RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ANKRD18AQ8IVF6 992 aa10.69□□□□□ -0.7
U2AF1-212ENST00000496462 SUPT20HQ8NEM7 779 aa10.69□□□□□ -0.7
U2AF1-212ENST00000496462 SRP68Q9UHB9 627 aaKnown RBP10.69□□□□□ -0.7
U2AF1-212ENST00000496462 INTS5Q6P9B9 1019 aaKnown RBP10.69□□□□□ -0.7
U2AF1-212ENST00000496462 C2CD5Q86YS7 1000 aa10.69□□□□□ -0.7
U2AF1-212ENST00000496462 GNL3LQ9NVN8 582 aaKnown RBP10.69□□□□□ -0.7
U2AF1-212ENST00000496462 BCAR3O75815 825 aa10.68□□□□□ -0.7
U2AF1-212ENST00000496462 COG6Q9Y2V7 657 aa10.68□□□□□ -0.7
U2AF1-212ENST00000496462 NUP188Q5SRE5 1749 aa10.68□□□□□ -0.7
U2AF1-212ENST00000496462 F6X3S4 739 aa10.68□□□□□ -0.7
U2AF1-212ENST00000496462 PCCAP05165 728 aaPredicted RBP10.68□□□□□ -0.7
U2AF1-212ENST00000496462 EYA3Q99504 573 aa10.68□□□□□ -0.7
U2AF1-212ENST00000496462 BRPF1P55201 1214 aaPredicted RBP10.67□□□□□ -0.7
U2AF1-212ENST00000496462 AMIGO3Q86WK7 504 aa10.67□□□□□ -0.7
U2AF1-212ENST00000496462 RPAP2Q8IXW5 612 aaPredicted RBP10.67□□□□□ -0.7
U2AF1-212ENST00000496462 ZBTB38Q8NAP3 1195 aaPredicted RBP10.67□□□□□ -0.7
U2AF1-212ENST00000496462 SLC4A9Q96Q91 983 aa10.67□□□□□ -0.7
U2AF1-212ENST00000496462 TRIM28Q13263 835 aaKnown RBP10.67□□□□□ -0.7
U2AF1-212ENST00000496462 TRMT2AQ8IZ69 625 aaKnown RBP10.67□□□□□ -0.7
U2AF1-212ENST00000496462 CEP126Q9P2H0 1117 aa10.67□□□□□ -0.7
U2AF1-212ENST00000496462 PRAMEF22A3QJZ6 481 aa10.67□□□□□ -0.7
U2AF1-212ENST00000496462 MVPQ14764 893 aaKnown RBP10.67□□□□□ -0.7
U2AF1-212ENST00000496462 BRIP1Q9BX63 1249 aa10.67□□□□□ -0.7
U2AF1-212ENST00000496462 LRRFIP1Q32MZ4 808 aaKnown RBP10.67□□□□□ -0.7
U2AF1-212ENST00000496462 ANKRD2Q9GZV1 360 aa10.67□□□□□ -0.7
U2AF1-212ENST00000496462 MRC1P22897 1456 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 PIM2Q9P1W9 311 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 NBPF26B4DH59 902 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 CAMTA2O94983 1202 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 NPR1P16066 1061 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 NFIXQ14938 502 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 NBPF10Q6P3W6 841 aaKnown RBP10.66□□□□□ -0.7
U2AF1-212ENST00000496462 NBPF15Q8N660 670 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 SPINK5Q9NQ38 1064 aaPredicted RBP10.66□□□□□ -0.7
U2AF1-212ENST00000496462 ANKIB1Q9P2G1 1089 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 AKAP2Q9Y2D5 859 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 GRIN3BO60391 1043 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 FKBP8Q14318 412 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 GCKRQ14397 625 aa10.66□□□□□ -0.7
U2AF1-212ENST00000496462 PKD1L3Q7Z443 1732 aa10.65□□□□□ -0.7
U2AF1-212ENST00000496462 RREB1Q92766 1687 aa10.65□□□□□ -0.7
U2AF1-212ENST00000496462 YY1P25490 414 aa10.65□□□□□ -0.7
U2AF1-212ENST00000496462 CD2APQ9Y5K6 639 aa10.65□□□□□ -0.7
U2AF1-212ENST00000496462 GYS1P13807 737 aa10.65□□□□□ -0.7
U2AF1-212ENST00000496462 TRIM27P14373 513 aa10.65□□□□□ -0.7
U2AF1-212ENST00000496462 DALRD3Q5D0E6 543 aaKnown RBP10.65□□□□□ -0.7
U2AF1-212ENST00000496462 NLRP10Q86W26 655 aa10.65□□□□□ -0.7
U2AF1-212ENST00000496462 MASTLQ96GX5 879 aa10.65□□□□□ -0.7
U2AF1-212ENST00000496462 NEURL1BA8MQ27 555 aa10.65□□□□□ -0.71
U2AF1-212ENST00000496462 BBOX1O75936 387 aa10.65□□□□□ -0.71
U2AF1-212ENST00000496462 IFIT1P09914 478 aaKnown RBP10.65□□□□□ -0.71
U2AF1-212ENST00000496462 TGFB2P61812 414 aa10.65□□□□□ -0.71
U2AF1-212ENST00000496462 PROSER3Q2NL68 480 aa10.65□□□□□ -0.71
U2AF1-212ENST00000496462 G2E3Q7L622 706 aa10.65□□□□□ -0.71
U2AF1-212ENST00000496462 PANK1Q8TE04 598 aa10.65□□□□□ -0.71
U2AF1-212ENST00000496462 TMEM57Q8N5G2 664 aa10.64□□□□□ -0.71
U2AF1-212ENST00000496462 TTLL6Q8N841 843 aa10.64□□□□□ -0.71
U2AF1-212ENST00000496462 NLGN2Q8NFZ4 835 aa10.64□□□□□ -0.71
U2AF1-212ENST00000496462 JDP2Q8WYK2 163 aa10.64□□□□□ -0.71
U2AF1-212ENST00000496462 FAM89AQ96GI7 184 aa10.64□□□□□ -0.71
U2AF1-212ENST00000496462 BCS1LQ9Y276 419 aa10.64□□□□□ -0.71
U2AF1-212ENST00000496462 SRGAP3O43295 1099 aa10.64□□□□□ -0.71
U2AF1-212ENST00000496462 C6orf229H3BNL8 230 aa10.64□□□□□ -0.71
U2AF1-212ENST00000496462 TBC1D9BQ66K14 1250 aa10.64□□□□□ -0.71
U2AF1-212ENST00000496462 LDHAL6AQ6ZMR3 332 aa10.64□□□□□ -0.71
U2AF1-212ENST00000496462 NOL10Q9BSC4 688 aaKnown RBP10.64□□□□□ -0.71
U2AF1-212ENST00000496462 PLIN1O60240 522 aa10.63□□□□□ -0.71
U2AF1-212ENST00000496462 SURF6O75683 361 aaKnown RBP10.63□□□□□ -0.71
U2AF1-212ENST00000496462 IFIT2P09913 472 aaKnown RBP10.63□□□□□ -0.71
U2AF1-212ENST00000496462 METTL24Q5JXM2 366 aa10.63□□□□□ -0.71
U2AF1-212ENST00000496462 INTS3Q68E01 1043 aaKnown RBP10.63□□□□□ -0.71
U2AF1-212ENST00000496462 CWF19L2Q2TBE0 894 aaKnown RBP10.63□□□□□ -0.71
U2AF1-212ENST00000496462 CAVIN4Q5BKX8 364 aa10.63□□□□□ -0.71
U2AF1-212ENST00000496462 CLASRPQ8N2M8 674 aaKnown RBP10.63□□□□□ -0.71
U2AF1-212ENST00000496462 ISCA1Q9BUE6 129 aa10.63□□□□□ -0.71
U2AF1-212ENST00000496462 HCLS1P14317 486 aaPredicted RBP10.62□□□□□ -0.71
U2AF1-212ENST00000496462 LMBR1LQ6UX01 489 aa10.62□□□□□ -0.71
U2AF1-212ENST00000496462 CASC1Q6TDU7 716 aa10.62□□□□□ -0.71
U2AF1-212ENST00000496462 ZNF34Q8IZ26 560 aa10.62□□□□□ -0.71
U2AF1-212ENST00000496462 SHANK3Q9BYB0 1731 aa10.62□□□□□ -0.71
U2AF1-212ENST00000496462 ATP10DQ9P241 1426 aa10.62□□□□□ -0.71
U2AF1-212ENST00000496462 SLC5A1P13866 664 aa10.62□□□□□ -0.71
U2AF1-212ENST00000496462 NUTM1Q86Y26 1132 aa10.62□□□□□ -0.71
U2AF1-212ENST00000496462 RTKN2Q8IZC4 609 aa10.62□□□□□ -0.71
U2AF1-212ENST00000496462 FBXW7Q969H0 707 aa10.62□□□□□ -0.71
U2AF1-212ENST00000496462 CCDC85AQ96PX6 553 aaPredicted RBP10.62□□□□□ -0.71
U2AF1-212ENST00000496462 SGIP1Q9BQI5 828 aa10.62□□□□□ -0.71
U2AF1-212ENST00000496462 ZNF219Q9P2Y4 722 aaPredicted RBP10.62□□□□□ -0.71
U2AF1-212ENST00000496462 CDHR2Q9BYE9 1310 aa10.61□□□□□ -0.71
U2AF1-212ENST00000496462 RPS8P62241 208 aaKnown RBP10.61□□□□□ -0.71
U2AF1-212ENST00000496462 ZC3H12CQ9C0D7 883 aaKnown RBP10.61□□□□□ -0.71
U2AF1-212ENST00000496462 RAB11FIP3O75154 756 aa10.61□□□□□ -0.71
U2AF1-212ENST00000496462 HLFQ16534 295 aa10.61□□□□□ -0.71
U2AF1-212ENST00000496462 CCDC93Q567U6 631 aa10.61□□□□□ -0.71
U2AF1-212ENST00000496462 CCDC158Q5M9N0 1113 aa10.61□□□□□ -0.71
U2AF1-212ENST00000496462 BEND3Q5T5X7 828 aa10.61□□□□□ -0.71
U2AF1-212ENST00000496462 CTSWP56202 376 aa10.61□□□□□ -0.71
U2AF1-212ENST00000496462 SUSD4Q5VX71 490 aa10.61□□□□□ -0.71
U2AF1-212ENST00000496462 NEUROD6Q96NK8 337 aa10.61□□□□□ -0.71
U2AF1-212ENST00000496462 FBXO3Q9UK99 471 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms