RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 DDX19AQ9NUU7 478 aaKnown RBP11.93□□□□□ -0.5
LINC00488-201ENST00000494582 GTF2A1P52655 376 aaPredicted RBP11.93□□□□□ -0.5
LINC00488-201ENST00000494582 LARP1BQ659C4 914 aaKnown RBP11.93□□□□□ -0.5
LINC00488-201ENST00000494582 SRLQ86TD4 932 aa11.93□□□□□ -0.5
LINC00488-201ENST00000494582 CCDC34Q96HJ3 373 aa11.93□□□□□ -0.5
LINC00488-201ENST00000494582 SPATA32Q96LK8 384 aa11.93□□□□□ -0.5
LINC00488-201ENST00000494582 TERF2IPQ9NYB0 399 aa11.93□□□□□ -0.5
LINC00488-201ENST00000494582 ADCY9O60503 1353 aa11.93□□□□□ -0.5
LINC00488-201ENST00000494582 YTHDC2Q9H6S0 1430 aaKnown RBP11.92□□□□□ -0.5
LINC00488-201ENST00000494582 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
LINC00488-201ENST00000494582 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 PSEN1P49768 467 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 PTH1RQ03431 593 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 TEX35Q5T0J7 233 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 ICE2Q659A1 982 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 TMCO3Q6UWJ1 677 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 DHX40Q8IX18 779 aaKnown RBP11.92□□□□□ -0.5
LINC00488-201ENST00000494582 PDRG1Q9NUG6 133 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 TPCN1Q9ULQ1 816 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 RRP15Q9Y3B9 282 aaKnown RBP11.92□□□□□ -0.5
LINC00488-201ENST00000494582 ASXL2Q76L83 1435 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 TPM4P67936 248 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 PI4K2BQ8TCG2 481 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 JAKMIP1Q96N16 626 aaKnown RBP11.92□□□□□ -0.5
LINC00488-201ENST00000494582 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
LINC00488-201ENST00000494582 MAP2P11137 1827 aaKnown RBP11.92□□□□□ -0.5
LINC00488-201ENST00000494582 ABCA9Q8IUA7 1624 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 GNAI2P04899 355 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 FOXR1Q6PIV2 292 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 CWC27Q6UX04 472 aaKnown RBP11.91□□□□□ -0.5
LINC00488-201ENST00000494582 MCM10Q7L590 875 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 PACS2Q86VP3 889 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 MIS18AQ9NYP9 233 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 KIF20BQ96Q89 1820 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 NPHP3Q7Z494 1330 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 MMP14P50281 582 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 ARMCX5Q6P1M9 558 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 PRAM1Q96QH2 718 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 TOMM22Q9NS69 142 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 CABP1Q9NZU7 370 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 ATP7AQ04656 1500 aa11.91□□□□□ -0.5
LINC00488-201ENST00000494582 GOLGA6L4A6NEF3 574 aa11.9□□□□□ -0.5
LINC00488-201ENST00000494582 GOLGA6L19H0YKK7 550 aa11.9□□□□□ -0.5
LINC00488-201ENST00000494582 CHL1O00533 1208 aa11.9□□□□□ -0.5
LINC00488-201ENST00000494582 EPB41L2O43491 1005 aaKnown RBP11.9□□□□□ -0.5
LINC00488-201ENST00000494582 TADA3O75528 432 aa11.9□□□□□ -0.5
LINC00488-201ENST00000494582 SMC1AQ14683 1233 aaKnown RBP11.9□□□□□ -0.5
LINC00488-201ENST00000494582 LARP1Q6PKG0 1096 aaKnown RBP11.9□□□□□ -0.5
LINC00488-201ENST00000494582 FBXO18Q8NFZ0 1043 aa11.9□□□□□ -0.5
LINC00488-201ENST00000494582 BICD2Q8TD16 824 aa11.9□□□□□ -0.5
LINC00488-201ENST00000494582 ERCC4Q92889 916 aaPredicted RBP11.9□□□□□ -0.5
LINC00488-201ENST00000494582 H3BQF6 201 aa11.9□□□□□ -0.5
LINC00488-201ENST00000494582 VPS53Q5VIR6 699 aa11.9□□□□□ -0.5
LINC00488-201ENST00000494582 PRPF40BQ6NWY9 871 aaKnown RBP11.9□□□□□ -0.5
LINC00488-201ENST00000494582 ATP8B2P98198 1209 aa11.89□□□□□ -0.51
LINC00488-201ENST00000494582 TCEANC2Q96MN5 208 aa11.89□□□□□ -0.51
LINC00488-201ENST00000494582 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
LINC00488-201ENST00000494582 RNF216Q9NWF9 866 aaPredicted RBP11.89□□□□□ -0.51
LINC00488-201ENST00000494582 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
LINC00488-201ENST00000494582 KIF2AO00139 706 aaPredicted RBP11.89□□□□□ -0.51
LINC00488-201ENST00000494582 LMOD3Q0VAK6 560 aa11.89□□□□□ -0.51
LINC00488-201ENST00000494582 CC2D1AQ6P1N0 951 aaPredicted RBP11.89□□□□□ -0.51
LINC00488-201ENST00000494582 UBXN4Q92575 508 aa11.89□□□□□ -0.51
LINC00488-201ENST00000494582 FBXW7Q969H0 707 aa11.89□□□□□ -0.51
LINC00488-201ENST00000494582 SETD1AO15047 1707 aaKnown RBP11.88□□□□□ -0.51
LINC00488-201ENST00000494582 LMAN1P49257 510 aa11.88□□□□□ -0.51
LINC00488-201ENST00000494582 CARD6Q9BX69 1037 aa11.88□□□□□ -0.51
LINC00488-201ENST00000494582 SCAND2PQ9GZW5 306 aaPredicted RBP11.88□□□□□ -0.51
LINC00488-201ENST00000494582 OSBPL5Q9H0X9 879 aaPredicted RBP11.88□□□□□ -0.51
LINC00488-201ENST00000494582 SH2B1Q9NRF2 756 aaPredicted RBP11.88□□□□□ -0.51
LINC00488-201ENST00000494582 DNAI1Q9UI46 699 aa11.88□□□□□ -0.51
LINC00488-201ENST00000494582 ADAM21Q9UKJ8 722 aa11.88□□□□□ -0.51
LINC00488-201ENST00000494582 GUCY2CP25092 1073 aa11.88□□□□□ -0.51
LINC00488-201ENST00000494582 TRIM65Q6PJ69 517 aa11.88□□□□□ -0.51
LINC00488-201ENST00000494582 AOPEPQ8N6M6 819 aa11.88□□□□□ -0.51
LINC00488-201ENST00000494582 GOLGA5Q8TBA6 731 aa11.88□□□□□ -0.51
LINC00488-201ENST00000494582 GOLPH3LQ9H4A5 285 aa11.88□□□□□ -0.51
LINC00488-201ENST00000494582 HECW2Q9P2P5 1572 aa11.87□□□□□ -0.51
LINC00488-201ENST00000494582 NPATQ14207 1427 aa11.87□□□□□ -0.51
LINC00488-201ENST00000494582 CCT4P50991 539 aaKnown RBP11.87□□□□□ -0.51
LINC00488-201ENST00000494582 SART3Q15020 963 aaKnown RBP11.87□□□□□ -0.51
LINC00488-201ENST00000494582 HDGFL2Q7Z4V5 671 aaPredicted RBP11.87□□□□□ -0.51
LINC00488-201ENST00000494582 DDX11Q96FC9 970 aa11.87□□□□□ -0.51
LINC00488-201ENST00000494582 ZSCAN31Q96LW9 406 aaPredicted RBP11.87□□□□□ -0.51
LINC00488-201ENST00000494582 DRC1Q96MC2 740 aa11.87□□□□□ -0.51
LINC00488-201ENST00000494582 TAF6LQ9Y6J9 622 aa11.87□□□□□ -0.51
LINC00488-201ENST00000494582 AOX1Q06278 1338 aa11.87□□□□□ -0.51
LINC00488-201ENST00000494582 ANKRD65E5RJM6 399 aa11.87□□□□□ -0.51
LINC00488-201ENST00000494582 RRS1Q15050 365 aaKnown RBP11.87□□□□□ -0.51
LINC00488-201ENST00000494582 FTOQ9C0B1 505 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC00488-201ENST00000494582 ARGLU1Q9NWB6 273 aaPredicted RBP11.87□□□□□ -0.51
LINC00488-201ENST00000494582 JRKLQ9Y4A0 524 aa11.87□□□□□ -0.51
LINC00488-201ENST00000494582 CYP46A1Q9Y6A2 500 aa11.87□□□□□ -0.51
LINC00488-201ENST00000494582 ETF1P62495 437 aaKnown RBP11.86□□□□□ -0.51
LINC00488-201ENST00000494582 STX1AQ16623 288 aa11.86□□□□□ -0.51
LINC00488-201ENST00000494582 NBPF6Q5VWK0 638 aa11.86□□□□□ -0.51
LINC00488-201ENST00000494582 NBPF4Q96M43 638 aa11.86□□□□□ -0.51
LINC00488-201ENST00000494582 FUT8Q9BYC5 575 aa11.86□□□□□ -0.51
LINC00488-201ENST00000494582 PTPRMP28827 1452 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms