RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 MTHFSP49914 203 aa10.73□□□□□ -0.69
HPS4-217ENST00000496385 NAA30Q147X3 362 aaPredicted RBP10.73□□□□□ -0.69
HPS4-217ENST00000496385 PTPN14Q15678 1187 aa10.73□□□□□ -0.69
HPS4-217ENST00000496385 FOXD4L5Q5VV16 416 aaPredicted RBP10.73□□□□□ -0.69
HPS4-217ENST00000496385 FOXD4L4Q8WXT5 416 aaPredicted RBP10.73□□□□□ -0.69
HPS4-217ENST00000496385 STRN4Q9NRL3 753 aa10.73□□□□□ -0.69
HPS4-217ENST00000496385 PSD3Q9NYI0 1048 aa10.73□□□□□ -0.69
HPS4-217ENST00000496385 AFF2P51816 1311 aa10.73□□□□□ -0.69
HPS4-217ENST00000496385 MYO1CO00159 1063 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 APPP05067 770 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 SDSP20132 328 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 IQUBQ8NA54 791 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 ARGLU1Q9NWB6 273 aaPredicted RBP10.72□□□□□ -0.69
HPS4-217ENST00000496385 BTG4Q9NY30 223 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 TRIM35Q9UPQ4 493 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 FHOD1Q9Y613 1164 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 ABCC4O15439 1325 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 U2SURPO15042 1029 aaKnown RBP10.72□□□□□ -0.69
HPS4-217ENST00000496385 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
HPS4-217ENST00000496385 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.696e-11■■■■□ 21.2
HPS4-217ENST00000496385 PLA2G4DQ86XP0 818 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 LTV1Q96GA3 475 aaPredicted RBP10.72□□□□□ -0.69
HPS4-217ENST00000496385 ZNF446Q9NWS9 450 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 AXIN2Q9Y2T1 843 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 TCHHQ07283 1943 aa10.72□□□□□ -0.69
HPS4-217ENST00000496385 SMARCA5O60264 1052 aaPredicted RBP10.71□□□□□ -0.69
HPS4-217ENST00000496385 PLEKHF1Q96S99 279 aa10.71□□□□□ -0.69
HPS4-217ENST00000496385 EMILIN1Q9Y6C2 1016 aa10.71□□□□□ -0.69
HPS4-217ENST00000496385 USP31Q70CQ4 1352 aa10.71□□□□□ -0.69
HPS4-217ENST00000496385 ZSCAN22P10073 491 aaPredicted RBP10.71□□□□□ -0.69
HPS4-217ENST00000496385 GOLGA5Q8TBA6 731 aa10.71□□□□□ -0.69
HPS4-217ENST00000496385 SRCIN1Q9C0H9 1055 aa10.71□□□□□ -0.69
HPS4-217ENST00000496385 POLKQ9UBT6 870 aa10.71□□□□□ -0.69
HPS4-217ENST00000496385 RGS17Q9UGC6 210 aaPredicted RBP10.71□□□□□ -0.69
HPS4-217ENST00000496385 A0A1B0GUL7 405 aa10.71□□□□□ -0.7
HPS4-217ENST00000496385 ELF2Q15723 593 aa10.71□□□□□ -0.7
HPS4-217ENST00000496385 FILIP1Q7Z7B0 1213 aa10.71□□□□□ -0.7
HPS4-217ENST00000496385 UBXN6Q9BZV1 441 aa10.71□□□□□ -0.7
HPS4-217ENST00000496385 OSBPL3Q9H4L5 887 aa10.71□□□□□ -0.7
HPS4-217ENST00000496385 L2HGDHQ9H9P8 463 aa10.71□□□□□ -0.7
HPS4-217ENST00000496385 USP21Q9UK80 565 aa10.71□□□□□ -0.7
HPS4-217ENST00000496385 MAP3K19Q56UN5 1328 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 TPM1P09493 284 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 PNMA6AP0CW24 399 aaPredicted RBP10.7□□□□□ -0.7
HPS4-217ENST00000496385 ZNF75DP51815 510 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 SYT10Q6XYQ8 523 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 KCNH5Q8NCM2 988 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 FBXO18Q8NFZ0 1043 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 GDPD2Q9HCC8 539 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 CCDC9Q9Y3X0 531 aaKnown RBP10.7□□□□□ -0.7
HPS4-217ENST00000496385 SLIT3O75094 1523 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 NFAT5O94916 1531 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 ZRANB2O95218 330 aaKnown RBP eCLIP10.7□□□□□ -0.7
HPS4-217ENST00000496385 PLA2G4AP47712 749 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 LMOD3Q0VAK6 560 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 GIMAP6Q6P9H5 292 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 KRBA2Q6ZNG9 492 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 ARHGEF25Q86VW2 580 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 RPAP2Q8IXW5 612 aaPredicted RBP10.7□□□□□ -0.7
HPS4-217ENST00000496385 DRC7Q8IY82 874 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 TDRD7Q8NHU6 1098 aaKnown RBP10.7□□□□□ -0.7
HPS4-217ENST00000496385 AK7Q96M32 723 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 ATG3Q9NT62 314 aa10.7□□□□□ -0.7
HPS4-217ENST00000496385 AMPHP49418 695 aa10.69□□□□□ -0.7
HPS4-217ENST00000496385 ZSCAN26Q16670 478 aa10.69□□□□□ -0.7
HPS4-217ENST00000496385 SRLQ86TD4 932 aa10.69□□□□□ -0.7
HPS4-217ENST00000496385 MRPL50Q8N5N7 158 aaKnown RBP10.69□□□□□ -0.7
HPS4-217ENST00000496385 TRERF1Q96PN7 1200 aa10.69□□□□□ -0.7
HPS4-217ENST00000496385 API5Q9BZZ5 524 aaKnown RBP10.69□□□□□ -0.7
HPS4-217ENST00000496385 CNPY2Q9Y2B0 182 aa10.69□□□□□ -0.7
HPS4-217ENST00000496385 LTN1O94822 1766 aa10.69□□□□□ -0.7
HPS4-217ENST00000496385 RGPD5Q99666 1765 aa10.69□□□□□ -0.7
HPS4-217ENST00000496385 IVLP07476 585 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 LRMPQ12912 555 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 DHX8Q14562 1220 aaKnown RBP10.68□□□□□ -0.7
HPS4-217ENST00000496385 MAP3K11Q16584 847 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 RTF1Q92541 710 aaKnown RBP10.68□□□□□ -0.7
HPS4-217ENST00000496385 JRKLQ9Y4A0 524 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 LOC102724159A0A0B4J2E5 919 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 EVA1CP58658 441 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 PWP2Q15269 919 aaKnown RBP10.68□□□□□ -0.7
HPS4-217ENST00000496385 HSP90AB2PQ58FF8 381 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 POTEAQ6S8J7 498 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 TMCO3Q6UWJ1 677 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 CEP120Q8N960 986 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 EXOC4Q96A65 974 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 TRIM5Q9C035 493 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 ST7Q9NRC1 585 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 LRRFIP2Q9Y608 721 aaKnown RBP10.68□□□□□ -0.7
HPS4-217ENST00000496385 AATKQ6ZMQ8 1374 aa10.68□□□□□ -0.7
HPS4-217ENST00000496385 PLCH1Q4KWH8 1693 aa10.67□□□□□ -0.7
HPS4-217ENST00000496385 CAMTA1Q9Y6Y1 1673 aa10.67□□□□□ -0.7
HPS4-217ENST00000496385 MAGEA9P43362 315 aa10.67□□□□□ -0.7
HPS4-217ENST00000496385 SARM1Q6SZW1 724 aa10.67□□□□□ -0.7
HPS4-217ENST00000496385 LRRC8AQ8IWT6 810 aa10.67□□□□□ -0.7
HPS4-217ENST00000496385 C10orf67Q8IYJ2 551 aa10.67□□□□□ -0.7
HPS4-217ENST00000496385 CCDC191Q8NCU4 936 aa10.67□□□□□ -0.7
HPS4-217ENST00000496385 CACTINQ8WUQ7 758 aaKnown RBP10.67□□□□□ -0.7
HPS4-217ENST00000496385 ZNF592Q92610 1267 aa10.67□□□□□ -0.7
HPS4-217ENST00000496385 F13A1P00488 732 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms