RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 TM4SF1P30408 202 aa24.59■■□□□ 1.53
ATG3-208ENST00000495756 IRX6P78412 446 aaPredicted RBP24.58■■□□□ 1.53
ATG3-208ENST00000495756 MSL1Q68DK7 614 aa24.58■■□□□ 1.53
ATG3-208ENST00000495756 COL24A1Q17RW2 1714 aa24.58■■□□□ 1.53
ATG3-208ENST00000495756 CRBNQ96SW2 442 aa24.58■■□□□ 1.52
ATG3-208ENST00000495756 DDX19BQ9UMR2 479 aa24.58■■□□□ 1.52
ATG3-208ENST00000495756 CARMIL3Q8ND23 1372 aa24.57■■□□□ 1.52
ATG3-208ENST00000495756 SUSD4Q5VX71 490 aa24.57■■□□□ 1.52
ATG3-208ENST00000495756 USP44Q9H0E7 712 aa24.57■■□□□ 1.52
ATG3-208ENST00000495756 C9orf78Q9NZ63 289 aaPredicted RBP24.56■■□□□ 1.52
ATG3-208ENST00000495756 GRM8O00222 908 aa24.55■■□□□ 1.52
ATG3-208ENST00000495756 ZBTB7BO15156 539 aaPredicted RBP24.55■■□□□ 1.52
ATG3-208ENST00000495756 DDR1Q08345 913 aa24.55■■□□□ 1.52
ATG3-208ENST00000495756 PPP1R42Q7Z4L9 355 aa24.55■■□□□ 1.52
ATG3-208ENST00000495756 UTP14AQ9BVJ6 771 aaKnown RBP24.55■■□□□ 1.52
ATG3-208ENST00000495756 FAM177BA6PVY3 158 aa24.54■■□□□ 1.52
ATG3-208ENST00000495756 MMP10P09238 476 aa24.54■■□□□ 1.52
ATG3-208ENST00000495756 MEIS3Q99687 375 aa24.54■■□□□ 1.52
ATG3-208ENST00000495756 TRMT112Q9UI30 125 aaKnown RBP24.54■■□□□ 1.52
ATG3-208ENST00000495756 H7C1W4 665 aa24.53■■□□□ 1.52
ATG3-208ENST00000495756 ZBTB7AO95365 584 aa24.53■■□□□ 1.52
ATG3-208ENST00000495756 NTSR2O95665 410 aa24.53■■□□□ 1.52
ATG3-208ENST00000495756 NBPF7P0C2Y1 421 aaPredicted RBP24.53■■□□□ 1.52
ATG3-208ENST00000495756 NBPF5PQ86XG9 351 aaPredicted RBP24.53■■□□□ 1.52
ATG3-208ENST00000495756 ZBTB38Q8NAP3 1195 aaPredicted RBP24.53■■□□□ 1.52
ATG3-208ENST00000495756 UTYO14607 1347 aa24.53■■□□□ 1.52
ATG3-208ENST00000495756 POLRMTO00411 1230 aaKnown RBP24.52■■□□□ 1.52
ATG3-208ENST00000495756 PCCAP05165 728 aaPredicted RBP24.52■■□□□ 1.52
ATG3-208ENST00000495756 NEFLP07196 543 aa24.52■■□□□ 1.52
ATG3-208ENST00000495756 UBE3BQ7Z3V4 1068 aa24.52■■□□□ 1.52
ATG3-208ENST00000495756 NYXQ9GZU5 481 aa24.52■■□□□ 1.52
ATG3-208ENST00000495756 MTFR1LQ9H019 292 aa24.52■■□□□ 1.52
ATG3-208ENST00000495756 JARID2Q92833 1246 aaPredicted RBP24.51■■□□□ 1.51
ATG3-208ENST00000495756 FAM89AQ96GI7 184 aa24.51■■□□□ 1.51
ATG3-208ENST00000495756 CHMP4BQ9H444 224 aaKnown RBP24.51■■□□□ 1.51
ATG3-208ENST00000495756 SERPINB2P05120 415 aa24.51■■□□□ 1.51
ATG3-208ENST00000495756 GNAI3P08754 354 aa24.51■■□□□ 1.51
ATG3-208ENST00000495756 CASP7P55210 303 aa24.51■■□□□ 1.51
ATG3-208ENST00000495756 RTL5Q5HYW3 569 aaPredicted RBP24.51■■□□□ 1.51
ATG3-208ENST00000495756 TPTE2Q6XPS3 522 aa24.51■■□□□ 1.51
ATG3-208ENST00000495756 EXOC6Q8TAG9 804 aa24.51■■□□□ 1.51
ATG3-208ENST00000495756 SH3TC1Q8TE82 1336 aa24.5■■□□□ 1.51
ATG3-208ENST00000495756 ZBTB40Q9NUA8 1239 aa24.5■■□□□ 1.51
ATG3-208ENST00000495756 PARP3Q9Y6F1 533 aa24.5■■□□□ 1.51
ATG3-208ENST00000495756 UBTFL1P0CB47 393 aaPredicted RBP24.49■■□□□ 1.51
ATG3-208ENST00000495756 NUTM1Q86Y26 1132 aa24.49■■□□□ 1.51
ATG3-208ENST00000495756 SYNE4Q8N205 404 aa24.49■■□□□ 1.51
ATG3-208ENST00000495756 CNBD1Q8NA66 436 aa24.48■■□□□ 1.51
ATG3-208ENST00000495756 ATF5Q9Y2D1 282 aaPredicted RBP24.48■■□□□ 1.51
ATG3-208ENST00000495756 CDHR2Q9BYE9 1310 aa24.48■■□□□ 1.51
ATG3-208ENST00000495756 GTF2E1P29083 439 aaPredicted RBP24.47■■□□□ 1.51
ATG3-208ENST00000495756 ERFEQ4G0M1 354 aa24.47■■□□□ 1.51
ATG3-208ENST00000495756 PRR5LQ6MZQ0 368 aa24.47■■□□□ 1.51
ATG3-208ENST00000495756 NRXN2Q9P2S2 1712 aa24.47■■□□□ 1.51
ATG3-208ENST00000495756 IRS4O14654 1257 aaPredicted RBP24.45■■□□□ 1.51
ATG3-208ENST00000495756 NPHP1O15259 732 aa24.45■■□□□ 1.51
ATG3-208ENST00000495756 GNAI2P04899 355 aa24.45■■□□□ 1.51
ATG3-208ENST00000495756 HDAC5Q9UQL6 1122 aa24.45■■□□□ 1.51
ATG3-208ENST00000495756 ABCC12Q96J65 1359 aa24.45■■□□□ 1.5
ATG3-208ENST00000495756 SLC10A5Q5PT55 438 aa24.45■■□□□ 1.5
ATG3-208ENST00000495756 KAZALD1Q96I82 304 aa24.45■■□□□ 1.5
ATG3-208ENST00000495756 SUCLG2Q96I99 432 aa24.45■■□□□ 1.5
ATG3-208ENST00000495756 LRRFIP2Q9Y608 721 aaKnown RBP24.45■■□□□ 1.5
ATG3-208ENST00000495756 AAMPQ13685 434 aa24.44■■□□□ 1.5
ATG3-208ENST00000495756 CCDC24Q8N4L8 307 aa24.44■■□□□ 1.5
ATG3-208ENST00000495756 C1orf115Q9H7X2 142 aa24.44■■□□□ 1.5
ATG3-208ENST00000495756 DDX60Q8IY21 1712 aaKnown RBP24.43■■□□□ 1.5
ATG3-208ENST00000495756 HCLS1P14317 486 aaPredicted RBP24.43■■□□□ 1.5
ATG3-208ENST00000495756 HSP90B1P14625 803 aaKnown RBP24.43■■□□□ 1.5
ATG3-208ENST00000495756 POLD1P28340 1107 aa24.43■■□□□ 1.5
ATG3-208ENST00000495756 ST5P78524 1137 aa24.43■■□□□ 1.5
ATG3-208ENST00000495756 PLA2G12BQ9BX93 195 aa24.43■■□□□ 1.5
ATG3-208ENST00000495756 LAMB2P55268 1798 aa24.43■■□□□ 1.5
ATG3-208ENST00000495756 SGIP1Q9BQI5 828 aa24.42■■□□□ 1.5
ATG3-208ENST00000495756 EPHA10Q5JZY3 1008 aa24.41■■□□□ 1.5
ATG3-208ENST00000495756 PDE8AO60658 829 aa24.4■■□□□ 1.5
ATG3-208ENST00000495756 FOXO4P98177 505 aa24.4■■□□□ 1.5
ATG3-208ENST00000495756 BICC1Q9H694 974 aaKnown RBP24.4■■□□□ 1.5
ATG3-208ENST00000495756 RIC1Q4ADV7 1423 aa24.4■■□□□ 1.5
ATG3-208ENST00000495756 PTGER2P43116 358 aa24.39■■□□□ 1.5
ATG3-208ENST00000495756 SPON1Q9HCB6 807 aa24.39■■□□□ 1.5
ATG3-208ENST00000495756 ANKRD44Q8N8A2 993 aa24.38■■□□□ 1.49
ATG3-208ENST00000495756 MYH3P11055 1940 aa24.38■■□□□ 1.49
ATG3-208ENST00000495756 TNRC6CQ9HCJ0 1690 aaKnown RBP24.38■■□□□ 1.49
ATG3-208ENST00000495756 CTSWP56202 376 aa24.38■■□□□ 1.49
ATG3-208ENST00000495756 RABL6Q3YEC7 729 aaPredicted RBP24.38■■□□□ 1.49
ATG3-208ENST00000495756 NLRP3Q96P20 1036 aa24.38■■□□□ 1.49
ATG3-208ENST00000495756 BRIP1Q9BX63 1249 aa24.38■■□□□ 1.49
ATG3-208ENST00000495756 ANKRD31Q8N7Z5 1873 aa24.37■■□□□ 1.49
ATG3-208ENST00000495756 C3orf67Q6ZVT6 689 aa24.37■■□□□ 1.49
ATG3-208ENST00000495756 CSF1RP07333 972 aa24.36■■□□□ 1.49
ATG3-208ENST00000495756 LMBR1LQ6UX01 489 aa24.36■■□□□ 1.49
ATG3-208ENST00000495756 TTLL11Q8NHH1 800 aa24.36■■□□□ 1.49
ATG3-208ENST00000495756 C10orf71Q711Q0 1435 aa24.35■■□□□ 1.49
ATG3-208ENST00000495756 CEP85Q6P2H3 762 aa24.35■■□□□ 1.49
ATG3-208ENST00000495756 PCDHB15Q9Y5E8 787 aa24.35■■□□□ 1.49
ATG3-208ENST00000495756 MTX1Q13505 466 aa24.34■■□□□ 1.49
ATG3-208ENST00000495756 SF3B3Q15393 1217 aaKnown RBP24.34■■□□□ 1.49
ATG3-208ENST00000495756 ERICH6BQ5W0A0 696 aa24.34■■□□□ 1.49
ATG3-208ENST00000495756 RPAP2Q8IXW5 612 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms