RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 MYH1P12882 1939 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 MYH6P13533 1939 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 MYO5AQ9Y4I1 1855 aaKnown RBP3.29□□□□□ -1.88
MDC1-208ENST00000494654 S1PR4O95977 384 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 CYP2C19P33261 490 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 RAD51AP2Q09MP3 1159 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 HDAC1Q13547 482 aaPredicted RBP3.29□□□□□ -1.88
MDC1-208ENST00000494654 NOLC1Q14978 699 aaKnown RBP eCLIP3.29□□□□□ -1.88
MDC1-208ENST00000494654 KMT5BQ4FZB7 885 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 GRIPAP1Q4V328 841 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 CC2D1BQ5T0F9 858 aaKnown RBP3.29□□□□□ -1.88
MDC1-208ENST00000494654 RNF20Q5VTR2 975 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 CNPY4Q8N129 248 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 KIF18AQ8NI77 898 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 NCAPGQ9BPX3 1015 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 TSPY26PQ9H489 355 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 TMEM63CQ9P1W3 806 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 HDAC5Q9UQL6 1122 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 STRCQ7RTU9 1775 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 COL22A1Q8NFW1 1626 aaPredicted RBP3.29□□□□□ -1.88
MDC1-208ENST00000494654 ATP7AQ04656 1500 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 SYCP2Q9BX26 1530 aa3.29□□□□□ -1.88
MDC1-208ENST00000494654 KIF13BQ9NQT8 1826 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 PIK3R4Q99570 1358 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 ZNF335Q9H4Z2 1342 aaPredicted RBP3.28□□□□□ -1.88
MDC1-208ENST00000494654 ST20-MTHFSA0A0A6YYL1 179 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 BCAR3O75815 825 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 CT47B1P0C2W7 299 aaPredicted RBP3.28□□□□□ -1.88
MDC1-208ENST00000494654 PPP2R1AP30153 589 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 HSPA1LP34931 641 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 ATP6V1AP38606 617 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 NOP2P46087 812 aaKnown RBP3.28□□□□□ -1.88
MDC1-208ENST00000494654 KCNC4Q03721 635 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 MVPQ14764 893 aaKnown RBP3.28□□□□□ -1.88
MDC1-208ENST00000494654 RABEP1Q15276 862 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 BMP2KLQ5H9B9 411 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 ICE2Q659A1 982 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 MCTP1Q6DN14 999 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 PPP1R18Q6NYC8 613 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 RSBN1LQ6PCB5 846 aaPredicted RBP3.28□□□□□ -1.88
MDC1-208ENST00000494654 BRICD5Q6PL45 260 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 NUTM1Q86Y26 1132 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 AEBP1Q8IUX7 1158 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 TXLNBQ8N3L3 684 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 GAS2L2Q8NHY3 880 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 GPT2Q8TD30 523 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 KIF2CQ99661 725 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 RASSF4Q9H2L5 321 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 IL21Q9HBE4 155 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 SLC52A1Q9NWF4 448 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 USP25Q9UHP3 1055 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 COG6Q9Y2V7 657 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 PIK3C2BO00750 1634 aa3.28□□□□□ -1.88
MDC1-208ENST00000494654 CEP170BQ9Y4F5 1589 aaPredicted RBP3.28□□□□□ -1.88
MDC1-208ENST00000494654 CDK12Q9NYV4 1490 aaPredicted RBP3.28□□□□□ -1.88
MDC1-208ENST00000494654 RGS12O14924 1447 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 PPIP5K1Q6PFW1 1433 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 NALCNQ8IZF0 1738 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 AATKQ6ZMQ8 1374 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 SBNO2Q9Y2G9 1366 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 MROH1Q8NDA8 1641 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 SYCE3A1L190 88 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 GOLGA6L6A8MZA4 724 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 CFAP99D6REC4 459 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 RNF223E7ERA6 249 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 KIF1CO43896 1103 aaKnown RBP3.27□□□□□ -1.89
MDC1-208ENST00000494654 DHX16O60231 1041 aaKnown RBP3.27□□□□□ -1.89
MDC1-208ENST00000494654 CD2BP2O95400 341 aaKnown RBP3.27□□□□□ -1.89
MDC1-208ENST00000494654 FDX1P10109 184 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 CASQ1P31415 396 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 NBPF20Q3BBV1 942 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 RIC3Q7Z5B4 369 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 WWC1Q8IX03 1113 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 DHX37Q8IY37 1157 aaKnown RBP3.27□□□□□ -1.89
MDC1-208ENST00000494654 GOLGA6L1Q8N7Z2 621 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 IQUBQ8NA54 791 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 TMEM87AQ8NBN3 555 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 KIAA1524Q8TCG1 905 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 PANK1Q8TE04 598 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 TSC1Q92574 1164 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 JARID2Q92833 1246 aaPredicted RBP3.27□□□□□ -1.89
MDC1-208ENST00000494654 SIRT1Q96EB6 747 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 KIF1BPQ96EK5 621 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 TESK2Q96S53 571 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 SPSB2Q99619 263 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 CWC22Q9HCG8 908 aaKnown RBP3.27□□□□□ -1.89
MDC1-208ENST00000494654 CHIC2Q9UKJ5 165 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 ADAMTS8Q9UP79 889 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 ADGRB3O60242 1522 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 ABCC1P33527 1531 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 NRXN1Q9ULB1 1477 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 PLCH2O75038 1416 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 FAM135BQ49AJ0 1406 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 ADGRL3Q9HAR2 1447 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 PIK3C2AO00443 1686 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 MYH7BA7E2Y1 1941 aa3.27□□□□□ -1.89
MDC1-208ENST00000494654 RPAP1Q9BWH6 1393 aaPredicted RBP3.26□□□□□ -1.89
MDC1-208ENST00000494654 PLEKHG2Q9H7P9 1386 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 PTPRCP08575 1304 aa3.26□□□□□ -1.89
MDC1-208ENST00000494654 CCDC171Q6TFL3 1326 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms