RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 NLRP10Q86W26 655 aa12.19□□□□□ -0.46
CALCA-206ENST00000494746 FTSJ3Q8IY81 847 aaKnown RBP12.19□□□□□ -0.46
CALCA-206ENST00000494746 PANK1Q8TE04 598 aa12.19□□□□□ -0.46
CALCA-206ENST00000494746 SETDB2Q96T68 719 aa12.19□□□□□ -0.46
CALCA-206ENST00000494746 FAM177BA6PVY3 158 aa12.18□□□□□ -0.46
CALCA-206ENST00000494746 TMEM57Q8N5G2 664 aa12.18□□□□□ -0.46
CALCA-206ENST00000494746 LINS1Q8NG48 757 aa12.18□□□□□ -0.46
CALCA-206ENST00000494746 TRIM28Q13263 835 aaKnown RBP12.18□□□□□ -0.46
CALCA-206ENST00000494746 SUSD4Q5VX71 490 aa12.18□□□□□ -0.46
CALCA-206ENST00000494746 DZIP1LQ8IYY4 767 aaKnown RBP12.18□□□□□ -0.46
CALCA-206ENST00000494746 SGIP1Q9BQI5 828 aa12.18□□□□□ -0.46
CALCA-206ENST00000494746 SRCIN1Q9C0H9 1055 aa12.18□□□□□ -0.46
CALCA-206ENST00000494746 DDX60Q8IY21 1712 aaKnown RBP12.17□□□□□ -0.46
CALCA-206ENST00000494746 NTSR2O95665 410 aa12.17□□□□□ -0.46
CALCA-206ENST00000494746 PTGER2P43116 358 aa12.17□□□□□ -0.46
CALCA-206ENST00000494746 ERICH6BQ5W0A0 696 aa12.17□□□□□ -0.46
CALCA-206ENST00000494746 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.17□□□□□ -0.46
CALCA-206ENST00000494746 CCDC191Q8NCU4 936 aa12.17□□□□□ -0.46
CALCA-206ENST00000494746 CWC25Q9NXE8 425 aaPredicted RBP12.17□□□□□ -0.46
CALCA-206ENST00000494746 LAMB2P55268 1798 aa12.16□□□□□ -0.46
CALCA-206ENST00000494746 CCT4P50991 539 aaKnown RBP12.16□□□□□ -0.46
CALCA-206ENST00000494746 GCKRQ14397 625 aa12.16□□□□□ -0.46
CALCA-206ENST00000494746 PARP10Q53GL7 1025 aa12.16□□□□□ -0.46
CALCA-206ENST00000494746 INTS3Q68E01 1043 aaKnown RBP12.16□□□□□ -0.46
CALCA-206ENST00000494746 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
CALCA-206ENST00000494746 NUTM1Q86Y26 1132 aa12.16□□□□□ -0.46
CALCA-206ENST00000494746 SYNE4Q8N205 404 aa12.16□□□□□ -0.46
CALCA-206ENST00000494746 TNRC6CQ9HCJ0 1690 aaKnown RBP12.16□□□□□ -0.46
CALCA-206ENST00000494746 ANKRD31Q8N7Z5 1873 aa12.16□□□□□ -0.46
CALCA-206ENST00000494746 ABCC12Q96J65 1359 aa12.16□□□□□ -0.46
CALCA-206ENST00000494746 IBTKQ9P2D0 1353 aaPredicted RBP12.16□□□□□ -0.46
CALCA-206ENST00000494746 ALDH1L1O75891 902 aa12.16□□□□□ -0.46
CALCA-206ENST00000494746 SERPINB2P05120 415 aa12.16□□□□□ -0.46
CALCA-206ENST00000494746 RTL5Q5HYW3 569 aaPredicted RBP12.16□□□□□ -0.46
CALCA-206ENST00000494746 CCDC24Q8N4L8 307 aa12.16□□□□□ -0.46
CALCA-206ENST00000494746 JARID2Q92833 1246 aaPredicted RBP12.16□□□□□ -0.46
CALCA-206ENST00000494746 PARP3Q9Y6F1 533 aa12.16□□□□□ -0.46
CALCA-206ENST00000494746 DEKP35659 375 aaKnown RBP12.15□□□□□ -0.46
CALCA-206ENST00000494746 PDE3AQ14432 1141 aa12.15□□□□□ -0.46
CALCA-206ENST00000494746 PRR5LQ6MZQ0 368 aa12.15□□□□□ -0.46
CALCA-206ENST00000494746 ITPRIPQ8IWB1 547 aa12.15□□□□□ -0.46
CALCA-206ENST00000494746 CNBD1Q8NA66 436 aa12.15□□□□□ -0.46
CALCA-206ENST00000494746 UTP14AQ9BVJ6 771 aaKnown RBP12.15□□□□□ -0.46
CALCA-206ENST00000494746 TRMT112Q9UI30 125 aaKnown RBP12.15□□□□□ -0.46
CALCA-206ENST00000494746 KIF13BQ9NQT8 1826 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 POLD1P28340 1107 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 UBE3BQ7Z3V4 1068 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 PPP1R42Q7Z4L9 355 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 ZBTB38Q8NAP3 1195 aaPredicted RBP12.14□□□□□ -0.47
CALCA-206ENST00000494746 FAM89AQ96GI7 184 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 USP44Q9H0E7 712 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 SPON1Q9HCB6 807 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 COG6Q9Y2V7 657 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 MYH3P11055 1940 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 GRM8O00222 908 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 NBPF7P0C2Y1 421 aaPredicted RBP12.14□□□□□ -0.47
CALCA-206ENST00000494746 ERFEQ4G0M1 354 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 MEIS3Q99687 375 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 NYXQ9GZU5 481 aa12.14□□□□□ -0.47
CALCA-206ENST00000494746 SH3TC1Q8TE82 1336 aa12.13□□□□□ -0.47
CALCA-206ENST00000494746 C10orf71Q711Q0 1435 aa12.13□□□□□ -0.47
CALCA-206ENST00000494746 COL11A2P13942 1736 aaPredicted RBP12.13□□□□□ -0.47
CALCA-206ENST00000494746 PCCAP05165 728 aaPredicted RBP12.13□□□□□ -0.47
CALCA-206ENST00000494746 MS4A1P11836 297 aa12.13□□□□□ -0.47
CALCA-206ENST00000494746 CASP7P55210 303 aa12.13□□□□□ -0.47
CALCA-206ENST00000494746 MVPQ14764 893 aaKnown RBP12.13□□□□□ -0.47
CALCA-206ENST00000494746 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
CALCA-206ENST00000494746 C9orf78Q9NZ63 289 aaPredicted RBP12.13□□□□□ -0.47
CALCA-206ENST00000494746 H7C1W4 665 aa12.12□□□□□ -0.47
CALCA-206ENST00000494746 NPHP1O15259 732 aa12.12□□□□□ -0.47
CALCA-206ENST00000494746 UTYO14607 1347 aa12.12□□□□□ -0.47
CALCA-206ENST00000494746 LRP5O75197 1615 aa12.12□□□□□ -0.47
CALCA-206ENST00000494746 HCLS1P14317 486 aaPredicted RBP12.11□□□□□ -0.47
CALCA-206ENST00000494746 GTF2E1P29083 439 aaPredicted RBP12.11□□□□□ -0.47
CALCA-206ENST00000494746 IRX6P78412 446 aaPredicted RBP12.11□□□□□ -0.47
CALCA-206ENST00000494746 ST5P78524 1137 aa12.11□□□□□ -0.47
CALCA-206ENST00000494746 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
CALCA-206ENST00000494746 KIAA1551Q9HCM1 1747 aa12.11□□□□□ -0.47
CALCA-206ENST00000494746 CDHR2Q9BYE9 1310 aa12.11□□□□□ -0.47
CALCA-206ENST00000494746 IRS4O14654 1257 aaPredicted RBP12.11□□□□□ -0.47
CALCA-206ENST00000494746 KAZALD1Q96I82 304 aa12.11□□□□□ -0.47
CALCA-206ENST00000494746 RIC1Q4ADV7 1423 aa12.1□□□□□ -0.47
CALCA-206ENST00000494746 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
CALCA-206ENST00000494746 SUCLG2Q96I99 432 aa12.1□□□□□ -0.47
CALCA-206ENST00000494746 CRBNQ96SW2 442 aa12.1□□□□□ -0.47
CALCA-206ENST00000494746 DDX19BQ9UMR2 479 aa12.1□□□□□ -0.47
CALCA-206ENST00000494746 TAF1P21675 1872 aa12.1□□□□□ -0.47
CALCA-206ENST00000494746 UBTFL1P0CB47 393 aaPredicted RBP12.09□□□□□ -0.47
CALCA-206ENST00000494746 EPHA10Q5JZY3 1008 aa12.09□□□□□ -0.47
CALCA-206ENST00000494746 DLEC1Q9Y238 1755 aa12.09□□□□□ -0.47
CALCA-206ENST00000494746 COL4A1P02462 1669 aa12.09□□□□□ -0.47
CALCA-206ENST00000494746 SLC10A5Q5PT55 438 aa12.09□□□□□ -0.47
CALCA-206ENST00000494746 BRIP1Q9BX63 1249 aa12.09□□□□□ -0.47
CALCA-206ENST00000494746 C1orf115Q9H7X2 142 aa12.09□□□□□ -0.47
CALCA-206ENST00000494746 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
CALCA-206ENST00000494746 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
CALCA-206ENST00000494746 PLA2G12BQ9BX93 195 aa12.08□□□□□ -0.48
CALCA-206ENST00000494746 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
CALCA-206ENST00000494746 PPP1R1BQ9UD71 204 aaPredicted RBP12.08□□□□□ -0.48
CALCA-206ENST00000494746 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms