RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 CNPY2Q9Y2B0 182 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 PTPRGP23470 1445 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 CTAGE15A4D2H0 777 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 GNAI3P08754 354 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 CTAGE8P0CG41 777 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 TOP1P11387 765 aaKnown RBP7.07□□□□□ -1.28
PHC3-214ENST00000494943 FBXO38Q6PIJ6 1188 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 CTAGE6Q86UF2 777 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 CTAGE4Q8IX94 777 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 ZBTB40Q9NUA8 1239 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 CHMP3Q9Y3E7 222 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 RGS12O14924 1447 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 PPFIA4O75335 1185 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 LUC7L3O95232 432 aaKnown RBP7.07□□□□□ -1.28
PHC3-214ENST00000494943 NBPF7P0C2Y1 421 aaPredicted RBP7.07□□□□□ -1.28
PHC3-214ENST00000494943 CCT4P50991 539 aaKnown RBP7.07□□□□□ -1.28
PHC3-214ENST00000494943 GIGYF2Q6Y7W6 1299 aaKnown RBP7.07□□□□□ -1.28
PHC3-214ENST00000494943 TMC6Q7Z403 805 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 C17orf53Q8N3J3 647 aaPredicted RBP7.07□□□□□ -1.28
PHC3-214ENST00000494943 PSMD1Q99460 953 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 DIAPH1O60610 1272 aaKnown RBP7.06□□□□□ -1.28
PHC3-214ENST00000494943 CCDC121Q6ZUS5 278 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 IQUBQ8NA54 791 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 EVC2Q86UK5 1308 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 TROQ12816 1431 aaPredicted RBP7.06□□□□□ -1.28
PHC3-214ENST00000494943 CYP2E1P05181 493 aaPredicted RBP7.06□□□□□ -1.28
PHC3-214ENST00000494943 PDCD2Q16342 344 aaPredicted RBP7.06□□□□□ -1.28
PHC3-214ENST00000494943 STAG1Q8WVM7 1258 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 NUCKS1Q9H1E3 243 aaKnown RBP7.06□□□□□ -1.28
PHC3-214ENST00000494943 KDM5AP29375 1690 aaKnown RBP7.06□□□□□ -1.28
PHC3-214ENST00000494943 KCNJ6P48051 423 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 MAP2K1Q02750 393 aaPredicted RBP7.06□□□□□ -1.28
PHC3-214ENST00000494943 KRT32Q14532 448 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 PPP2R5AQ15172 486 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 ORC3Q9UBD5 711 aaPredicted RBP7.06□□□□□ -1.28
PHC3-214ENST00000494943 SWAP70Q9UH65 585 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.06□□□□□ -1.28
PHC3-214ENST00000494943 FAM135BQ49AJ0 1406 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 CLCN6P51797 869 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 KMT5BQ4FZB7 885 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 RNF187Q5TA31 235 aaPredicted RBP7.06□□□□□ -1.28
PHC3-214ENST00000494943 WWC2Q6AWC2 1192 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 LRRC8AQ8IWT6 810 aa7.06□□□□□ -1.28
PHC3-214ENST00000494943 GNL3LQ9NVN8 582 aaKnown RBP7.06□□□□□ -1.28
PHC3-214ENST00000494943 EIF3CLB5ME19 914 aaKnown RBP7.05□□□□□ -1.28
PHC3-214ENST00000494943 NBPF9Q3BBW0 867 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 TBC1D22AQ8WUA7 517 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 FMNL2Q96PY5 1086 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 EIF3CQ99613 913 aaKnown RBP7.05□□□□□ -1.28
PHC3-214ENST00000494943 AOX1Q06278 1338 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 ZBTB22O15209 634 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 HSF2BPO75031 334 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 ARID4AP29374 1257 aaPredicted RBP7.05□□□□□ -1.28
PHC3-214ENST00000494943 MSL1Q68DK7 614 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 WDR66Q8TBY9 1149 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 SSH1Q8WYL5 1049 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 CBX8Q9HC52 389 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.05□□□□□ -1.28
PHC3-214ENST00000494943 PRDM15P57071 1507 aaPredicted RBP7.05□□□□□ -1.28
PHC3-214ENST00000494943 TXLNAP40222 546 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 GNG11P61952 73 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 RRP12Q5JTH9 1297 aaKnown RBP7.05□□□□□ -1.28
PHC3-214ENST00000494943 SWT1Q5T5J6 900 aaKnown RBP7.05□□□□□ -1.28
PHC3-214ENST00000494943 SARM1Q6SZW1 724 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 MYCNP04198 464 aaPredicted RBP7.05□□□□□ -1.28
PHC3-214ENST00000494943 NAA25Q14CX7 972 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 CAMK4Q16566 473 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 SYNE3Q6ZMZ3 975 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 ARFGAP2Q8N6H7 521 aa7.05□□□□□ -1.28
PHC3-214ENST00000494943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.04□□□□□ -1.28
PHC3-214ENST00000494943 CCDC151A5D8V7 595 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 TTC36A6NLP5 189 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 GOLGA8KD6RF30 607 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 APLFQ8IW19 511 aaPredicted RBP7.04□□□□□ -1.28
PHC3-214ENST00000494943 ZGPATQ8N5A5 531 aaKnown RBP7.04□□□□□ -1.28
PHC3-214ENST00000494943 CHUKO15111 745 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 GJB2P29033 226 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 CCDC12Q8WUD4 166 aaPredicted RBP7.04□□□□□ -1.28
PHC3-214ENST00000494943 RPGRIP1Q96KN7 1286 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 ACTR5Q9H9F9 607 aaPredicted RBP7.04□□□□□ -1.28
PHC3-214ENST00000494943 ABCC10Q5T3U5 1492 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 RAB11FIP3O75154 756 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 GCKP35557 465 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 DTNBP1Q96EV8 351 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 CTAGE9A4FU28 777 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 GNAI2P04899 355 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 KIF5BP33176 963 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 RBM6P78332 1123 aaKnown RBP7.04□□□□□ -1.28
PHC3-214ENST00000494943 PSME1Q06323 249 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 CUL4AQ13619 759 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 SNCBQ16143 134 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 GRIPAP1Q4V328 841 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 RPUSD2Q8IZ73 545 aaKnown RBP7.04□□□□□ -1.28
PHC3-214ENST00000494943 ESYT1Q9BSJ8 1104 aa7.04□□□□□ -1.28
PHC3-214ENST00000494943 CORO7P57737 925 aa7.03□□□□□ -1.28
PHC3-214ENST00000494943 BATF3Q9NR55 127 aa7.03□□□□□ -1.28
PHC3-214ENST00000494943 CCDC175P0C221 793 aa7.03□□□□□ -1.28
PHC3-214ENST00000494943 CHMP4BP1P59074 171 aa7.03□□□□□ -1.28
PHC3-214ENST00000494943 MCM6Q14566 821 aa7.03□□□□□ -1.28
PHC3-214ENST00000494943 CEP85LQ5SZL2 805 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms