RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 ZBTB7BO15156 539 aaPredicted RBP17.61■□□□□ 0.41
ATPAF2-208ENST00000496852 USP44Q9H0E7 712 aa17.61■□□□□ 0.41
ATPAF2-208ENST00000496852 CWC25Q9NXE8 425 aaPredicted RBP17.61■□□□□ 0.41
ATPAF2-208ENST00000496852 PARP10Q53GL7 1025 aa17.61■□□□□ 0.41
ATPAF2-208ENST00000496852 UTYO14607 1347 aa17.6■□□□□ 0.41
ATPAF2-208ENST00000496852 TM4SF1P30408 202 aa17.6■□□□□ 0.41
ATPAF2-208ENST00000496852 NFIXQ14938 502 aa17.6■□□□□ 0.41
ATPAF2-208ENST00000496852 R3HDM1Q15032 1099 aaKnown RBP17.6■□□□□ 0.41
ATPAF2-208ENST00000496852 NLGN1Q8N2Q7 840 aa17.6■□□□□ 0.41
ATPAF2-208ENST00000496852 EXOC6Q8TAG9 804 aa17.6■□□□□ 0.41
ATPAF2-208ENST00000496852 MEIS3Q99687 375 aa17.6■□□□□ 0.41
ATPAF2-208ENST00000496852 GRM8O00222 908 aa17.59■□□□□ 0.41
ATPAF2-208ENST00000496852 SUSD4Q5VX71 490 aa17.59■□□□□ 0.41
ATPAF2-208ENST00000496852 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
ATPAF2-208ENST00000496852 SLC16A10Q8TF71 515 aa17.58■□□□□ 0.41
ATPAF2-208ENST00000496852 SETDB2Q96T68 719 aa17.58■□□□□ 0.41
ATPAF2-208ENST00000496852 ANKRD31Q8N7Z5 1873 aa17.58■□□□□ 0.41
ATPAF2-208ENST00000496852 CARMIL3Q8ND23 1372 aa17.58■□□□□ 0.41
ATPAF2-208ENST00000496852 H7C1W4 665 aa17.58■□□□□ 0.4
ATPAF2-208ENST00000496852 NBPF7P0C2Y1 421 aaPredicted RBP17.58■□□□□ 0.4
ATPAF2-208ENST00000496852 CASP7P55210 303 aa17.58■□□□□ 0.4
ATPAF2-208ENST00000496852 ZBTB40Q9NUA8 1239 aa17.58■□□□□ 0.4
ATPAF2-208ENST00000496852 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.4
ATPAF2-208ENST00000496852 SOCS7O14512 581 aa17.57■□□□□ 0.4
ATPAF2-208ENST00000496852 NTSR2O95665 410 aa17.57■□□□□ 0.4
ATPAF2-208ENST00000496852 PCCAP05165 728 aaPredicted RBP17.57■□□□□ 0.4
ATPAF2-208ENST00000496852 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
ATPAF2-208ENST00000496852 CHMP4BQ9H444 224 aaKnown RBP17.57■□□□□ 0.4
ATPAF2-208ENST00000496852 GNAI3P08754 354 aa17.56■□□□□ 0.4
ATPAF2-208ENST00000496852 ZBTB38Q8NAP3 1195 aaPredicted RBP17.56■□□□□ 0.4
ATPAF2-208ENST00000496852 UTP14AQ9BVJ6 771 aaKnown RBP17.56■□□□□ 0.4
ATPAF2-208ENST00000496852 TNRC6CQ9HCJ0 1690 aaKnown RBP17.56■□□□□ 0.4
ATPAF2-208ENST00000496852 PSDA5PKW4 1024 aaPredicted RBP17.55■□□□□ 0.4
ATPAF2-208ENST00000496852 UBTFL1P0CB47 393 aaPredicted RBP17.55■□□□□ 0.4
ATPAF2-208ENST00000496852 DDR1Q08345 913 aa17.55■□□□□ 0.4
ATPAF2-208ENST00000496852 MSL1Q68DK7 614 aa17.55■□□□□ 0.4
ATPAF2-208ENST00000496852 UBE3BQ7Z3V4 1068 aa17.55■□□□□ 0.4
ATPAF2-208ENST00000496852 TRMT112Q9UI30 125 aaKnown RBP17.55■□□□□ 0.4
ATPAF2-208ENST00000496852 CDHR2Q9BYE9 1310 aa17.55■□□□□ 0.4
ATPAF2-208ENST00000496852 FAM177BA6PVY3 158 aa17.55■□□□□ 0.4
ATPAF2-208ENST00000496852 POLRMTO00411 1230 aaKnown RBP17.55■□□□□ 0.4
ATPAF2-208ENST00000496852 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
ATPAF2-208ENST00000496852 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
ATPAF2-208ENST00000496852 KIF13BQ9NQT8 1826 aa17.54■□□□□ 0.4
ATPAF2-208ENST00000496852 AAMPQ13685 434 aa17.54■□□□□ 0.4
ATPAF2-208ENST00000496852 RTL5Q5HYW3 569 aaPredicted RBP17.54■□□□□ 0.4
ATPAF2-208ENST00000496852 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
ATPAF2-208ENST00000496852 SH3TC1Q8TE82 1336 aa17.54■□□□□ 0.4
ATPAF2-208ENST00000496852 SERPINB2P05120 415 aa17.53■□□□□ 0.4
ATPAF2-208ENST00000496852 MMP10P09238 476 aa17.53■□□□□ 0.4
ATPAF2-208ENST00000496852 NBPF5PQ86XG9 351 aaPredicted RBP17.53■□□□□ 0.4
ATPAF2-208ENST00000496852 SYNE4Q8N205 404 aa17.53■□□□□ 0.4
ATPAF2-208ENST00000496852 KAZALD1Q96I82 304 aa17.53■□□□□ 0.4
ATPAF2-208ENST00000496852 GNAI2P04899 355 aa17.52■□□□□ 0.4
ATPAF2-208ENST00000496852 TPTE2Q6XPS3 522 aa17.52■□□□□ 0.4
ATPAF2-208ENST00000496852 NUTM1Q86Y26 1132 aa17.52■□□□□ 0.4
ATPAF2-208ENST00000496852 SUCLG2Q96I99 432 aa17.52■□□□□ 0.4
ATPAF2-208ENST00000496852 TAF1P21675 1872 aa17.52■□□□□ 0.4
ATPAF2-208ENST00000496852 RIC1Q4ADV7 1423 aa17.52■□□□□ 0.39
ATPAF2-208ENST00000496852 MTFR1LQ9H019 292 aa17.52■□□□□ 0.39
ATPAF2-208ENST00000496852 C1orf115Q9H7X2 142 aa17.52■□□□□ 0.39
ATPAF2-208ENST00000496852 LRRFIP2Q9Y608 721 aaKnown RBP17.52■□□□□ 0.39
ATPAF2-208ENST00000496852 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
ATPAF2-208ENST00000496852 ABCC12Q96J65 1359 aa17.51■□□□□ 0.39
ATPAF2-208ENST00000496852 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
ATPAF2-208ENST00000496852 ERICH6BQ5W0A0 696 aa17.51■□□□□ 0.39
ATPAF2-208ENST00000496852 PRR5LQ6MZQ0 368 aa17.51■□□□□ 0.39
ATPAF2-208ENST00000496852 PLA2G12BQ9BX93 195 aa17.51■□□□□ 0.39
ATPAF2-208ENST00000496852 HDAC5Q9UQL6 1122 aa17.51■□□□□ 0.39
ATPAF2-208ENST00000496852 PARP3Q9Y6F1 533 aa17.51■□□□□ 0.39
ATPAF2-208ENST00000496852 IRS4O14654 1257 aaPredicted RBP17.5■□□□□ 0.39
ATPAF2-208ENST00000496852 ZBTB7AO95365 584 aa17.5■□□□□ 0.39
ATPAF2-208ENST00000496852 CNBD1Q8NA66 436 aa17.5■□□□□ 0.39
ATPAF2-208ENST00000496852 COL11A2P13942 1736 aaPredicted RBP17.5■□□□□ 0.39
ATPAF2-208ENST00000496852 FOXO4P98177 505 aa17.49■□□□□ 0.39
ATPAF2-208ENST00000496852 EPHA10Q5JZY3 1008 aa17.49■□□□□ 0.39
ATPAF2-208ENST00000496852 SLC10A5Q5PT55 438 aa17.49■□□□□ 0.39
ATPAF2-208ENST00000496852 CACNA1SQ13698 1873 aa17.49■□□□□ 0.39
ATPAF2-208ENST00000496852 DLEC1Q9Y238 1755 aa17.49■□□□□ 0.39
ATPAF2-208ENST00000496852 GTF2E1P29083 439 aaPredicted RBP17.48■□□□□ 0.39
ATPAF2-208ENST00000496852 BICC1Q9H694 974 aaKnown RBP17.48■□□□□ 0.39
ATPAF2-208ENST00000496852 PCDHB15Q9Y5E8 787 aa17.48■□□□□ 0.39
ATPAF2-208ENST00000496852 PDE8AO60658 829 aa17.48■□□□□ 0.39
ATPAF2-208ENST00000496852 RABL6Q3YEC7 729 aaPredicted RBP17.48■□□□□ 0.39
ATPAF2-208ENST00000496852 ANKRD44Q8N8A2 993 aa17.48■□□□□ 0.39
ATPAF2-208ENST00000496852 HCLS1P14317 486 aaPredicted RBP17.47■□□□□ 0.39
ATPAF2-208ENST00000496852 MTX1Q13505 466 aa17.47■□□□□ 0.39
ATPAF2-208ENST00000496852 CEP85Q6P2H3 762 aa17.47■□□□□ 0.39
ATPAF2-208ENST00000496852 CCDC24Q8N4L8 307 aa17.47■□□□□ 0.39
ATPAF2-208ENST00000496852 SGIP1Q9BQI5 828 aa17.47■□□□□ 0.39
ATPAF2-208ENST00000496852 KIAA1551Q9HCM1 1747 aa17.47■□□□□ 0.39
ATPAF2-208ENST00000496852 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
ATPAF2-208ENST00000496852 NPHP1O15259 732 aa17.46■□□□□ 0.39
ATPAF2-208ENST00000496852 HSP90B1P14625 803 aaKnown RBP17.46■□□□□ 0.39
ATPAF2-208ENST00000496852 ST5P78524 1137 aa17.46■□□□□ 0.39
ATPAF2-208ENST00000496852 RPAP2Q8IXW5 612 aaPredicted RBP17.46■□□□□ 0.39
ATPAF2-208ENST00000496852 CSF1RP07333 972 aa17.45■□□□□ 0.38
ATPAF2-208ENST00000496852 CTSWP56202 376 aa17.45■□□□□ 0.38
ATPAF2-208ENST00000496852 PPP4R2Q9NY27 417 aa17.45■□□□□ 0.38
ATPAF2-208ENST00000496852 ATP8B2P98198 1209 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms