RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 FAM177BA6PVY3 158 aa23.21■■□□□ 1.31
TSSC4-210ENST00000496468 NPHP1O15259 732 aa23.21■■□□□ 1.31
TSSC4-210ENST00000496468 ALDH1L1O75891 902 aa23.21■■□□□ 1.31
TSSC4-210ENST00000496468 TRIM28Q13263 835 aaKnown RBP23.21■■□□□ 1.31
TSSC4-210ENST00000496468 PPP1R42Q7Z4L9 355 aa23.21■■□□□ 1.31
TSSC4-210ENST00000496468 NBPF5PQ86XG9 351 aaPredicted RBP23.21■■□□□ 1.31
TSSC4-210ENST00000496468 NYXQ9GZU5 481 aa23.21■■□□□ 1.31
TSSC4-210ENST00000496468 SPON1Q9HCB6 807 aa23.21■■□□□ 1.31
TSSC4-210ENST00000496468 RNF123Q5XPI4 1314 aa23.2■■□□□ 1.3
TSSC4-210ENST00000496468 CNBD1Q8NA66 436 aa23.2■■□□□ 1.3
TSSC4-210ENST00000496468 LRP5O75197 1615 aa23.19■■□□□ 1.3
TSSC4-210ENST00000496468 NTSR2O95665 410 aa23.19■■□□□ 1.3
TSSC4-210ENST00000496468 SERPINB2P05120 415 aa23.19■■□□□ 1.3
TSSC4-210ENST00000496468 RLBP1P12271 317 aa23.19■■□□□ 1.3
TSSC4-210ENST00000496468 SUSD4Q5VX71 490 aa23.19■■□□□ 1.3
TSSC4-210ENST00000496468 UTP14AQ9BVJ6 771 aaKnown RBP23.19■■□□□ 1.3
TSSC4-210ENST00000496468 GCKRQ14397 625 aa23.18■■□□□ 1.3
TSSC4-210ENST00000496468 INTS3Q68E01 1043 aaKnown RBP23.18■■□□□ 1.3
TSSC4-210ENST00000496468 TMEM57Q8N5G2 664 aa23.18■■□□□ 1.3
TSSC4-210ENST00000496468 PANK1Q8TE04 598 aa23.18■■□□□ 1.3
TSSC4-210ENST00000496468 SGIP1Q9BQI5 828 aa23.18■■□□□ 1.3
TSSC4-210ENST00000496468 SUPT16HQ9Y5B9 1047 aaKnown RBP23.18■■□□□ 1.3
TSSC4-210ENST00000496468 C10orf71Q711Q0 1435 aa23.17■■□□□ 1.3
TSSC4-210ENST00000496468 DDX60Q8IY21 1712 aaKnown RBP23.17■■□□□ 1.3
TSSC4-210ENST00000496468 PTGER2P43116 358 aa23.17■■□□□ 1.3
TSSC4-210ENST00000496468 ST5P78524 1137 aa23.17■■□□□ 1.3
TSSC4-210ENST00000496468 ITPRIPQ8IWB1 547 aa23.17■■□□□ 1.3
TSSC4-210ENST00000496468 TRMT112Q9UI30 125 aaKnown RBP23.17■■□□□ 1.3
TSSC4-210ENST00000496468 ABCC12Q96J65 1359 aa23.16■■□□□ 1.3
TSSC4-210ENST00000496468 TNRC6CQ9HCJ0 1690 aaKnown RBP23.16■■□□□ 1.3
TSSC4-210ENST00000496468 SH3TC1Q8TE82 1336 aa23.16■■□□□ 1.3
TSSC4-210ENST00000496468 GTF2E1P29083 439 aaPredicted RBP23.16■■□□□ 1.3
TSSC4-210ENST00000496468 PDE3AQ14432 1141 aa23.16■■□□□ 1.3
TSSC4-210ENST00000496468 C20orf194Q5TEA3 1177 aa23.15■■□□□ 1.3
TSSC4-210ENST00000496468 PRR5LQ6MZQ0 368 aa23.15■■□□□ 1.3
TSSC4-210ENST00000496468 TPTE2Q6XPS3 522 aa23.15■■□□□ 1.3
TSSC4-210ENST00000496468 NUTM1Q86Y26 1132 aa23.15■■□□□ 1.3
TSSC4-210ENST00000496468 ZBTB38Q8NAP3 1195 aaPredicted RBP23.15■■□□□ 1.3
TSSC4-210ENST00000496468 RIC1Q4ADV7 1423 aa23.15■■□□□ 1.3
TSSC4-210ENST00000496468 KIF13BQ9NQT8 1826 aa23.15■■□□□ 1.3
TSSC4-210ENST00000496468 ANKRD31Q8N7Z5 1873 aa23.14■■□□□ 1.29
TSSC4-210ENST00000496468 GRM8O00222 908 aa23.14■■□□□ 1.29
TSSC4-210ENST00000496468 PCCAP05165 728 aaPredicted RBP23.14■■□□□ 1.29
TSSC4-210ENST00000496468 C9orf78Q9NZ63 289 aaPredicted RBP23.14■■□□□ 1.29
TSSC4-210ENST00000496468 RTL5Q5HYW3 569 aaPredicted RBP23.13■■□□□ 1.29
TSSC4-210ENST00000496468 UBE3BQ7Z3V4 1068 aa23.13■■□□□ 1.29
TSSC4-210ENST00000496468 FAM89AQ96GI7 184 aa23.13■■□□□ 1.29
TSSC4-210ENST00000496468 MVPQ14764 893 aaKnown RBP23.12■■□□□ 1.29
TSSC4-210ENST00000496468 ERFEQ4G0M1 354 aa23.12■■□□□ 1.29
TSSC4-210ENST00000496468 CDHR2Q9BYE9 1310 aa23.11■■□□□ 1.29
TSSC4-210ENST00000496468 COG6Q9Y2V7 657 aa23.11■■□□□ 1.29
TSSC4-210ENST00000496468 MYH3P11055 1940 aa23.11■■□□□ 1.29
TSSC4-210ENST00000496468 COL11A2P13942 1736 aaPredicted RBP23.11■■□□□ 1.29
TSSC4-210ENST00000496468 CCDC24Q8N4L8 307 aa23.1■■□□□ 1.29
TSSC4-210ENST00000496468 UTYO14607 1347 aa23.09■■□□□ 1.29
TSSC4-210ENST00000496468 H7C1W4 665 aa23.09■■□□□ 1.29
TSSC4-210ENST00000496468 IRS4O14654 1257 aaPredicted RBP23.09■■□□□ 1.29
TSSC4-210ENST00000496468 HSP90B1P14625 803 aaKnown RBP23.09■■□□□ 1.29
TSSC4-210ENST00000496468 JARID2Q92833 1246 aaPredicted RBP23.09■■□□□ 1.29
TSSC4-210ENST00000496468 MEIS3Q99687 375 aa23.09■■□□□ 1.29
TSSC4-210ENST00000496468 UBTFL1P0CB47 393 aaPredicted RBP23.08■■□□□ 1.29
TSSC4-210ENST00000496468 CASP7P55210 303 aa23.08■■□□□ 1.29
TSSC4-210ENST00000496468 SYNE4Q8N205 404 aa23.08■■□□□ 1.29
TSSC4-210ENST00000496468 USP44Q9H0E7 712 aa23.08■■□□□ 1.29
TSSC4-210ENST00000496468 PPP1R1BQ9UD71 204 aaPredicted RBP23.08■■□□□ 1.29
TSSC4-210ENST00000496468 DDX19BQ9UMR2 479 aa23.08■■□□□ 1.29
TSSC4-210ENST00000496468 GNAI3P08754 354 aa23.07■■□□□ 1.28
TSSC4-210ENST00000496468 NBPF7P0C2Y1 421 aaPredicted RBP23.07■■□□□ 1.28
TSSC4-210ENST00000496468 HCLS1P14317 486 aaPredicted RBP23.07■■□□□ 1.28
TSSC4-210ENST00000496468 KLHL34Q8N239 644 aa23.07■■□□□ 1.28
TSSC4-210ENST00000496468 KIAA1551Q9HCM1 1747 aa23.07■■□□□ 1.28
TSSC4-210ENST00000496468 DLEC1Q9Y238 1755 aa23.06■■□□□ 1.28
TSSC4-210ENST00000496468 BRIP1Q9BX63 1249 aa23.06■■□□□ 1.28
TSSC4-210ENST00000496468 PDE8AO60658 829 aa23.04■■□□□ 1.28
TSSC4-210ENST00000496468 SLC10A5Q5PT55 438 aa23.04■■□□□ 1.28
TSSC4-210ENST00000496468 SUCLG2Q96I99 432 aa23.04■■□□□ 1.28
TSSC4-210ENST00000496468 CHMP4BQ9H444 224 aaKnown RBP23.04■■□□□ 1.28
TSSC4-210ENST00000496468 HDAC5Q9UQL6 1122 aa23.04■■□□□ 1.28
TSSC4-210ENST00000496468 PDE6BP35913 854 aa23.03■■□□□ 1.28
TSSC4-210ENST00000496468 CTSWP56202 376 aa23.03■■□□□ 1.28
TSSC4-210ENST00000496468 NLRP3Q96P20 1036 aa23.03■■□□□ 1.28
TSSC4-210ENST00000496468 CRBNQ96SW2 442 aa23.03■■□□□ 1.28
TSSC4-210ENST00000496468 PLA2G12BQ9BX93 195 aa23.03■■□□□ 1.28
TSSC4-210ENST00000496468 C3orf67Q6ZVT6 689 aa23.02■■□□□ 1.28
TSSC4-210ENST00000496468 CD2APQ9Y5K6 639 aa23.02■■□□□ 1.28
TSSC4-210ENST00000496468 ZBTB7BO15156 539 aaPredicted RBP23.01■■□□□ 1.27
TSSC4-210ENST00000496468 LRRFIP2Q9Y608 721 aaKnown RBP23.01■■□□□ 1.27
TSSC4-210ENST00000496468 GNAI2P04899 355 aa23■■□□□ 1.27
TSSC4-210ENST00000496468 IRX6P78412 446 aaPredicted RBP23■■□□□ 1.27
TSSC4-210ENST00000496468 BICC1Q9H694 974 aaKnown RBP23■■□□□ 1.27
TSSC4-210ENST00000496468 PDZRN3Q9UPQ7 1066 aa23■■□□□ 1.27
TSSC4-210ENST00000496468 CRY2Q49AN0 593 aa22.99■■□□□ 1.27
TSSC4-210ENST00000496468 CCDC152Q4G0S7 254 aa22.99■■□□□ 1.27
TSSC4-210ENST00000496468 C2CD5Q86YS7 1000 aa22.99■■□□□ 1.27
TSSC4-210ENST00000496468 RPGRQ92834 1020 aaKnown RBP22.99■■□□□ 1.27
TSSC4-210ENST00000496468 FHDC1Q9C0D6 1143 aaPredicted RBP22.99■■□□□ 1.27
TSSC4-210ENST00000496468 KLRG2A4D1S0 409 aaPredicted RBP22.98■■□□□ 1.27
TSSC4-210ENST00000496468 FOXO4P98177 505 aa22.98■■□□□ 1.27
TSSC4-210ENST00000496468 EPHA10Q5JZY3 1008 aa22.98■■□□□ 1.27
TSSC4-210ENST00000496468 KAZALD1Q96I82 304 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms