RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 INTS3Q68E01 1043 aaKnown RBP17.12■□□□□ 0.33
PTPN7-218ENST00000496197 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
PTPN7-218ENST00000496197 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-218ENST00000496197 KIF13BQ9NQT8 1826 aa17.11■□□□□ 0.33
PTPN7-218ENST00000496197 MYH3P11055 1940 aa17.11■□□□□ 0.33
PTPN7-218ENST00000496197 PTGER2P43116 358 aa17.11■□□□□ 0.33
PTPN7-218ENST00000496197 NEXNQ0ZGT2 675 aa17.11■□□□□ 0.33
PTPN7-218ENST00000496197 TRIM28Q13263 835 aaKnown RBP17.11■□□□□ 0.33
PTPN7-218ENST00000496197 CCDC24Q8N4L8 307 aa17.11■□□□□ 0.33
PTPN7-218ENST00000496197 SETDB2Q96T68 719 aa17.11■□□□□ 0.33
PTPN7-218ENST00000496197 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
PTPN7-218ENST00000496197 GCKRQ14397 625 aa17.1■□□□□ 0.33
PTPN7-218ENST00000496197 NUTM1Q86Y26 1132 aa17.1■□□□□ 0.33
PTPN7-218ENST00000496197 FTSJ3Q8IY81 847 aaKnown RBP17.1■□□□□ 0.33
PTPN7-218ENST00000496197 KIAA1551Q9HCM1 1747 aa17.1■□□□□ 0.33
PTPN7-218ENST00000496197 ABCC12Q96J65 1359 aa17.1■□□□□ 0.33
PTPN7-218ENST00000496197 COL11A2P13942 1736 aaPredicted RBP17.09■□□□□ 0.33
PTPN7-218ENST00000496197 SERPINB2P05120 415 aa17.09■□□□□ 0.33
PTPN7-218ENST00000496197 RTL5Q5HYW3 569 aaPredicted RBP17.09■□□□□ 0.33
PTPN7-218ENST00000496197 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.09■□□□□ 0.33
PTPN7-218ENST00000496197 CCDC191Q8NCU4 936 aa17.09■□□□□ 0.33
PTPN7-218ENST00000496197 CWC25Q9NXE8 425 aaPredicted RBP17.09■□□□□ 0.33
PTPN7-218ENST00000496197 COG6Q9Y2V7 657 aa17.09■□□□□ 0.33
PTPN7-218ENST00000496197 ALDH1L1O75891 902 aa17.08■□□□□ 0.32
PTPN7-218ENST00000496197 CCT4P50991 539 aaKnown RBP17.08■□□□□ 0.32
PTPN7-218ENST00000496197 CASP7P55210 303 aa17.08■□□□□ 0.32
PTPN7-218ENST00000496197 PARP10Q53GL7 1025 aa17.08■□□□□ 0.32
PTPN7-218ENST00000496197 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
PTPN7-218ENST00000496197 IBTKQ9P2D0 1353 aaPredicted RBP17.07■□□□□ 0.32
PTPN7-218ENST00000496197 NBPF7P0C2Y1 421 aaPredicted RBP17.07■□□□□ 0.32
PTPN7-218ENST00000496197 IRX6P78412 446 aaPredicted RBP17.07■□□□□ 0.32
PTPN7-218ENST00000496197 PDE3AQ14432 1141 aa17.07■□□□□ 0.32
PTPN7-218ENST00000496197 ERFEQ4G0M1 354 aa17.07■□□□□ 0.32
PTPN7-218ENST00000496197 PRR5LQ6MZQ0 368 aa17.07■□□□□ 0.32
PTPN7-218ENST00000496197 ITPRIPQ8IWB1 547 aa17.07■□□□□ 0.32
PTPN7-218ENST00000496197 MEIS3Q99687 375 aa17.07■□□□□ 0.32
PTPN7-218ENST00000496197 USP44Q9H0E7 712 aa17.07■□□□□ 0.32
PTPN7-218ENST00000496197 TAF1P21675 1872 aa17.07■□□□□ 0.32
PTPN7-218ENST00000496197 MVPQ14764 893 aaKnown RBP17.06■□□□□ 0.32
PTPN7-218ENST00000496197 NBPF5PQ86XG9 351 aaPredicted RBP17.06■□□□□ 0.32
PTPN7-218ENST00000496197 UTP14AQ9BVJ6 771 aaKnown RBP17.06■□□□□ 0.32
PTPN7-218ENST00000496197 TRMT112Q9UI30 125 aaKnown RBP17.06■□□□□ 0.32
PTPN7-218ENST00000496197 PARP3Q9Y6F1 533 aa17.06■□□□□ 0.32
PTPN7-218ENST00000496197 COL4A1P02462 1669 aa17.06■□□□□ 0.32
PTPN7-218ENST00000496197 H7C1W4 665 aa17.05■□□□□ 0.32
PTPN7-218ENST00000496197 UBE3BQ7Z3V4 1068 aa17.05■□□□□ 0.32
PTPN7-218ENST00000496197 PPP1R42Q7Z4L9 355 aa17.05■□□□□ 0.32
PTPN7-218ENST00000496197 ZBTB38Q8NAP3 1195 aaPredicted RBP17.05■□□□□ 0.32
PTPN7-218ENST00000496197 UTYO14607 1347 aa17.05■□□□□ 0.32
PTPN7-218ENST00000496197 GRM8O00222 908 aa17.05■□□□□ 0.32
PTPN7-218ENST00000496197 PCCAP05165 728 aaPredicted RBP17.05■□□□□ 0.32
PTPN7-218ENST00000496197 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
PTPN7-218ENST00000496197 C3orf67Q6ZVT6 689 aa17.05■□□□□ 0.32
PTPN7-218ENST00000496197 C10orf71Q711Q0 1435 aa17.05■□□□□ 0.32
PTPN7-218ENST00000496197 CNBD1Q8NA66 436 aa17.05■□□□□ 0.32
PTPN7-218ENST00000496197 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
PTPN7-218ENST00000496197 LRP5O75197 1615 aa17.04■□□□□ 0.32
PTPN7-218ENST00000496197 DLEC1Q9Y238 1755 aa17.04■□□□□ 0.32
PTPN7-218ENST00000496197 KAZALD1Q96I82 304 aa17.04■□□□□ 0.32
PTPN7-218ENST00000496197 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
PTPN7-218ENST00000496197 ZBTB7BO15156 539 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-218ENST00000496197 MS4A1P11836 297 aa17.03■□□□□ 0.32
PTPN7-218ENST00000496197 HCLS1P14317 486 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-218ENST00000496197 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
PTPN7-218ENST00000496197 SUCLG2Q96I99 432 aa17.03■□□□□ 0.32
PTPN7-218ENST00000496197 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
PTPN7-218ENST00000496197 C9orf78Q9NZ63 289 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-218ENST00000496197 SPEF2Q9C093 1822 aa17.02■□□□□ 0.32
PTPN7-218ENST00000496197 EPHA10Q5JZY3 1008 aa17.02■□□□□ 0.32
PTPN7-218ENST00000496197 NYXQ9GZU5 481 aa17.02■□□□□ 0.32
PTPN7-218ENST00000496197 CDHR2Q9BYE9 1310 aa17.02■□□□□ 0.31
PTPN7-218ENST00000496197 BRCA1P38398 1863 aaKnown RBP17.02■□□□□ 0.31
PTPN7-218ENST00000496197 RIC1Q4ADV7 1423 aa17.02■□□□□ 0.31
PTPN7-218ENST00000496197 IRS4O14654 1257 aaPredicted RBP17.01■□□□□ 0.31
PTPN7-218ENST00000496197 POLD1P28340 1107 aa17.01■□□□□ 0.31
PTPN7-218ENST00000496197 C1orf115Q9H7X2 142 aa17.01■□□□□ 0.31
PTPN7-218ENST00000496197 NPHP1O15259 732 aa16.99■□□□□ 0.31
PTPN7-218ENST00000496197 GTF2E1P29083 439 aaPredicted RBP16.99■□□□□ 0.31
PTPN7-218ENST00000496197 FOXO4P98177 505 aa16.99■□□□□ 0.31
PTPN7-218ENST00000496197 SLC10A5Q5PT55 438 aa16.99■□□□□ 0.31
PTPN7-218ENST00000496197 EXOC6Q8TAG9 804 aa16.99■□□□□ 0.31
PTPN7-218ENST00000496197 UBTFL1P0CB47 393 aaPredicted RBP16.99■□□□□ 0.31
PTPN7-218ENST00000496197 ST5P78524 1137 aa16.99■□□□□ 0.31
PTPN7-218ENST00000496197 DDX19BQ9UMR2 479 aa16.99■□□□□ 0.31
PTPN7-218ENST00000496197 LRRFIP2Q9Y608 721 aaKnown RBP16.99■□□□□ 0.31
PTPN7-218ENST00000496197 ANKRD44Q8N8A2 993 aa16.98■□□□□ 0.31
PTPN7-218ENST00000496197 PLA2G12BQ9BX93 195 aa16.98■□□□□ 0.31
PTPN7-218ENST00000496197 BICC1Q9H694 974 aaKnown RBP16.98■□□□□ 0.31
PTPN7-218ENST00000496197 ZBTB40Q9NUA8 1239 aa16.98■□□□□ 0.31
PTPN7-218ENST00000496197 PDE8AO60658 829 aa16.97■□□□□ 0.31
PTPN7-218ENST00000496197 CCDC85AQ96PX6 553 aaPredicted RBP16.97■□□□□ 0.31
PTPN7-218ENST00000496197 BRIP1Q9BX63 1249 aa16.97■□□□□ 0.31
PTPN7-218ENST00000496197 KLRG2A4D1S0 409 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-218ENST00000496197 GNAI3P08754 354 aa16.96■□□□□ 0.31
PTPN7-218ENST00000496197 CTSWP56202 376 aa16.96■□□□□ 0.31
PTPN7-218ENST00000496197 CHRNA5P30532 468 aa16.95■□□□□ 0.3
PTPN7-218ENST00000496197 TTLL11Q8NHH1 800 aa16.95■□□□□ 0.3
PTPN7-218ENST00000496197 A0A1B0GUL6 1792 aa16.94■□□□□ 0.3
PTPN7-218ENST00000496197 CSF1RP07333 972 aa16.94■□□□□ 0.3
PTPN7-218ENST00000496197 RABL6Q3YEC7 729 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms