RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 FER1L6Q2WGJ9 1857 aa20.28■□□□□ 0.84
CBX4-204ENST00000495122 STARD3NLO95772 234 aa20.28■□□□□ 0.84
CBX4-204ENST00000495122 GNAI3P08754 354 aa20.28■□□□□ 0.84
CBX4-204ENST00000495122 EIF5P55010 431 aaKnown RBP20.28■□□□□ 0.84
CBX4-204ENST00000495122 SKAP1Q86WV1 359 aa20.28■□□□□ 0.84
CBX4-204ENST00000495122 TNRC6CQ9HCJ0 1690 aaKnown RBP20.27■□□□□ 0.84
CBX4-204ENST00000495122 IBTKQ9P2D0 1353 aaPredicted RBP20.27■□□□□ 0.84
CBX4-204ENST00000495122 HMMRO75330 724 aa20.27■□□□□ 0.84
CBX4-204ENST00000495122 NFIXQ14938 502 aa20.27■□□□□ 0.84
CBX4-204ENST00000495122 CHD1LQ86WJ1 897 aa20.27■□□□□ 0.84
CBX4-204ENST00000495122 FMNL2Q96PY5 1086 aa20.27■□□□□ 0.84
CBX4-204ENST00000495122 KCNQ3O43525 872 aa20.26■□□□□ 0.83
CBX4-204ENST00000495122 FKBP5Q13451 457 aaPredicted RBP20.26■□□□□ 0.83
CBX4-204ENST00000495122 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
CBX4-204ENST00000495122 EIF5BO60841 1220 aaKnown RBP20.25■□□□□ 0.83
CBX4-204ENST00000495122 G2E3Q7L622 706 aa20.25■□□□□ 0.83
CBX4-204ENST00000495122 DCTPP1Q9H773 170 aa20.25■□□□□ 0.83
CBX4-204ENST00000495122 DBF4Q9UBU7 674 aaPredicted RBP20.24■□□□□ 0.83
CBX4-204ENST00000495122 CARMIL3Q8ND23 1372 aa20.23■□□□□ 0.83
CBX4-204ENST00000495122 A0A087WZG4 1122 aa20.23■□□□□ 0.83
CBX4-204ENST00000495122 SIRT2Q8IXJ6 389 aa20.23■□□□□ 0.83
CBX4-204ENST00000495122 GPBP1L1Q9HC44 474 aaPredicted RBP20.23■□□□□ 0.83
CBX4-204ENST00000495122 PIM2Q9P1W9 311 aa20.23■□□□□ 0.83
CBX4-204ENST00000495122 GNAI2P04899 355 aa20.22■□□□□ 0.83
CBX4-204ENST00000495122 CHRNA5P30532 468 aa20.22■□□□□ 0.83
CBX4-204ENST00000495122 IL6STP40189 918 aaPredicted RBP20.22■□□□□ 0.83
CBX4-204ENST00000495122 CEP85Q6P2H3 762 aa20.22■□□□□ 0.83
CBX4-204ENST00000495122 CEP350Q5VT06 3117 aa20.22■□□□□ 0.83
CBX4-204ENST00000495122 SLX4Q8IY92 1834 aa20.21■□□□□ 0.83
CBX4-204ENST00000495122 SERPINB2P05120 415 aa20.21■□□□□ 0.83
CBX4-204ENST00000495122 ZNF526Q8TF50 670 aaPredicted RBP20.21■□□□□ 0.83
CBX4-204ENST00000495122 UPF2Q9HAU5 1272 aaKnown RBP20.21■□□□□ 0.83
CBX4-204ENST00000495122 HDAC5Q9UQL6 1122 aa20.21■□□□□ 0.83
CBX4-204ENST00000495122 A1BGP04217 495 aa20.2■□□□□ 0.82
CBX4-204ENST00000495122 DALRD3Q5D0E6 543 aaKnown RBP20.2■□□□□ 0.82
CBX4-204ENST00000495122 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
CBX4-204ENST00000495122 HYPKQ9NX55 129 aa20.2■□□□□ 0.82
CBX4-204ENST00000495122 ZBTB47Q9UFB7 747 aaPredicted RBP20.2■□□□□ 0.82
CBX4-204ENST00000495122 ANKRD36CQ5JPF3 1778 aa20.19■□□□□ 0.82
CBX4-204ENST00000495122 BMP2KLQ5H9B9 411 aa20.19■□□□□ 0.82
CBX4-204ENST00000495122 SLC4A10Q6U841 1118 aa20.19■□□□□ 0.82
CBX4-204ENST00000495122 ERICH6Q7L0X2 663 aa20.19■□□□□ 0.82
CBX4-204ENST00000495122 MEIS3Q99687 375 aa20.19■□□□□ 0.82
CBX4-204ENST00000495122 C1orf115Q9H7X2 142 aa20.19■□□□□ 0.82
CBX4-204ENST00000495122 NOP58Q9Y2X3 529 aaKnown RBP20.19■□□□□ 0.82
CBX4-204ENST00000495122 PRAMEF22A3QJZ6 481 aa20.18■□□□□ 0.82
CBX4-204ENST00000495122 TBC1D9BQ66K14 1250 aa20.18■□□□□ 0.82
CBX4-204ENST00000495122 TBC1D2BQ9UPU7 963 aa20.18■□□□□ 0.82
CBX4-204ENST00000495122 ZNF330Q9Y3S2 320 aaPredicted RBP20.18■□□□□ 0.82
CBX4-204ENST00000495122 USP16Q9Y5T5 823 aa20.18■□□□□ 0.82
CBX4-204ENST00000495122 F6X3S4 739 aa20.17■□□□□ 0.82
CBX4-204ENST00000495122 ANKRD45Q5TZF3 282 aa20.17■□□□□ 0.82
CBX4-204ENST00000495122 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
CBX4-204ENST00000495122 CAMTA2O94983 1202 aa20.16■□□□□ 0.82
CBX4-204ENST00000495122 SNRPA1P09661 255 aaKnown RBP20.16■□□□□ 0.82
CBX4-204ENST00000495122 BICDL1Q6ZP65 573 aa20.16■□□□□ 0.82
CBX4-204ENST00000495122 DNAAF4Q8WXU2 420 aa20.16■□□□□ 0.82
CBX4-204ENST00000495122 CHPF2Q9P2E5 772 aa20.16■□□□□ 0.82
CBX4-204ENST00000495122 ALDH1L1O75891 902 aa20.15■□□□□ 0.82
CBX4-204ENST00000495122 DDX58O95786 925 aaKnown RBP20.15■□□□□ 0.82
CBX4-204ENST00000495122 EIF2S2P20042 333 aaKnown RBP20.15■□□□□ 0.82
CBX4-204ENST00000495122 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
CBX4-204ENST00000495122 DDX21Q9NR30 783 aaKnown RBP eCLIP20.15■□□□□ 0.82
CBX4-204ENST00000495122 ERBB4Q15303 1308 aa20.15■□□□□ 0.82
CBX4-204ENST00000495122 KIF3CO14782 793 aa20.14■□□□□ 0.81
CBX4-204ENST00000495122 PIP4K2AP48426 406 aaPredicted RBP20.14■□□□□ 0.81
CBX4-204ENST00000495122 NPM2Q86SE8 214 aaKnown RBP20.14■□□□□ 0.81
CBX4-204ENST00000495122 DZIP3Q86Y13 1208 aaKnown RBP20.14■□□□□ 0.81
CBX4-204ENST00000495122 WDR90Q96KV7 1748 aa20.13■□□□□ 0.81
CBX4-204ENST00000495122 C9orf131Q5VYM1 1079 aa20.13■□□□□ 0.81
CBX4-204ENST00000495122 UBTFL1P0CB47 393 aaPredicted RBP20.12■□□□□ 0.81
CBX4-204ENST00000495122 ATP8B2P98198 1209 aa20.12■□□□□ 0.81
CBX4-204ENST00000495122 PRR5LQ6MZQ0 368 aa20.12■□□□□ 0.81
CBX4-204ENST00000495122 KSR2Q6VAB6 950 aa20.12■□□□□ 0.81
CBX4-204ENST00000495122 C2CD5Q86YS7 1000 aa20.12■□□□□ 0.81
CBX4-204ENST00000495122 NECTIN2Q92692 538 aa20.12■□□□□ 0.81
CBX4-204ENST00000495122 PHAXQ9H814 394 aaKnown RBP20.12■□□□□ 0.81
CBX4-204ENST00000495122 LAMB2P55268 1798 aa20.11■□□□□ 0.81
CBX4-204ENST00000495122 NBPF26B4DH59 902 aa20.11■□□□□ 0.81
CBX4-204ENST00000495122 BEND3Q5T5X7 828 aa20.11■□□□□ 0.81
CBX4-204ENST00000495122 NBPF10Q6P3W6 841 aaKnown RBP20.11■□□□□ 0.81
CBX4-204ENST00000495122 NBPF15Q8N660 670 aa20.11■□□□□ 0.81
CBX4-204ENST00000495122 H0YIN7 160 aa20.1■□□□□ 0.81
CBX4-204ENST00000495122 USP44Q9H0E7 712 aa20.1■□□□□ 0.81
CBX4-204ENST00000495122 RASSF7Q02833 373 aa20.09■□□□□ 0.81
CBX4-204ENST00000495122 TTLL6Q8N841 843 aa20.09■□□□□ 0.81
CBX4-204ENST00000495122 SETDB2Q96T68 719 aa20.09■□□□□ 0.81
CBX4-204ENST00000495122 BRIP1Q9BX63 1249 aa20.09■□□□□ 0.81
CBX4-204ENST00000495122 RNF181Q9P0P0 153 aa20.09■□□□□ 0.81
CBX4-204ENST00000495122 PI4KAP2A4QPH2 592 aa20.08■□□□□ 0.81
CBX4-204ENST00000495122 PI4KAP1Q8N8J0 262 aa20.08■□□□□ 0.81
CBX4-204ENST00000495122 CNBD1Q8NA66 436 aa20.08■□□□□ 0.81
CBX4-204ENST00000495122 RGL2O15211 777 aa20.07■□□□□ 0.8
CBX4-204ENST00000495122 PDE6BP35913 854 aa20.07■□□□□ 0.8
CBX4-204ENST00000495122 CLEC4GQ6UXB4 293 aa20.07■□□□□ 0.8
CBX4-204ENST00000495122 CCDC24Q8N4L8 307 aa20.07■□□□□ 0.8
CBX4-204ENST00000495122 SSH3Q8TE77 659 aa20.07■□□□□ 0.8
CBX4-204ENST00000495122 TBC1D32Q96NH3 1257 aa20.07■□□□□ 0.8
CBX4-204ENST00000495122 ANP32EQ9BTT0 268 aa20.07■□□□□ 0.8
CBX4-204ENST00000495122 RAB11FIP3O75154 756 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms