RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 SRPK2P78362 688 aaKnown RBP10.43□□□□□ -0.74
RPGR-210ENST00000494841 PPP1R26Q5T8A7 1209 aaPredicted RBP10.43□□□□□ -0.74
RPGR-210ENST00000494841 NFATC2IPQ8NCF5 419 aa10.43□□□□□ -0.74
RPGR-210ENST00000494841 EVC2Q86UK5 1308 aa10.42□□□□□ -0.74
RPGR-210ENST00000494841 C11orf95C9JLR9 678 aaPredicted RBP10.42□□□□□ -0.74
RPGR-210ENST00000494841 DHX9Q08211 1270 aaKnown RBP10.42□□□□□ -0.74
RPGR-210ENST00000494841 TSGA10IPQ3SY00 556 aa10.42□□□□□ -0.74
RPGR-210ENST00000494841 TBC1D9Q6ZT07 1266 aa10.42□□□□□ -0.74
RPGR-210ENST00000494841 ORAI2Q96SN7 254 aa10.42□□□□□ -0.74
RPGR-210ENST00000494841 KLF16Q9BXK1 252 aaPredicted RBP10.42□□□□□ -0.74
RPGR-210ENST00000494841 IRX2Q9BZI1 471 aaPredicted RBP10.42□□□□□ -0.74
RPGR-210ENST00000494841 TULP4Q9NRJ4 1543 aa10.42□□□□□ -0.74
RPGR-210ENST00000494841 PRR36Q9H6K5 1346 aa10.41□□□□□ -0.74
RPGR-210ENST00000494841 TOM1O60784 492 aa10.41□□□□□ -0.74
RPGR-210ENST00000494841 LAPTM4AQ15012 233 aa10.41□□□□□ -0.74
RPGR-210ENST00000494841 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
RPGR-210ENST00000494841 NUDT16Q96DE0 195 aaKnown RBP10.41□□□□□ -0.74
RPGR-210ENST00000494841 POLR3GLQ9BT43 218 aa10.41□□□□□ -0.74
RPGR-210ENST00000494841 PCDHB11Q9Y5F2 797 aa10.41□□□□□ -0.74
RPGR-210ENST00000494841 FMN2Q9NZ56 1722 aa10.41□□□□□ -0.74
RPGR-210ENST00000494841 DISP3Q9P2K9 1392 aa10.4□□□□□ -0.74
RPGR-210ENST00000494841 ADGRB2O60241 1585 aa10.4□□□□□ -0.74
RPGR-210ENST00000494841 SKIP12755 728 aa10.4□□□□□ -0.74
RPGR-210ENST00000494841 TMF1P82094 1093 aa10.4□□□□□ -0.74
RPGR-210ENST00000494841 ESCO1Q5FWF5 840 aa10.4□□□□□ -0.74
RPGR-210ENST00000494841 CCDC82Q8N4S0 544 aa10.4□□□□□ -0.74
RPGR-210ENST00000494841 PLPP7Q8NBV4 271 aa10.4□□□□□ -0.74
RPGR-210ENST00000494841 PPP1R12CQ9BZL4 782 aa10.4□□□□□ -0.74
RPGR-210ENST00000494841 TMPRSS4Q9NRS4 437 aa10.4□□□□□ -0.74
RPGR-210ENST00000494841 DOLKQ9UPQ8 538 aa10.4□□□□□ -0.74
RPGR-210ENST00000494841 MST1RQ04912 1400 aa10.4□□□□□ -0.75
RPGR-210ENST00000494841 SBNO2Q9Y2G9 1366 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 CDC42BPGQ6DT37 1551 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 IQSEC2Q5JU85 1478 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 C1orf167Q5SNV9 1468 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 ATP9BO43861 1147 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 DGAT1O75907 488 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 AVPP01185 164 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 TRAF7Q6Q0C0 670 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 ZNF784Q8NCA9 323 aaPredicted RBP10.39□□□□□ -0.75
RPGR-210ENST00000494841 PMFBP1Q8TBY8 1022 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 DDX17Q92841 729 aaKnown RBP10.39□□□□□ -0.75
RPGR-210ENST00000494841 CDCA7Q9BWT1 371 aaPredicted RBP10.39□□□□□ -0.75
RPGR-210ENST00000494841 EMILIN1Q9Y6C2 1016 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 USP32Q8NFA0 1604 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 DCCP43146 1447 aa10.39□□□□□ -0.75
RPGR-210ENST00000494841 PALM3A6NDB9 673 aaPredicted RBP10.38□□□□□ -0.75
RPGR-210ENST00000494841 USP17L5A8MUK1 530 aa10.38□□□□□ -0.75
RPGR-210ENST00000494841 TIMP2P16035 220 aa10.38□□□□□ -0.75
RPGR-210ENST00000494841 WDR4P57081 412 aaKnown RBP10.38□□□□□ -0.75
RPGR-210ENST00000494841 ITPKCQ96DU7 683 aa10.38□□□□□ -0.75
RPGR-210ENST00000494841 CABP1Q9NZU7 370 aa10.38□□□□□ -0.75
RPGR-210ENST00000494841 TFIP11Q9UBB9 837 aaKnown RBP10.38□□□□□ -0.75
RPGR-210ENST00000494841 ZIC2O95409 532 aaPredicted RBP10.37□□□□□ -0.75
RPGR-210ENST00000494841 SCTRP47872 440 aa10.37□□□□□ -0.75
RPGR-210ENST00000494841 MAP7D1Q3KQU3 841 aa10.37□□□□□ -0.75
RPGR-210ENST00000494841 PKDCCQ504Y2 493 aa10.37□□□□□ -0.75
RPGR-210ENST00000494841 BRINP3Q76B58 766 aa10.37□□□□□ -0.75
RPGR-210ENST00000494841 TMC1Q8TDI8 760 aa10.37□□□□□ -0.75
RPGR-210ENST00000494841 CCDC97Q96F63 343 aaPredicted RBP10.37□□□□□ -0.75
RPGR-210ENST00000494841 SLC12A5Q9H2X9 1139 aa10.37□□□□□ -0.75
RPGR-210ENST00000494841 ZFAND3Q9H8U3 227 aa10.37□□□□□ -0.75
RPGR-210ENST00000494841 PGPEP1Q9NXJ5 209 aa10.37□□□□□ -0.75
RPGR-210ENST00000494841 SERPINA10Q9UK55 444 aa10.37□□□□□ -0.75
RPGR-210ENST00000494841 MAFBQ9Y5Q3 323 aaPredicted RBP10.37□□□□□ -0.75
RPGR-210ENST00000494841 FOXO3O43524 673 aa10.36□□□□□ -0.75
RPGR-210ENST00000494841 LILRA1O75019 489 aa10.36□□□□□ -0.75
RPGR-210ENST00000494841 XPCQ01831 940 aaPredicted RBP10.36□□□□□ -0.75
RPGR-210ENST00000494841 CYLDQ9NQC7 956 aa10.36□□□□□ -0.75
RPGR-210ENST00000494841 ATP7BP35670 1465 aa10.36□□□□□ -0.75
RPGR-210ENST00000494841 ROBO1Q9Y6N7 1651 aa10.35□□□□□ -0.75
RPGR-210ENST00000494841 USP17L3A6NCW0 530 aa10.35□□□□□ -0.75
RPGR-210ENST00000494841 USP17L4A6NCW7 530 aa10.35□□□□□ -0.75
RPGR-210ENST00000494841 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
RPGR-210ENST00000494841 OXLD1Q5BKU9 147 aa10.35□□□□□ -0.75
RPGR-210ENST00000494841 USP17L2Q6R6M4 530 aa10.35□□□□□ -0.75
RPGR-210ENST00000494841 USP17L1Q7RTZ2 530 aa10.35□□□□□ -0.75
RPGR-210ENST00000494841 PLEKHM2Q8IWE5 1019 aa10.35□□□□□ -0.75
RPGR-210ENST00000494841 KIF7Q2M1P5 1343 aa10.34□□□□□ -0.75
RPGR-210ENST00000494841 PPIP5K1Q6PFW1 1433 aa10.34□□□□□ -0.75
RPGR-210ENST00000494841 ANKARQ7Z5J8 1434 aa10.34□□□□□ -0.75
RPGR-210ENST00000494841 NCOA4Q13772 614 aa10.34□□□□□ -0.75
RPGR-210ENST00000494841 CDCA8Q53HL2 280 aa10.34□□□□□ -0.75
RPGR-210ENST00000494841 DEPDC4Q8N2C3 294 aa10.34□□□□□ -0.75
RPGR-210ENST00000494841 NGDNQ8NEJ9 315 aaKnown RBP10.34□□□□□ -0.75
RPGR-210ENST00000494841 PUS7Q96PZ0 661 aaKnown RBP10.34□□□□□ -0.75
RPGR-210ENST00000494841 ACEP12821 1306 aa10.33□□□□□ -0.76
RPGR-210ENST00000494841 WASHC2AQ641Q2 1341 aa10.33□□□□□ -0.76
RPGR-210ENST00000494841 MYT1Q01538 1121 aa10.33□□□□□ -0.76
RPGR-210ENST00000494841 PSME1Q06323 249 aa10.33□□□□□ -0.76
RPGR-210ENST00000494841 CC2D2BQ6DHV5 1058 aa10.33□□□□□ -0.76
RPGR-210ENST00000494841 ATAD2Q6PL18 1390 aa10.33□□□□□ -0.76
RPGR-210ENST00000494841 TOPAZ1Q8N9V7 1692 aa10.32□□□□□ -0.76
RPGR-210ENST00000494841 CCDC7Q96M83 1385 aa10.32□□□□□ -0.76
RPGR-210ENST00000494841 CAPN5O15484 640 aaPredicted RBP10.32□□□□□ -0.76
RPGR-210ENST00000494841 ADD1P35611 737 aaKnown RBP10.32□□□□□ -0.76
RPGR-210ENST00000494841 SMCPP49901 116 aaPredicted RBP10.32□□□□□ -0.76
RPGR-210ENST00000494841 CBLBQ13191 982 aa10.32□□□□□ -0.76
RPGR-210ENST00000494841 KRT28Q7Z3Y7 464 aa10.32□□□□□ -0.76
RPGR-210ENST00000494841 CRIPAKQ8N1N5 446 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms