aaKnown RBP9.31□□□□□ -0.92
SNX13-211ENST00000496855 MAP3K10Q02779 954 aa9.31□□□□□ -0.92
SNX13-211ENST00000496855 FAM26DQ5JW98 314 aa9.31□□□□□ -0.92
SNX13-211ENST00000496855 HELQQ8TDG4 1101 aa9.31□□□□□ -0.92
SNX13-211ENST00000496855 KLF15Q9UIH9 416 aa9.31□□□□□ -0.92
SNX13-211ENST00000496855 MTMR7Q9Y216 660 aa9.31□□□□□ -0.92
SNX13-211ENST00000496855 OIP5O43482 229 aa9.3□□□□□ -0.92
SNX13-211ENST00000496855 ADH6P28332 368 aa9.3□□□□□ -0.92
SNX13-211ENST00000496855 PCBP4P57723 403 aaKnown RBP9.3□□□□□ -0.92
SNX13-211ENST00000496855 SLCO4C1Q6ZQN7 724 aa9.3□□□□□ -0.92
SNX13-211ENST00000496855 GTF3C2Q8WUA4 911 aaPredicted RBP9.3□□□□□ -0.92
SNX13-211ENST00000496855 NEURL1BA8MQ27 555 aa9.29□□□□□ -0.92
SNX13-211ENST00000496855 C1orf229Q6ZS94 237 aaPredicted RBP9.29□□□□□ -0.92
SNX13-211ENST00000496855 SYT9Q86SS6 491 aa9.29□□□□□ -0.92
SNX13-211ENST00000496855 DNMT3AQ9Y6K1 912 aaPredicted RBP9.29□□□□□ -0.92
SNX13-211ENST00000496855 NEUROD1Q13562 356 aa9.28□□□□□ -0.92
SNX13-211ENST00000496855 ABTB2Q8N961 1025 aa9.28□□□□□ -0.92
SNX13-211ENST00000496855 ENAMQ9NRM1 1142 aa9.28□□□□□ -0.92
SNX13-211ENST00000496855 RTCBQ9Y3I0 505 aaKnown RBP9.28□□□□□ -0.92
SNX13-211ENST00000496855 RAB44Q7Z6P3 723 aaPredicted RBP9.28□□□□□ -0.92
SNX13-211ENST00000496855 GALNT6Q8NCL4 622 aa9.28□□□□□ -0.92
SNX13-211ENST00000496855 EDARADDQ8WWZ3 215 aa9.28□□□□□ -0.92
SNX13-211ENST00000496855 GSX2Q9BZM3 304 aa9.28□□□□□ -0.92
SNX13-211ENST00000496855 C11orf16Q9NQ32 467 aa9.28□□□□□ -0.92
SNX13-211ENST00000496855 ZBTB39O15060 712 aa9.27□□□□□ -0.93
SNX13-211ENST00000496855 SIN3BO75182 1162 aa9.27□□□□□ -0.93
SNX13-211ENST00000496855 ARID4AP29374 1257 aaPredicted RBP9.27□□□□□ -0.93
SNX13-211ENST00000496855 CCINQ13939 588 aa9.27□□□□□ -0.93
SNX13-211ENST00000496855 FCHSD1Q86WN1 690 aa9.27□□□□□ -0.93
SNX13-211ENST00000496855 RGL4Q8IZJ4 473 aa9.27□□□□□ -0.93
SNX13-211ENST00000496855 EFCC1Q9HA90 598 aa9.27□□□□□ -0.93
SNX13-211ENST00000496855 USP20Q9Y2K6 914 aa9.27□□□□□ -0.93
SNX13-211ENST00000496855 EPXP11678 715 aa9.26□□□□□ -0.93
SNX13-211ENST00000496855 ZAP70P43403 619 aa9.26□□□□□ -0.93
SNX13-211ENST00000496855 BHMTQ93088 406 aa9.26□□□□□ -0.93
SNX13-211ENST00000496855 ADAMTS8Q9UP79 889 aa9.26□□□□□ -0.93
SNX13-211ENST00000496855 SHISA8B8ZZ34 492 aa9.25□□□□□ -0.93
SNX13-211ENST00000496855 MTMR3Q13615 1198 aa9.25□□□□□ -0.93
SNX13-211ENST00000496855 FAM13BQ9NYF5 915 aa9.25□□□□□ -0.93
SNX13-211ENST00000496855 CMTR1Q8N1G2 835 aaKnown RBP9.24□□□□□ -0.93
SNX13-211ENST00000496855 NEDD1Q8NHV4 660 aa9.24□□□□□ -0.93
SNX13-211ENST00000496855 PNMA5Q96PV4 448 aa9.24□□□□□ -0.93
SNX13-211ENST00000496855 ABL1P00519 1130 aa9.23□□□□□ -0.93
SNX13-211ENST00000496855 SF3B2Q13435 895 aaKnown RBP9.23□□□□□ -0.93
SNX13-211ENST00000496855 PIK3R5Q8WYR1 880 aa9.23□□□□□ -0.93
SNX13-211ENST00000496855 TNFRSF25Q93038 417 aa9.23□□□□□ -0.93
SNX13-211ENST00000496855 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.23□□□□□ -0.93
SNX13-211ENST00000496855 KCNMB2Q9Y691 235 aa9.23□□□□□ -0.93
SNX13-211ENST00000496855 ADARB2-AS1A8MUL3 147 aa9.22□□□□□ -0.93
SNX13-211ENST00000496855 XYLBO75191 536 aa9.22□□□□□ -0.93
SNX13-211ENST00000496855 EGFRP00533 1210 aa9.22□□□□□ -0.93
SNX13-211ENST00000496855 NFKB1P19838 968 aa9.22□□□□□ -0.93
SNX13-211ENST00000496855 MPSTP25325 297 aa9.22□□□□□ -0.93
SNX13-211ENST00000496855 NOM1Q5C9Z4 860 aaKnown RBP9.22□□□□□ -0.93
SNX13-211ENST00000496855 TXNDC2Q86VQ3 553 aa9.22□□□□□ -0.93
SNX13-211ENST00000496855 GPR152Q8TDT2 470 aa9.22□□□□□ -0.93
SNX13-211ENST00000496855 MDFIQ99750 246 aa9.22□□□□□ -0.93
SNX13-211ENST00000496855 ELOA3CA0A087WX78 387 aaPredicted RBP9.21□□□□□ -0.93
SNX13-211ENST00000496855 ELOA3DA6NLF2 546 aaPredicted RBP9.21□□□□□ -0.93
SNX13-211ENST00000496855 BRD1O95696 1058 aa9.21□□□□□ -0.93
SNX13-211ENST00000496855 NPR3P17342 541 aa9.21□□□□□ -0.93
SNX13-211ENST00000496855 SERPINB4P48594 390 aa9.21□□□□□ -0.93
SNX13-211ENST00000496855 FKBP4Q02790 459 aaKnown RBP eCLIP9.21□□□□□ -0.93
SNX13-211ENST00000496855 ZNF211Q13398 564 aaPredicted RBP9.21□□□□□ -0.93
SNX13-211ENST00000496855 ELOA3BQ3SY89 546 aa9.21□□□□□ -0.93
SNX13-211ENST00000496855 ATCAYQ86WG3 371 aa9.21□□□□□ -0.93
SNX13-211ENST00000496855 ELOA3Q8NG57 546 aa9.21□□□□□ -0.93
SNX13-211ENST00000496855 ANO2Q9NQ90 1003 aa9.21□□□□□ -0.93
SNX13-211ENST00000496855 EGFL7Q9UHF1 273 aa9.21□□□□□ -0.93
SNX13-211ENST00000496855 SASH3O75995 380 aa9.21□□□□□ -0.94
SNX13-211ENST00000496855 TARSP26639 723 aaKnown RBP9.21□□□□□ -0.94
SNX13-211ENST00000496855 EIF1AXP47813 144 aaKnown RBP9.21□□□□□ -0.94
SNX13-211ENST00000496855 KRT25Q7Z3Z0 450 aa9.21□□□□□ -0.94
SNX13-211ENST00000496855 BTBD6Q96KE9 485 aa9.21□□□□□ -0.94
SNX13-211ENST00000496855 FAM13AO94988 1023 aa9.2□□□□□ -0.94
SNX13-211ENST00000496855 MAP3K6O95382 1288 aa9.2□□□□□ -0.94
SNX13-211ENST00000496855 AMPD1P23109 780 aa9.2□□□□□ -0.94
SNX13-211ENST00000496855 MARSP56192 900 aaKnown RBP9.2□□□□□ -0.94
SNX13-211ENST00000496855 TRIP4Q15650 581 aaPredicted RBP9.2□□□□□ -0.94
SNX13-211ENST00000496855 ALKBH2Q6NS38 261 aa9.2□□□□□ -0.94
SNX13-211ENST00000496855 ZFATQ9P243 1243 aa9.2□□□□□ -0.94
SNX13-211ENST00000496855 ICMTO60725 284 aa9.19□□□□□ -0.94
SNX13-211ENST00000496855 RARAP10276 462 aa9.19□□□□□ -0.94
SNX13-211ENST00000496855 ALAS2P22557 587 aa9.19□□□□□ -0.94
SNX13-211ENST00000496855 CCER1Q8TC90 406 aaPredicted RBP9.19□□□□□ -0.94
SNX13-211ENST00000496855 UBE2OQ9C0C9 1292 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms