RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 USHBP1Q8N6Y0 703 aa10.36□□□□□ -0.75
RAF1-212ENST00000494557 MAP4K1Q92918 833 aa10.36□□□□□ -0.75
RAF1-212ENST00000494557 SPG7Q9UQ90 795 aa10.36□□□□□ -0.75
RAF1-212ENST00000494557 PCDH11XQ9BZA7 1347 aa10.36□□□□□ -0.75
RAF1-212ENST00000494557 PCDH11YQ9BZA8 1340 aa10.36□□□□□ -0.75
RAF1-212ENST00000494557 GCKRQ14397 625 aa10.35□□□□□ -0.75
RAF1-212ENST00000494557 IFNL2Q8IZJ0 200 aa10.35□□□□□ -0.75
RAF1-212ENST00000494557 VSIG10Q8N0Z9 540 aa10.35□□□□□ -0.75
RAF1-212ENST00000494557 BCL11BQ9C0K0 894 aaPredicted RBP10.35□□□□□ -0.75
RAF1-212ENST00000494557 SNX14Q9Y5W7 946 aa10.35□□□□□ -0.75
RAF1-212ENST00000494557 SH3TC1Q8TE82 1336 aa10.35□□□□□ -0.75
RAF1-212ENST00000494557 H7C1W4 665 aa10.35□□□□□ -0.75
RAF1-212ENST00000494557 HIP1O00291 1037 aa10.35□□□□□ -0.75
RAF1-212ENST00000494557 SSFA2P28290 1259 aa10.35□□□□□ -0.75
RAF1-212ENST00000494557 VPS53Q5VIR6 699 aa10.35□□□□□ -0.75
RAF1-212ENST00000494557 EVI5LQ96CN4 794 aa10.35□□□□□ -0.75
RAF1-212ENST00000494557 MAP3K2Q9Y2U5 619 aa10.35□□□□□ -0.75
RAF1-212ENST00000494557 TNRC6CQ9HCJ0 1690 aaKnown RBP10.35□□□□□ -0.75
RAF1-212ENST00000494557 ZNF646O15015 1829 aaPredicted RBP10.34□□□□□ -0.75
RAF1-212ENST00000494557 BCL9O00512 1426 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 CIAO1O76071 339 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 ST3GAL1Q11201 340 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 C1orf141Q5JVX7 400 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 LARP1Q6PKG0 1096 aaKnown RBP10.34□□□□□ -0.75
RAF1-212ENST00000494557 GAS2L3Q86XJ1 694 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 GRPEL1Q9HAV7 217 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 BRPF3Q9ULD4 1205 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 NID2Q14112 1375 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 RIC1Q4ADV7 1423 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 MYH14Q7Z406 1995 aaKnown RBP10.34□□□□□ -0.75
RAF1-212ENST00000494557 RGL2O15211 777 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 BRINP3Q76B58 766 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 CNTROBQ8N137 903 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 SUCLG2Q96I99 432 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 CARD10Q9BWT7 1032 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 ECHDC1Q9NTX5 307 aa10.34□□□□□ -0.75
RAF1-212ENST00000494557 ATP5JP18859 108 aa10.33□□□□□ -0.76
RAF1-212ENST00000494557 CLCN1P35523 988 aa10.33□□□□□ -0.76
RAF1-212ENST00000494557 DUOX1Q9NRD9 1551 aa10.33□□□□□ -0.76
RAF1-212ENST00000494557 LTBP1Q14766 1721 aa10.33□□□□□ -0.76
RAF1-212ENST00000494557 CDK5RAP2Q96SN8 1893 aa10.33□□□□□ -0.76
RAF1-212ENST00000494557 GOLGA6L3A6NEY3 463 aa10.33□□□□□ -0.76
RAF1-212ENST00000494557 PLBD2Q8NHP8 589 aa10.33□□□□□ -0.76
RAF1-212ENST00000494557 GPT2Q8TD30 523 aa10.33□□□□□ -0.76
RAF1-212ENST00000494557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.33□□□□□ -0.76
RAF1-212ENST00000494557 SNRPA1P09661 255 aaKnown RBP10.33□□□□□ -0.76
RAF1-212ENST00000494557 EVCP57679 992 aa10.33□□□□□ -0.76
RAF1-212ENST00000494557 FOXO4P98177 505 aa10.33□□□□□ -0.76
RAF1-212ENST00000494557 TEFQ10587 303 aa10.33□□□□□ -0.76
RAF1-212ENST00000494557 ZNF512BQ96KM6 892 aaPredicted RBP10.33□□□□□ -0.76
RAF1-212ENST00000494557 SRGAP3O43295 1099 aa10.32□□□□□ -0.76
RAF1-212ENST00000494557 DDX58O95786 925 aaKnown RBP10.32□□□□□ -0.76
RAF1-212ENST00000494557 MPRIPQ6WCQ1 1025 aa10.32□□□□□ -0.76
RAF1-212ENST00000494557 ELP1O95163 1332 aa10.32□□□□□ -0.76
RAF1-212ENST00000494557 CACNA1SQ13698 1873 aa10.32□□□□□ -0.76
RAF1-212ENST00000494557 MCCP23508 829 aa10.32□□□□□ -0.76
RAF1-212ENST00000494557 PTPN12Q05209 780 aaKnown RBP10.32□□□□□ -0.76
RAF1-212ENST00000494557 CDHR2Q9BYE9 1310 aa10.32□□□□□ -0.76
RAF1-212ENST00000494557 CARMIL3Q8ND23 1372 aa10.32□□□□□ -0.76
RAF1-212ENST00000494557 RTL9Q8NET4 1388 aa10.32□□□□□ -0.76
RAF1-212ENST00000494557 PKP1Q13835 747 aa10.31□□□□□ -0.76
RAF1-212ENST00000494557 RBM43Q6ZSC3 357 aaKnown RBP10.31□□□□□ -0.76
RAF1-212ENST00000494557 ZGPATQ8N5A5 531 aaKnown RBP10.31□□□□□ -0.76
RAF1-212ENST00000494557 FUCA2Q9BTY2 467 aa10.31□□□□□ -0.76
RAF1-212ENST00000494557 HMG20BQ9P0W2 317 aa10.31□□□□□ -0.76
RAF1-212ENST00000494557 RUFY3Q7L099 469 aa10.31□□□□□ -0.76
RAF1-212ENST00000494557 PROSER2Q86WR7 435 aaPredicted RBP10.31□□□□□ -0.76
RAF1-212ENST00000494557 ISCA1Q9BUE6 129 aa10.31□□□□□ -0.76
RAF1-212ENST00000494557 BICC1Q9H694 974 aaKnown RBP10.31□□□□□ -0.76
RAF1-212ENST00000494557 SH2B1Q9NRF2 756 aaPredicted RBP10.31□□□□□ -0.76
RAF1-212ENST00000494557 QSER1Q2KHR3 1735 aa10.31□□□□□ -0.76
RAF1-212ENST00000494557 SALL1Q9NSC2 1324 aa10.31□□□□□ -0.76
RAF1-212ENST00000494557 PRAMEF22A3QJZ6 481 aa10.3□□□□□ -0.76
RAF1-212ENST00000494557 TATP17735 454 aaPredicted RBP10.3□□□□□ -0.76
RAF1-212ENST00000494557 NUTM2GQ5VZR2 741 aa10.3□□□□□ -0.76
RAF1-212ENST00000494557 SLC4A10Q6U841 1118 aa10.3□□□□□ -0.76
RAF1-212ENST00000494557 MBD3O95983 291 aa10.3□□□□□ -0.76
RAF1-212ENST00000494557 FMNL2Q96PY5 1086 aa10.3□□□□□ -0.76
RAF1-212ENST00000494557 ZMYM6O95789 1325 aa10.3□□□□□ -0.76
RAF1-212ENST00000494557 TERF1P54274 439 aa10.29□□□□□ -0.76
RAF1-212ENST00000494557 EAF2Q96CJ1 260 aaPredicted RBP10.29□□□□□ -0.76
RAF1-212ENST00000494557 ZNF496Q96IT1 587 aaPredicted RBP10.29□□□□□ -0.76
RAF1-212ENST00000494557 ZSCAN31Q96LW9 406 aaPredicted RBP10.29□□□□□ -0.76
RAF1-212ENST00000494557 HAUS7Q99871 368 aa10.29□□□□□ -0.76
RAF1-212ENST00000494557 WDR19Q8NEZ3 1342 aa10.29□□□□□ -0.76
RAF1-212ENST00000494557 ATG9AQ7Z3C6 839 aa10.29□□□□□ -0.76
RAF1-212ENST00000494557 RASEFQ8IZ41 740 aa10.29□□□□□ -0.76
RAF1-212ENST00000494557 MYH2Q9UKX2 1941 aa10.29□□□□□ -0.76
RAF1-212ENST00000494557 NBPF26B4DH59 902 aa10.29□□□□□ -0.76
RAF1-212ENST00000494557 ZSCAN23Q3MJ62 389 aa10.29□□□□□ -0.76
RAF1-212ENST00000494557 NBPF14Q5TI25 921 aa10.29□□□□□ -0.76
RAF1-212ENST00000494557 NBPF10Q6P3W6 841 aaKnown RBP10.29□□□□□ -0.76
RAF1-212ENST00000494557 NBPF15Q8N660 670 aa10.29□□□□□ -0.76
RAF1-212ENST00000494557 RGPD3A6NKT7 1758 aaPredicted RBP10.28□□□□□ -0.76
RAF1-212ENST00000494557 CCDC173Q0VFZ6 552 aa10.28□□□□□ -0.76
RAF1-212ENST00000494557 EPHA10Q5JZY3 1008 aa10.28□□□□□ -0.76
RAF1-212ENST00000494557 RGPD4Q7Z3J3 1758 aa10.28□□□□□ -0.76
RAF1-212ENST00000494557 CCDC88AQ3V6T2 1871 aa10.28□□□□□ -0.76
RAF1-212ENST00000494557 NRXN2Q9P2S2 1712 aa10.28□□□□□ -0.76
RAF1-212ENST00000494557 SURF6O75683 361 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms