RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 CYP19A1P11511 503 aaPredicted RBP13.31□□□□□ -0.28
SMARCAL1-213ENST00000496037 ST5P78524 1137 aa13.31□□□□□ -0.28
SMARCAL1-213ENST00000496037 HABP4Q5JVS0 413 aaKnown RBP13.31□□□□□ -0.28
SMARCAL1-213ENST00000496037 SAPCD2Q86UD0 394 aa13.31□□□□□ -0.28
SMARCAL1-213ENST00000496037 CNBD1Q8NA66 436 aa13.31□□□□□ -0.28
SMARCAL1-213ENST00000496037 SLX4Q8IY92 1834 aa13.31□□□□□ -0.28
SMARCAL1-213ENST00000496037 FZD9O00144 591 aa13.3□□□□□ -0.28
SMARCAL1-213ENST00000496037 SRGNP10124 158 aa13.3□□□□□ -0.28
SMARCAL1-213ENST00000496037 NEUROD1Q13562 356 aa13.3□□□□□ -0.28
SMARCAL1-213ENST00000496037 TBC1D9BQ66K14 1250 aa13.3□□□□□ -0.28
SMARCAL1-213ENST00000496037 HHIPL1Q96JK4 782 aa13.3□□□□□ -0.28
SMARCAL1-213ENST00000496037 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
SMARCAL1-213ENST00000496037 GJA3Q9Y6H8 435 aa13.3□□□□□ -0.28
SMARCAL1-213ENST00000496037 TRPM7Q96QT4 1865 aa13.29□□□□□ -0.28
SMARCAL1-213ENST00000496037 A0A087WZG4 1122 aa13.29□□□□□ -0.28
SMARCAL1-213ENST00000496037 CELF2O95319 508 aaKnown RBP13.29□□□□□ -0.28
SMARCAL1-213ENST00000496037 IARSP41252 1262 aaKnown RBP13.29□□□□□ -0.28
SMARCAL1-213ENST00000496037 NOGQ13253 232 aa13.29□□□□□ -0.28
SMARCAL1-213ENST00000496037 JDP2Q8WYK2 163 aa13.29□□□□□ -0.28
SMARCAL1-213ENST00000496037 TESK2Q96S53 571 aa13.29□□□□□ -0.28
SMARCAL1-213ENST00000496037 PODXL2Q9NZ53 605 aa13.29□□□□□ -0.28
SMARCAL1-213ENST00000496037 PYGBP11216 843 aa13.28□□□□□ -0.28
SMARCAL1-213ENST00000496037 CANXP27824 592 aaKnown RBP13.28□□□□□ -0.28
SMARCAL1-213ENST00000496037 EIF6P56537 245 aaKnown RBP13.28□□□□□ -0.28
SMARCAL1-213ENST00000496037 EIF4A2Q14240 407 aaKnown RBP13.28□□□□□ -0.28
SMARCAL1-213ENST00000496037 USP50Q70EL3 339 aaPredicted RBP13.28□□□□□ -0.28
SMARCAL1-213ENST00000496037 RTKN2Q8IZC4 609 aa13.28□□□□□ -0.28
SMARCAL1-213ENST00000496037 SIN3AQ96ST3 1273 aa13.28□□□□□ -0.28
SMARCAL1-213ENST00000496037 PCDHB13Q9Y5F0 798 aa13.28□□□□□ -0.28
SMARCAL1-213ENST00000496037 SCN7AQ01118 1682 aa13.27□□□□□ -0.29
SMARCAL1-213ENST00000496037 C7orf43Q8WVR3 580 aa13.26□□□□□ -0.29
SMARCAL1-213ENST00000496037 SETDB2Q96T68 719 aa13.26□□□□□ -0.29
SMARCAL1-213ENST00000496037 ZNF408Q9H9D4 720 aa13.26□□□□□ -0.29
SMARCAL1-213ENST00000496037 SAGE1Q9NXZ1 904 aa13.26□□□□□ -0.29
SMARCAL1-213ENST00000496037 EPS15P42566 896 aa13.25□□□□□ -0.29
SMARCAL1-213ENST00000496037 SCNN1DP51172 638 aa13.25□□□□□ -0.29
SMARCAL1-213ENST00000496037 AKAP4Q5JQC9 854 aa13.25□□□□□ -0.29
SMARCAL1-213ENST00000496037 CTU1Q7Z7A3 348 aaKnown RBP13.25□□□□□ -0.29
SMARCAL1-213ENST00000496037 ZNF330Q9Y3S2 320 aaPredicted RBP13.25□□□□□ -0.29
SMARCAL1-213ENST00000496037 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
SMARCAL1-213ENST00000496037 NPR1P16066 1061 aa13.24□□□□□ -0.29
SMARCAL1-213ENST00000496037 EIF5P55010 431 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-213ENST00000496037 SYNE4Q8N205 404 aa13.24□□□□□ -0.29
SMARCAL1-213ENST00000496037 POLKQ9UBT6 870 aa13.24□□□□□ -0.29
SMARCAL1-213ENST00000496037 STARD3NLO95772 234 aa13.23□□□□□ -0.29
SMARCAL1-213ENST00000496037 NPM2Q86SE8 214 aaKnown RBP13.23□□□□□ -0.29
SMARCAL1-213ENST00000496037 SLC52A2Q9HAB3 445 aa13.23□□□□□ -0.29
SMARCAL1-213ENST00000496037 HPS5Q9UPZ3 1129 aa13.23□□□□□ -0.29
SMARCAL1-213ENST00000496037 CHRM1P11229 460 aaPredicted RBP13.22□□□□□ -0.29
SMARCAL1-213ENST00000496037 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
SMARCAL1-213ENST00000496037 OLFM4Q6UX06 510 aa13.22□□□□□ -0.29
SMARCAL1-213ENST00000496037 ZIC5Q96T25 663 aa13.22□□□□□ -0.29
SMARCAL1-213ENST00000496037 TBC1D2BQ9UPU7 963 aa13.22□□□□□ -0.29
SMARCAL1-213ENST00000496037 FXR1P51114 621 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMARCAL1-213ENST00000496037 HUNKP57058 714 aa13.21□□□□□ -0.29
SMARCAL1-213ENST00000496037 GLIS2Q9BZE0 524 aaPredicted RBP13.21□□□□□ -0.29
SMARCAL1-213ENST00000496037 ADARB2Q9NS39 739 aaKnown RBP13.21□□□□□ -0.29
SMARCAL1-213ENST00000496037 MKI67P46013 3256 aaKnown RBP13.21□□□□□ -0.3
SMARCAL1-213ENST00000496037 SCN11AQ9UI33 1791 aa13.2□□□□□ -0.3
SMARCAL1-213ENST00000496037 TRPA1O75762 1119 aa13.2□□□□□ -0.3
SMARCAL1-213ENST00000496037 NBPF5PQ86XG9 351 aaPredicted RBP13.2□□□□□ -0.3
SMARCAL1-213ENST00000496037 IFNL1Q8IU54 200 aa13.2□□□□□ -0.3
SMARCAL1-213ENST00000496037 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
SMARCAL1-213ENST00000496037 PSMD1Q99460 953 aa13.2□□□□□ -0.3
SMARCAL1-213ENST00000496037 MRC1P22897 1456 aa13.19□□□□□ -0.3
SMARCAL1-213ENST00000496037 DLL1O00548 723 aa13.19□□□□□ -0.3
SMARCAL1-213ENST00000496037 PKN2Q16513 984 aaKnown RBP13.19□□□□□ -0.3
SMARCAL1-213ENST00000496037 CDCA8Q53HL2 280 aa13.19□□□□□ -0.3
SMARCAL1-213ENST00000496037 RNF186Q9NXI6 227 aa13.19□□□□□ -0.3
SMARCAL1-213ENST00000496037 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
SMARCAL1-213ENST00000496037 TNNT2P45379 298 aaPredicted RBP13.18□□□□□ -0.3
SMARCAL1-213ENST00000496037 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
SMARCAL1-213ENST00000496037 LARGE2Q8N3Y3 721 aa13.18□□□□□ -0.3
SMARCAL1-213ENST00000496037 CARD14Q9BXL6 1004 aa13.18□□□□□ -0.3
SMARCAL1-213ENST00000496037 IL6STP40189 918 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-213ENST00000496037 RGMBQ6NW40 437 aa13.17□□□□□ -0.3
SMARCAL1-213ENST00000496037 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
SMARCAL1-213ENST00000496037 TTC5Q8N0Z6 440 aa13.17□□□□□ -0.3
SMARCAL1-213ENST00000496037 GPRC5DQ9NZD1 345 aa13.17□□□□□ -0.3
SMARCAL1-213ENST00000496037 COL4A5P29400 1685 aa13.17□□□□□ -0.3
SMARCAL1-213ENST00000496037 TIE1P35590 1138 aa13.16□□□□□ -0.3
SMARCAL1-213ENST00000496037 KIF23Q02241 960 aaPredicted RBP13.16□□□□□ -0.3
SMARCAL1-213ENST00000496037 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
SMARCAL1-213ENST00000496037 ASTLQ6HA08 431 aaPredicted RBP13.16□□□□□ -0.3
SMARCAL1-213ENST00000496037 NIM1KQ8IY84 436 aa13.16□□□□□ -0.3
SMARCAL1-213ENST00000496037 CCDC102AQ96A19 550 aa13.16□□□□□ -0.3
SMARCAL1-213ENST00000496037 TSHZ2Q9NRE2 1034 aa13.16□□□□□ -0.3
SMARCAL1-213ENST00000496037 HDAC9Q9UKV0 1011 aa13.16□□□□□ -0.3
SMARCAL1-213ENST00000496037 CAMTA2O94983 1202 aa13.15□□□□□ -0.3
SMARCAL1-213ENST00000496037 SULT6B1Q6IMI4 303 aa13.15□□□□□ -0.3
SMARCAL1-213ENST00000496037 ZC3H15Q8WU90 426 aaKnown RBP13.15□□□□□ -0.3
SMARCAL1-213ENST00000496037 LGR6Q9HBX8 967 aa13.15□□□□□ -0.3
SMARCAL1-213ENST00000496037 SNED1Q8TER0 1413 aa13.14□□□□□ -0.31
SMARCAL1-213ENST00000496037 KLRG2A4D1S0 409 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-213ENST00000496037 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-213ENST00000496037 RNMTO43148 476 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-213ENST00000496037 ATMINO43313 823 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-213ENST00000496037 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-213ENST00000496037 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-213ENST00000496037 TRPC6Q9Y210 931 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms