RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 AKAP11Q9UKA4 1901 aa13.89□□□□□ -0.19
C9orf78-207ENST00000495934 MTHFSDQ2M296 383 aaKnown RBP13.88□□□□□ -0.19
C9orf78-207ENST00000495934 ZNF790Q6PG37 636 aa13.88□□□□□ -0.19
C9orf78-207ENST00000495934 CLEC4GQ6UXB4 293 aa13.88□□□□□ -0.19
C9orf78-207ENST00000495934 TPTE2Q6XPS3 522 aa13.88□□□□□ -0.19
C9orf78-207ENST00000495934 POLR3GLQ9BT43 218 aa13.88□□□□□ -0.19
C9orf78-207ENST00000495934 GPRC5DQ9NZD1 345 aa13.88□□□□□ -0.19
C9orf78-207ENST00000495934 ZNF652Q9Y2D9 606 aa13.88□□□□□ -0.19
C9orf78-207ENST00000495934 KIF7Q2M1P5 1343 aa13.88□□□□□ -0.19
C9orf78-207ENST00000495934 SIPA1L3O60292 1781 aaPredicted RBP13.87□□□□□ -0.19
C9orf78-207ENST00000495934 FAM177BA6PVY3 158 aa13.87□□□□□ -0.19
C9orf78-207ENST00000495934 HMOX1P09601 288 aa13.87□□□□□ -0.19
C9orf78-207ENST00000495934 GCC1Q96CN9 775 aa13.87□□□□□ -0.19
C9orf78-207ENST00000495934 SAGE1Q9NXZ1 904 aa13.87□□□□□ -0.19
C9orf78-207ENST00000495934 PIP4K2AP48426 406 aaPredicted RBP13.86□□□□□ -0.19
C9orf78-207ENST00000495934 CC2D2BQ6DHV5 1058 aa13.86□□□□□ -0.19
C9orf78-207ENST00000495934 MORC1Q86VD1 984 aa13.86□□□□□ -0.19
C9orf78-207ENST00000495934 NIM1KQ8IY84 436 aa13.86□□□□□ -0.19
C9orf78-207ENST00000495934 NBPF15Q8N660 670 aa13.86□□□□□ -0.19
C9orf78-207ENST00000495934 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
C9orf78-207ENST00000495934 MKI67P46013 3256 aaKnown RBP13.85□□□□□ -0.19
C9orf78-207ENST00000495934 HUNKP57058 714 aa13.85□□□□□ -0.19
C9orf78-207ENST00000495934 CTU1Q7Z7A3 348 aaKnown RBP13.85□□□□□ -0.19
C9orf78-207ENST00000495934 NIP7Q9Y221 180 aaKnown RBP eCLIP13.85□□□□□ -0.19
C9orf78-207ENST00000495934 TEFQ10587 303 aa13.84□□□□□ -0.19
C9orf78-207ENST00000495934 PGAP2Q9UHJ9 254 aa13.84□□□□□ -0.19
C9orf78-207ENST00000495934 TRPA1O75762 1119 aa13.83□□□□□ -0.2
C9orf78-207ENST00000495934 GTF2E1P29083 439 aaPredicted RBP13.83□□□□□ -0.2
C9orf78-207ENST00000495934 CRY2Q49AN0 593 aa13.83□□□□□ -0.2
C9orf78-207ENST00000495934 GRIPAP1Q4V328 841 aa13.83□□□□□ -0.2
C9orf78-207ENST00000495934 HABP4Q5JVS0 413 aaKnown RBP13.83□□□□□ -0.2
C9orf78-207ENST00000495934 CDC37L1Q7L3B6 337 aa13.83□□□□□ -0.2
C9orf78-207ENST00000495934 RNF186Q9NXI6 227 aa13.83□□□□□ -0.2
C9orf78-207ENST00000495934 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.2
C9orf78-207ENST00000495934 FAM155AB1AL88 458 aaPredicted RBP13.82□□□□□ -0.2
C9orf78-207ENST00000495934 PPIP5K2O43314 1243 aa13.82□□□□□ -0.2
C9orf78-207ENST00000495934 GMPSP49915 693 aaPredicted RBP13.82□□□□□ -0.2
C9orf78-207ENST00000495934 SLC51AQ86UW1 340 aa13.82□□□□□ -0.2
C9orf78-207ENST00000495934 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
C9orf78-207ENST00000495934 PANK3Q9H999 370 aa13.82□□□□□ -0.2
C9orf78-207ENST00000495934 HPS5Q9UPZ3 1129 aa13.82□□□□□ -0.2
C9orf78-207ENST00000495934 ABCC12Q96J65 1359 aa13.82□□□□□ -0.2
C9orf78-207ENST00000495934 KIF23Q02241 960 aaPredicted RBP13.81□□□□□ -0.2
C9orf78-207ENST00000495934 AOC3Q16853 763 aa13.81□□□□□ -0.2
C9orf78-207ENST00000495934 RGMBQ6NW40 437 aa13.81□□□□□ -0.2
C9orf78-207ENST00000495934 RPGRQ92834 1020 aaKnown RBP13.81□□□□□ -0.2
C9orf78-207ENST00000495934 USP16Q9Y5T5 823 aa13.81□□□□□ -0.2
C9orf78-207ENST00000495934 POLR2AP24928 1970 aaKnown RBP13.81□□□□□ -0.2
C9orf78-207ENST00000495934 RGL2O15211 777 aa13.8□□□□□ -0.2
C9orf78-207ENST00000495934 HIRAP54198 1017 aaPredicted RBP13.8□□□□□ -0.2
C9orf78-207ENST00000495934 CXCL9Q07325 125 aa13.8□□□□□ -0.2
C9orf78-207ENST00000495934 IL17REQ8NFR9 667 aa13.8□□□□□ -0.2
C9orf78-207ENST00000495934 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
C9orf78-207ENST00000495934 TCERG1O14776 1098 aaKnown RBP13.79□□□□□ -0.2
C9orf78-207ENST00000495934 PPEF1O14829 653 aaPredicted RBP13.79□□□□□ -0.2
C9orf78-207ENST00000495934 KCNQ3O43525 872 aa13.79□□□□□ -0.2
C9orf78-207ENST00000495934 USP48Q86UV5 1035 aa13.79□□□□□ -0.2
C9orf78-207ENST00000495934 CCDC102AQ96A19 550 aa13.79□□□□□ -0.2
C9orf78-207ENST00000495934 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
C9orf78-207ENST00000495934 CDHR2Q9BYE9 1310 aa13.79□□□□□ -0.2
C9orf78-207ENST00000495934 RIC1Q4ADV7 1423 aa13.79□□□□□ -0.2
C9orf78-207ENST00000495934 PRAMEF22A3QJZ6 481 aa13.78□□□□□ -0.2
C9orf78-207ENST00000495934 GNAT3A8MTJ3 354 aa13.78□□□□□ -0.2
C9orf78-207ENST00000495934 PER1O15534 1290 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-207ENST00000495934 HOXA10P31260 410 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-207ENST00000495934 ZNF157P51786 506 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-207ENST00000495934 DLK2Q6UY11 383 aa13.78□□□□□ -0.2
C9orf78-207ENST00000495934 NUTM1Q86Y26 1132 aa13.78□□□□□ -0.2
C9orf78-207ENST00000495934 BCL2L13Q9BXK5 485 aa13.78□□□□□ -0.2
C9orf78-207ENST00000495934 NYXQ9GZU5 481 aa13.78□□□□□ -0.2
C9orf78-207ENST00000495934 GBA2Q9HCG7 927 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-207ENST00000495934 HLFQ16534 295 aa13.77□□□□□ -0.21
C9orf78-207ENST00000495934 C2orf69Q8N8R5 385 aa13.77□□□□□ -0.21
C9orf78-207ENST00000495934 NUP98P52948 1817 aa13.76□□□□□ -0.21
C9orf78-207ENST00000495934 SHTN1A0MZ66 631 aa13.76□□□□□ -0.21
C9orf78-207ENST00000495934 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
C9orf78-207ENST00000495934 PKN2Q16513 984 aaKnown RBP13.76□□□□□ -0.21
C9orf78-207ENST00000495934 RBM17Q96I25 401 aaKnown RBP13.76□□□□□ -0.21
C9orf78-207ENST00000495934 CSRNP1Q96S65 589 aa13.76□□□□□ -0.21
C9orf78-207ENST00000495934 VPS33BQ9H267 617 aa13.76□□□□□ -0.21
C9orf78-207ENST00000495934 CEMIPQ8WUJ3 1361 aa13.75□□□□□ -0.21
C9orf78-207ENST00000495934 NBPF26B4DH59 902 aa13.75□□□□□ -0.21
C9orf78-207ENST00000495934 RAD17O75943 681 aa13.75□□□□□ -0.21
C9orf78-207ENST00000495934 SLC10A3P09131 477 aa13.75□□□□□ -0.21
C9orf78-207ENST00000495934 TNIP1Q15025 636 aa13.75□□□□□ -0.21
C9orf78-207ENST00000495934 NBPF10Q6P3W6 841 aaKnown RBP13.75□□□□□ -0.21
C9orf78-207ENST00000495934 KRT26Q7Z3Y9 468 aa13.75□□□□□ -0.21
C9orf78-207ENST00000495934 GAS2L2Q8NHY3 880 aa13.75□□□□□ -0.21
C9orf78-207ENST00000495934 CRAMP1Q96RY5 1269 aa13.75□□□□□ -0.21
C9orf78-207ENST00000495934 CNOT7Q9UIV1 285 aaKnown RBP13.75□□□□□ -0.21
C9orf78-207ENST00000495934 HTTP42858 3142 aa13.75□□□□□ -0.21
C9orf78-207ENST00000495934 H7C1D1 291 aa13.74□□□□□ -0.21
C9orf78-207ENST00000495934 DIAPH1O60610 1272 aaKnown RBP13.74□□□□□ -0.21
C9orf78-207ENST00000495934 SNRPA1P09661 255 aaKnown RBP13.74□□□□□ -0.21
C9orf78-207ENST00000495934 MICALL2Q8IY33 904 aa13.74□□□□□ -0.21
C9orf78-207ENST00000495934 SUPT20HQ8NEM7 779 aa13.74□□□□□ -0.21
C9orf78-207ENST00000495934 TMX4Q9H1E5 349 aaPredicted RBP13.74□□□□□ -0.21
C9orf78-207ENST00000495934 HDAC9Q9UKV0 1011 aa13.74□□□□□ -0.21
C9orf78-207ENST00000495934 FXR1P51114 621 aaKnown RBP eCLIP13.73□□□□□ -0.21
C9orf78-207ENST00000495934 AMER1Q5JTC6 1135 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms