RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 BRD7Q9NPI1 651 aa5.49□□□□□ -1.53
PTPN12-212ENST00000494248 PCDHGA11Q9Y5H2 935 aa5.49□□□□□ -1.53
PTPN12-212ENST00000494248 KIAA1324LA8MWY0 1029 aaPredicted RBP5.48□□□□□ -1.53
PTPN12-212ENST00000494248 EPHA4P54764 986 aa5.48□□□□□ -1.53
PTPN12-212ENST00000494248 PLAURQ03405 335 aa5.48□□□□□ -1.53
PTPN12-212ENST00000494248 TBC1D8BQ0IIM8 1120 aa5.48□□□□□ -1.53
PTPN12-212ENST00000494248 GRIK5Q16478 980 aa5.48□□□□□ -1.53
PTPN12-212ENST00000494248 DZIP1LQ8IYY4 767 aaKnown RBP5.48□□□□□ -1.53
PTPN12-212ENST00000494248 ZNF280CQ8ND82 737 aa5.48□□□□□ -1.53
PTPN12-212ENST00000494248 UBE2OQ9C0C9 1292 aaKnown RBP5.48□□□□□ -1.53
PTPN12-212ENST00000494248 IGFLR1Q9H665 355 aa5.48□□□□□ -1.53
PTPN12-212ENST00000494248 BUD31P41223 144 aaPredicted RBP5.47□□□□□ -1.53
PTPN12-212ENST00000494248 TYRO3Q06418 890 aa5.47□□□□□ -1.53
PTPN12-212ENST00000494248 IRF5Q13568 498 aa5.47□□□□□ -1.53
PTPN12-212ENST00000494248 CEP63Q96MT8 703 aa5.47□□□□□ -1.53
PTPN12-212ENST00000494248 KCNH4Q9UQ05 1017 aa5.47□□□□□ -1.53
PTPN12-212ENST00000494248 SFI1A8K8P3 1242 aa5.46□□□□□ -1.54
PTPN12-212ENST00000494248 DEAF1O75398 565 aaPredicted RBP5.46□□□□□ -1.54
PTPN12-212ENST00000494248 ALX3O95076 343 aa5.46□□□□□ -1.54
PTPN12-212ENST00000494248 TGFB1P01137 390 aa5.46□□□□□ -1.54
PTPN12-212ENST00000494248 NEUROD1Q13562 356 aa5.46□□□□□ -1.54
PTPN12-212ENST00000494248 MSL1Q68DK7 614 aa5.46□□□□□ -1.54
PTPN12-212ENST00000494248 PLPP7Q8NBV4 271 aa5.46□□□□□ -1.54
PTPN12-212ENST00000494248 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.46□□□□□ -1.54
PTPN12-212ENST00000494248 DNAJB12Q9NXW2 375 aaKnown RBP5.46□□□□□ -1.54
PTPN12-212ENST00000494248 B8ZZF3 427 aa5.45□□□□□ -1.54
PTPN12-212ENST00000494248 SLC51AQ86UW1 340 aa5.45□□□□□ -1.54
PTPN12-212ENST00000494248 BANK1Q8NDB2 785 aa5.45□□□□□ -1.54
PTPN12-212ENST00000494248 RHPN1Q8TCX5 695 aa5.45□□□□□ -1.54
PTPN12-212ENST00000494248 NEUROD4Q9HD90 331 aa5.45□□□□□ -1.54
PTPN12-212ENST00000494248 ZNF358Q9NW07 568 aa5.45□□□□□ -1.54
PTPN12-212ENST00000494248 TBC1D2BQ9UPU7 963 aa5.45□□□□□ -1.54
PTPN12-212ENST00000494248 RGS9O75916 674 aaPredicted RBP5.44□□□□□ -1.54
PTPN12-212ENST00000494248 EIF4G2P78344 907 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTPN12-212ENST00000494248 IGF2-ASQ6U949 168 aa5.44□□□□□ -1.54
PTPN12-212ENST00000494248 SLC9A9Q8IVB4 645 aa5.44□□□□□ -1.54
PTPN12-212ENST00000494248 ZNF232Q9UNY5 417 aa5.44□□□□□ -1.54
PTPN12-212ENST00000494248 GPC6Q9Y625 555 aaPredicted RBP5.44□□□□□ -1.54
PTPN12-212ENST00000494248 DLL1O00548 723 aa5.43□□□□□ -1.54
PTPN12-212ENST00000494248 SPINK2P20155 84 aa5.43□□□□□ -1.54
PTPN12-212ENST00000494248 BRPF1P55201 1214 aaPredicted RBP5.43□□□□□ -1.54
PTPN12-212ENST00000494248 MAP7D1Q3KQU3 841 aa5.43□□□□□ -1.54
PTPN12-212ENST00000494248 TNS4Q8IZW8 715 aa5.43□□□□□ -1.54
PTPN12-212ENST00000494248 DTWD1Q8N5C7 304 aa5.43□□□□□ -1.54
PTPN12-212ENST00000494248 LPIN3Q9BQK8 851 aa5.43□□□□□ -1.54
PTPN12-212ENST00000494248 ADGRE2Q9UHX3 823 aa5.43□□□□□ -1.54
PTPN12-212ENST00000494248 SUSD3Q96L08 255 aa5.42□□□□□ -1.54
PTPN12-212ENST00000494248 GSX2Q9BZM3 304 aa5.42□□□□□ -1.54
PTPN12-212ENST00000494248 HCN4Q9Y3Q4 1203 aa5.42□□□□□ -1.54
PTPN12-212ENST00000494248 SERTM1A2A2V5 107 aa5.41□□□□□ -1.54
PTPN12-212ENST00000494248 DBX1A6NMT0 343 aa5.41□□□□□ -1.54
PTPN12-212ENST00000494248 ZBTB42B2RXF5 422 aa5.41□□□□□ -1.54
PTPN12-212ENST00000494248 PIK3CDO00329 1044 aa5.41□□□□□ -1.54
PTPN12-212ENST00000494248 BACH1O14867 736 aa5.41□□□□□ -1.54
PTPN12-212ENST00000494248 PSPNO60542 156 aa5.41□□□□□ -1.54
PTPN12-212ENST00000494248 VAC14Q08AM6 782 aa5.41□□□□□ -1.54
PTPN12-212ENST00000494248 PERM1Q5SV97 790 aa5.41□□□□□ -1.54
PTPN12-212ENST00000494248 LILRA6Q6PI73 481 aa5.41□□□□□ -1.54
PTPN12-212ENST00000494248 AKTIPQ9H8T0 292 aa5.41□□□□□ -1.54
PTPN12-212ENST00000494248 CPB1P15086 417 aa5.4□□□□□ -1.54
PTPN12-212ENST00000494248 GRNP28799 593 aaKnown RBP5.4□□□□□ -1.54
PTPN12-212ENST00000494248 POTEAQ6S8J7 498 aa5.4□□□□□ -1.54
PTPN12-212ENST00000494248 FAM35AQ86V20 835 aa5.4□□□□□ -1.54
PTPN12-212ENST00000494248 ZDHHC13Q8IUH4 622 aa5.4□□□□□ -1.54
PTPN12-212ENST00000494248 PHACTR1Q9C0D0 580 aa5.4□□□□□ -1.54
PTPN12-212ENST00000494248 F8W735 103 aaPredicted RBP5.39□□□□□ -1.55
PTPN12-212ENST00000494248 IGLV1-40P01703 118 aa5.39□□□□□ -1.55
PTPN12-212ENST00000494248 C1orf53Q5VUE5 145 aa5.39□□□□□ -1.55
PTPN12-212ENST00000494248 NFKB1P19838 968 aa5.38□□□□□ -1.55
PTPN12-212ENST00000494248 GTF2IP78347 998 aa5.38□□□□□ -1.55
PTPN12-212ENST00000494248 Q6ZS46 218 aa5.38□□□□□ -1.55
PTPN12-212ENST00000494248 BTLAQ7Z6A9 289 aa5.38□□□□□ -1.55
PTPN12-212ENST00000494248 WFDC8Q8IUA0 241 aa5.38□□□□□ -1.55
PTPN12-212ENST00000494248 AGGF1Q8N302 714 aaeCLIP5.38□□□□□ -1.55
PTPN12-212ENST00000494248 TMEM130Q8N3G9 435 aa5.38□□□□□ -1.55
PTPN12-212ENST00000494248 UBL7Q96S82 380 aaPredicted RBP5.38□□□□□ -1.55
PTPN12-212ENST00000494248 ANKIB1Q9P2G1 1089 aa5.38□□□□□ -1.55
PTPN12-212ENST00000494248 RAXQ9Y2V3 346 aa5.38□□□□□ -1.55
PTPN12-212ENST00000494248 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.38□□□□□ -1.55
PTPN12-212ENST00000494248 PRR19A6NJB7 356 aa5.37□□□□□ -1.55
PTPN12-212ENST00000494248 HIRAP54198 1017 aaPredicted RBP5.37□□□□□ -1.55
PTPN12-212ENST00000494248 DTX1Q86Y01 620 aa5.37□□□□□ -1.55
PTPN12-212ENST00000494248 TSPAN10Q9H1Z9 355 aaPredicted RBP5.37□□□□□ -1.55
PTPN12-212ENST00000494248 FRRS1LQ9P0K9 344 aa5.37□□□□□ -1.55
PTPN12-212ENST00000494248 ZFATQ9P243 1243 aa5.37□□□□□ -1.55
PTPN12-212ENST00000494248 IL27Q8NEV9 243 aa5.36□□□□□ -1.55
PTPN12-212ENST00000494248 MLLT1Q03111 559 aaPredicted RBP5.35□□□□□ -1.55
PTPN12-212ENST00000494248 ARMC10Q8N2F6 343 aa5.35□□□□□ -1.55
PTPN12-212ENST00000494248 PSMA6P60900 246 aaKnown RBP5.34□□□□□ -1.55
PTPN12-212ENST00000494248 CCINQ13939 588 aa5.34□□□□□ -1.55
PTPN12-212ENST00000494248 TTC9Q92623 222 aa5.34□□□□□ -1.55
PTPN12-212ENST00000494248 MRPL18Q9H0U6 180 aaKnown RBP5.34□□□□□ -1.55
PTPN12-212ENST00000494248 EFCC1Q9HA90 598 aa5.34□□□□□ -1.55
PTPN12-212ENST00000494248 STOML1Q9UBI4 398 aa5.34□□□□□ -1.55
PTPN12-212ENST00000494248 KIAA1024Q9UPX6 916 aa5.34□□□□□ -1.55
PTPN12-212ENST00000494248 ZBTB7BO15156 539 aaPredicted RBP5.33□□□□□ -1.56
PTPN12-212ENST00000494248 PTCD1O75127 700 aaKnown RBP5.33□□□□□ -1.56
PTPN12-212ENST00000494248 PSME1Q06323 249 aa5.33□□□□□ -1.56
PTPN12-212ENST00000494248 ELMSAN1Q6PJG2 1045 aa5.33□□□□□ -1.56
PTPN12-212ENST00000494248 ABI1Q8IZP0 508 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms