RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 FAM9BQ8IZU0 186 aa17.8■□□□□ 0.44
TFE3-205ENST00000495940 KLRG2A4D1S0 409 aaPredicted RBP17.79■□□□□ 0.44
TFE3-205ENST00000495940 FAM177BA6PVY3 158 aa17.79■□□□□ 0.44
TFE3-205ENST00000495940 MAP2K2P36507 400 aa17.79■□□□□ 0.44
TFE3-205ENST00000495940 SOX10P56693 466 aa17.79■□□□□ 0.44
TFE3-205ENST00000495940 EIF6P56537 245 aaKnown RBP17.78■□□□□ 0.44
TFE3-205ENST00000495940 NPM2Q86SE8 214 aaKnown RBP17.78■□□□□ 0.44
TFE3-205ENST00000495940 JDP2Q8WYK2 163 aa17.78■□□□□ 0.44
TFE3-205ENST00000495940 ABCC12Q96J65 1359 aa17.78■□□□□ 0.44
TFE3-205ENST00000495940 KCNQ3O43525 872 aa17.77■□□□□ 0.44
TFE3-205ENST00000495940 TEFQ10587 303 aa17.77■□□□□ 0.44
TFE3-205ENST00000495940 CIAPIN1Q6FI81 312 aa17.77■□□□□ 0.44
TFE3-205ENST00000495940 SAPCD2Q86UD0 394 aa17.77■□□□□ 0.44
TFE3-205ENST00000495940 TEX13AQ9BXU3 409 aaPredicted RBP17.77■□□□□ 0.44
TFE3-205ENST00000495940 NUDCQ9Y266 331 aa17.77■□□□□ 0.44
TFE3-205ENST00000495940 CA12O43570 354 aa17.76■□□□□ 0.43
TFE3-205ENST00000495940 BRPF1P55201 1214 aaPredicted RBP17.76■□□□□ 0.43
TFE3-205ENST00000495940 IL17REQ8NFR9 667 aa17.76■□□□□ 0.43
TFE3-205ENST00000495940 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
TFE3-205ENST00000495940 FMNL2Q96PY5 1086 aa17.76■□□□□ 0.43
TFE3-205ENST00000495940 PSMD1Q99460 953 aa17.76■□□□□ 0.43
TFE3-205ENST00000495940 PRAMEF22A3QJZ6 481 aa17.75■□□□□ 0.43
TFE3-205ENST00000495940 CELF2O95319 508 aaKnown RBP17.75■□□□□ 0.43
TFE3-205ENST00000495940 CCDC184Q52MB2 194 aa17.75■□□□□ 0.43
TFE3-205ENST00000495940 USP50Q70EL3 339 aaPredicted RBP17.75■□□□□ 0.43
TFE3-205ENST00000495940 ZIC5Q96T25 663 aa17.75■□□□□ 0.43
TFE3-205ENST00000495940 NIP7Q9Y221 180 aaKnown RBP eCLIP17.75■□□□□ 0.43
TFE3-205ENST00000495940 GLIS2Q9BZE0 524 aaPredicted RBP17.74■□□□□ 0.43
TFE3-205ENST00000495940 USP16Q9Y5T5 823 aa17.74■□□□□ 0.43
TFE3-205ENST00000495940 FANCIQ9NVI1 1328 aa17.73■□□□□ 0.43
TFE3-205ENST00000495940 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
TFE3-205ENST00000495940 ZNF408Q9H9D4 720 aa17.73■□□□□ 0.43
TFE3-205ENST00000495940 ZNF652Q9Y2D9 606 aa17.73■□□□□ 0.43
TFE3-205ENST00000495940 RBM19Q9Y4C8 960 aaKnown RBP17.73■□□□□ 0.43
TFE3-205ENST00000495940 LAMB4A4D0S4 1761 aa17.73■□□□□ 0.43
TFE3-205ENST00000495940 NUP98P52948 1817 aa17.72■□□□□ 0.43
TFE3-205ENST00000495940 ALDH1B1P30837 517 aa17.72■□□□□ 0.43
TFE3-205ENST00000495940 LARGE2Q8N3Y3 721 aa17.72■□□□□ 0.43
TFE3-205ENST00000495940 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
TFE3-205ENST00000495940 PRPF38BQ5VTL8 546 aaKnown RBP17.71■□□□□ 0.43
TFE3-205ENST00000495940 TPTE2Q6XPS3 522 aa17.71■□□□□ 0.43
TFE3-205ENST00000495940 ANP32EQ9BTT0 268 aa17.71■□□□□ 0.43
TFE3-205ENST00000495940 CEMIPQ8WUJ3 1361 aa17.7■□□□□ 0.42
TFE3-205ENST00000495940 GNAT3A8MTJ3 354 aa17.7■□□□□ 0.42
TFE3-205ENST00000495940 NUTM1Q86Y26 1132 aa17.7■□□□□ 0.42
TFE3-205ENST00000495940 ADARB2Q9NS39 739 aaKnown RBP17.7■□□□□ 0.42
TFE3-205ENST00000495940 GPRC5DQ9NZD1 345 aa17.7■□□□□ 0.42
TFE3-205ENST00000495940 RIC1Q4ADV7 1423 aa17.7■□□□□ 0.42
TFE3-205ENST00000495940 HLFQ16534 295 aa17.69■□□□□ 0.42
TFE3-205ENST00000495940 CRY2Q49AN0 593 aa17.69■□□□□ 0.42
TFE3-205ENST00000495940 NIM1KQ8IY84 436 aa17.69■□□□□ 0.42
TFE3-205ENST00000495940 HHIPL1Q96JK4 782 aa17.69■□□□□ 0.42
TFE3-205ENST00000495940 AKAP11Q9UKA4 1901 aa17.68■□□□□ 0.42
TFE3-205ENST00000495940 NBPF26B4DH59 902 aa17.68■□□□□ 0.42
TFE3-205ENST00000495940 TCERG1O14776 1098 aaKnown RBP17.68■□□□□ 0.42
TFE3-205ENST00000495940 NBPF10Q6P3W6 841 aaKnown RBP17.68■□□□□ 0.42
TFE3-205ENST00000495940 NBPF15Q8N660 670 aa17.68■□□□□ 0.42
TFE3-205ENST00000495940 BTBD11A6QL63 1104 aa17.67■□□□□ 0.42
TFE3-205ENST00000495940 DIAPH1O60610 1272 aaKnown RBP17.67■□□□□ 0.42
TFE3-205ENST00000495940 GTF2E1P29083 439 aaPredicted RBP17.67■□□□□ 0.42
TFE3-205ENST00000495940 AOC3Q16853 763 aa17.67■□□□□ 0.42
TFE3-205ENST00000495940 AMER1Q5JTC6 1135 aaPredicted RBP17.67■□□□□ 0.42
TFE3-205ENST00000495940 KNSTRNQ9Y448 316 aa17.67■□□□□ 0.42
TFE3-205ENST00000495940 NPC1L1Q9UHC9 1359 aa17.66■□□□□ 0.42
TFE3-205ENST00000495940 PPIP5K2O43314 1243 aa17.66■□□□□ 0.42
TFE3-205ENST00000495940 GMPSP49915 693 aaPredicted RBP17.66■□□□□ 0.42
TFE3-205ENST00000495940 DLK2Q6UY11 383 aa17.66■□□□□ 0.42
TFE3-205ENST00000495940 GAS2L2Q8NHY3 880 aa17.66■□□□□ 0.42
TFE3-205ENST00000495940 TRPM4Q8TD43 1214 aa17.66■□□□□ 0.42
TFE3-205ENST00000495940 PPEF1O14829 653 aaPredicted RBP17.65■□□□□ 0.42
TFE3-205ENST00000495940 NOGQ13253 232 aa17.65■□□□□ 0.42
TFE3-205ENST00000495940 CC2D2BQ6DHV5 1058 aa17.65■□□□□ 0.42
TFE3-205ENST00000495940 RPGRQ92834 1020 aaKnown RBP17.65■□□□□ 0.42
TFE3-205ENST00000495940 LAMB2P55268 1798 aa17.64■□□□□ 0.41
TFE3-205ENST00000495940 SHTN1A0MZ66 631 aa17.64■□□□□ 0.41
TFE3-205ENST00000495940 HIRAP54198 1017 aaPredicted RBP17.64■□□□□ 0.41
TFE3-205ENST00000495940 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
TFE3-205ENST00000495940 HUNKP57058 714 aa17.63■□□□□ 0.41
TFE3-205ENST00000495940 CXCL9Q07325 125 aa17.63■□□□□ 0.41
TFE3-205ENST00000495940 POLR2AP24928 1970 aaKnown RBP17.62■□□□□ 0.41
TFE3-205ENST00000495940 FAM155AB1AL88 458 aaPredicted RBP17.62■□□□□ 0.41
TFE3-205ENST00000495940 PER1O15534 1290 aaPredicted RBP17.62■□□□□ 0.41
TFE3-205ENST00000495940 C3orf67Q6ZVT6 689 aa17.62■□□□□ 0.41
TFE3-205ENST00000495940 PGAP2Q9UHJ9 254 aa17.62■□□□□ 0.41
TFE3-205ENST00000495940 SNRPA1P09661 255 aaKnown RBP17.61■□□□□ 0.41
TFE3-205ENST00000495940 HOXA10P31260 410 aaPredicted RBP17.61■□□□□ 0.41
TFE3-205ENST00000495940 UBN2Q6ZU65 1347 aa17.61■□□□□ 0.41
TFE3-205ENST00000495940 RGL2O15211 777 aa17.6■□□□□ 0.41
TFE3-205ENST00000495940 NYXQ9GZU5 481 aa17.6■□□□□ 0.41
TFE3-205ENST00000495940 DUOX1Q9NRD9 1551 aa17.59■□□□□ 0.41
TFE3-205ENST00000495940 TRPA1O75762 1119 aa17.59■□□□□ 0.41
TFE3-205ENST00000495940 GPTP24298 496 aa17.59■□□□□ 0.41
TFE3-205ENST00000495940 CDC37L1Q7L3B6 337 aa17.59■□□□□ 0.41
TFE3-205ENST00000495940 USP48Q86UV5 1035 aa17.59■□□□□ 0.41
TFE3-205ENST00000495940 NGEFQ8N5V2 710 aa17.59■□□□□ 0.41
TFE3-205ENST00000495940 SAGE1Q9NXZ1 904 aa17.59■□□□□ 0.41
TFE3-205ENST00000495940 ZNRF3Q9ULT6 936 aa17.59■□□□□ 0.41
TFE3-205ENST00000495940 TAF1P21675 1872 aa17.58■□□□□ 0.41
TFE3-205ENST00000495940 IBTKQ9P2D0 1353 aaPredicted RBP17.58■□□□□ 0.4
TFE3-205ENST00000495940 CDHR2Q9BYE9 1310 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms