RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 GYS1P13807 737 aa17■□□□□ 0.31
APTX-231ENST00000494973 IRX6P78412 446 aaPredicted RBP17■□□□□ 0.31
APTX-231ENST00000494973 CWF19L2Q2TBE0 894 aaKnown RBP17■□□□□ 0.31
APTX-231ENST00000494973 NLRP10Q86W26 655 aa17■□□□□ 0.31
APTX-231ENST00000494973 AMIGO3Q86WK7 504 aa17■□□□□ 0.31
APTX-231ENST00000494973 COL23A1Q86Y22 540 aaPredicted RBP17■□□□□ 0.31
APTX-231ENST00000494973 SRP68Q9UHB9 627 aaKnown RBP17■□□□□ 0.31
APTX-231ENST00000494973 GNAI2P04899 355 aa16.99■□□□□ 0.31
APTX-231ENST00000494973 PCCAP05165 728 aaPredicted RBP16.99■□□□□ 0.31
APTX-231ENST00000494973 ZBTB38Q8NAP3 1195 aaPredicted RBP16.99■□□□□ 0.31
APTX-231ENST00000494973 EXOC6Q8TAG9 804 aa16.99■□□□□ 0.31
APTX-231ENST00000494973 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
APTX-231ENST00000494973 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
APTX-231ENST00000494973 CDHR2Q9BYE9 1310 aa16.98■□□□□ 0.31
APTX-231ENST00000494973 GPTP24298 496 aa16.98■□□□□ 0.31
APTX-231ENST00000494973 USP44Q9H0E7 712 aa16.98■□□□□ 0.31
APTX-231ENST00000494973 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
APTX-231ENST00000494973 SH3TC1Q8TE82 1336 aa16.97■□□□□ 0.31
APTX-231ENST00000494973 TPTE2Q6XPS3 522 aa16.97■□□□□ 0.31
APTX-231ENST00000494973 MEIS3Q99687 375 aa16.97■□□□□ 0.31
APTX-231ENST00000494973 UBN2Q6ZU65 1347 aa16.96■□□□□ 0.31
APTX-231ENST00000494973 H7C1W4 665 aa16.96■□□□□ 0.31
APTX-231ENST00000494973 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
APTX-231ENST00000494973 NBPF5PQ86XG9 351 aaPredicted RBP16.96■□□□□ 0.31
APTX-231ENST00000494973 TRMT112Q9UI30 125 aaKnown RBP16.96■□□□□ 0.31
APTX-231ENST00000494973 LAMB2P55268 1798 aa16.95■□□□□ 0.3
APTX-231ENST00000494973 NPHP1O15259 732 aa16.95■□□□□ 0.3
APTX-231ENST00000494973 HMMRO75330 724 aa16.95■□□□□ 0.3
APTX-231ENST00000494973 GTF2E1P29083 439 aaPredicted RBP16.95■□□□□ 0.3
APTX-231ENST00000494973 UBE3BQ7Z3V4 1068 aa16.95■□□□□ 0.3
APTX-231ENST00000494973 RPAP2Q8IXW5 612 aaPredicted RBP16.95■□□□□ 0.3
APTX-231ENST00000494973 RIC1Q4ADV7 1423 aa16.95■□□□□ 0.3
APTX-231ENST00000494973 NTSR2O95665 410 aa16.94■□□□□ 0.3
APTX-231ENST00000494973 NBPF7P0C2Y1 421 aaPredicted RBP16.94■□□□□ 0.3
APTX-231ENST00000494973 NFIXQ14938 502 aa16.94■□□□□ 0.3
APTX-231ENST00000494973 SUSD4Q5VX71 490 aa16.94■□□□□ 0.3
APTX-231ENST00000494973 BICDL1Q6ZP65 573 aa16.94■□□□□ 0.3
APTX-231ENST00000494973 SMIM5Q71RC9 77 aa16.94■□□□□ 0.3
APTX-231ENST00000494973 PLA2G12BQ9BX93 195 aa16.94■□□□□ 0.3
APTX-231ENST00000494973 PPP4R2Q9NY27 417 aa16.94■□□□□ 0.3
APTX-231ENST00000494973 TM4SF1P30408 202 aa16.93■□□□□ 0.3
APTX-231ENST00000494973 ST5P78524 1137 aa16.93■□□□□ 0.3
APTX-231ENST00000494973 CNBD1Q8NA66 436 aa16.93■□□□□ 0.3
APTX-231ENST00000494973 PARP3Q9Y6F1 533 aa16.93■□□□□ 0.3
APTX-231ENST00000494973 CASZ1Q86V15 1759 aa16.92■□□□□ 0.3
APTX-231ENST00000494973 CASP7P55210 303 aa16.92■□□□□ 0.3
APTX-231ENST00000494973 LRRFIP2Q9Y608 721 aaKnown RBP16.92■□□□□ 0.3
APTX-231ENST00000494973 IRS4O14654 1257 aaPredicted RBP16.91■□□□□ 0.3
APTX-231ENST00000494973 PDE8AO60658 829 aa16.91■□□□□ 0.3
APTX-231ENST00000494973 MTX1Q13505 466 aa16.91■□□□□ 0.3
APTX-231ENST00000494973 FAM89AQ96GI7 184 aa16.91■□□□□ 0.3
APTX-231ENST00000494973 MYH3P11055 1940 aa16.91■□□□□ 0.3
APTX-231ENST00000494973 NRXN2Q9P2S2 1712 aa16.9■□□□□ 0.3
APTX-231ENST00000494973 POLRMTO00411 1230 aaKnown RBP16.9■□□□□ 0.3
APTX-231ENST00000494973 SERPINB2P05120 415 aa16.9■□□□□ 0.3
APTX-231ENST00000494973 RABL6Q3YEC7 729 aaPredicted RBP16.9■□□□□ 0.3
APTX-231ENST00000494973 SLC10A5Q5PT55 438 aa16.9■□□□□ 0.3
APTX-231ENST00000494973 ANKRD44Q8N8A2 993 aa16.9■□□□□ 0.3
APTX-231ENST00000494973 SUCLG2Q96I99 432 aa16.9■□□□□ 0.3
APTX-231ENST00000494973 MTFR1LQ9H019 292 aa16.9■□□□□ 0.3
APTX-231ENST00000494973 RWDD1Q9H446 243 aaPredicted RBP16.9■□□□□ 0.3
APTX-231ENST00000494973 MMP10P09238 476 aa16.89■□□□□ 0.29
APTX-231ENST00000494973 POLD1P28340 1107 aa16.89■□□□□ 0.29
APTX-231ENST00000494973 HDAC1Q13547 482 aaPredicted RBP16.89■□□□□ 0.29
APTX-231ENST00000494973 R3HDM1Q15032 1099 aaKnown RBP16.89■□□□□ 0.29
APTX-231ENST00000494973 CEP85Q6P2H3 762 aa16.89■□□□□ 0.29
APTX-231ENST00000494973 CCDC136Q96JN2 1154 aa16.89■□□□□ 0.29
APTX-231ENST00000494973 GTF3C3Q9Y5Q9 886 aa16.89■□□□□ 0.29
APTX-231ENST00000494973 FAM177BA6PVY3 158 aa16.88■□□□□ 0.29
APTX-231ENST00000494973 CTSWP56202 376 aa16.88■□□□□ 0.29
APTX-231ENST00000494973 ATP8B2P98198 1209 aa16.88■□□□□ 0.29
APTX-231ENST00000494973 BICC1Q9H694 974 aaKnown RBP16.88■□□□□ 0.29
APTX-231ENST00000494973 C1orf115Q9H7X2 142 aa16.88■□□□□ 0.29
APTX-231ENST00000494973 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
APTX-231ENST00000494973 RTL9Q8NET4 1388 aa16.88■□□□□ 0.29
APTX-231ENST00000494973 DDR1Q08345 913 aa16.87■□□□□ 0.29
APTX-231ENST00000494973 CCDC152Q4G0S7 254 aa16.87■□□□□ 0.29
APTX-231ENST00000494973 NLRP3Q96P20 1036 aa16.87■□□□□ 0.29
APTX-231ENST00000494973 DDX60Q8IY21 1712 aaKnown RBP16.87■□□□□ 0.29
APTX-231ENST00000494973 SRGAP3O43295 1099 aa16.86■□□□□ 0.29
APTX-231ENST00000494973 ERFEQ4G0M1 354 aa16.86■□□□□ 0.29
APTX-231ENST00000494973 HSP90AB4PQ58FF6 505 aa16.86■□□□□ 0.29
APTX-231ENST00000494973 RTL5Q5HYW3 569 aaPredicted RBP16.86■□□□□ 0.29
APTX-231ENST00000494973 MSL1Q68DK7 614 aa16.86■□□□□ 0.29
APTX-231ENST00000494973 PRR5LQ6MZQ0 368 aa16.86■□□□□ 0.29
APTX-231ENST00000494973 SOCS7O14512 581 aa16.85■□□□□ 0.29
APTX-231ENST00000494973 CSF1RP07333 972 aa16.85■□□□□ 0.29
APTX-231ENST00000494973 CCDC57Q2TAC2 916 aa16.85■□□□□ 0.29
APTX-231ENST00000494973 NUTM1Q86Y26 1132 aa16.85■□□□□ 0.29
APTX-231ENST00000494973 SSH3Q8TE77 659 aa16.85■□□□□ 0.29
APTX-231ENST00000494973 PCDHB15Q9Y5E8 787 aa16.85■□□□□ 0.29
APTX-231ENST00000494973 ABCC12Q96J65 1359 aa16.85■□□□□ 0.29
APTX-231ENST00000494973 FOXO4P98177 505 aa16.84■□□□□ 0.29
APTX-231ENST00000494973 SF3B3Q15393 1217 aaKnown RBP16.84■□□□□ 0.29
APTX-231ENST00000494973 LMBR1LQ6UX01 489 aa16.84■□□□□ 0.29
APTX-231ENST00000494973 CENPQQ7L2Z9 268 aaPredicted RBP16.84■□□□□ 0.29
APTX-231ENST00000494973 GCC1Q96CN9 775 aa16.84■□□□□ 0.29
APTX-231ENST00000494973 KAZALD1Q96I82 304 aa16.84■□□□□ 0.29
APTX-231ENST00000494973 BRIP1Q9BX63 1249 aa16.84■□□□□ 0.29
APTX-231ENST00000494973 FBXO3Q9UK99 471 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms