RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 MEIS3Q99687 375 aa8.28□□□□□ -1.08
FNDC3B-212ENST00000494000 ATP8B2P98198 1209 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 FOXD4Q12950 439 aaPredicted RBP8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 GLIPR1L2Q4G1C9 344 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 ANKRD13DQ6ZTN6 518 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 METTL22Q9BUU2 404 aaPredicted RBP8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 TRPC5Q9UL62 973 aaPredicted RBP8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 MAP3K2Q9Y2U5 619 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 USP16Q9Y5T5 823 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 THSD7AQ9UPZ6 1657 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 COL15A1P39059 1388 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 UTYO14607 1347 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 MCCP23508 829 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 HSPA1LP34931 641 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 SETQ01105 290 aaPredicted RBP8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 FAM161AQ3B820 660 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 HSP90AB4PQ58FF6 505 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 USP44Q9H0E7 712 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 IGSF5Q9NSI5 407 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 ATG3Q9NT62 314 aa8.27□□□□□ -1.09
FNDC3B-212ENST00000494000 RIOK3O14730 519 aaKnown RBP8.26□□□□□ -1.09
FNDC3B-212ENST00000494000 CHD1LQ86WJ1 897 aa8.26□□□□□ -1.09
FNDC3B-212ENST00000494000 MPNDQ8N594 471 aa8.26□□□□□ -1.09
FNDC3B-212ENST00000494000 RAB11FIP3O75154 756 aa8.26□□□□□ -1.09
FNDC3B-212ENST00000494000 ATRNO75882 1429 aa8.26□□□□□ -1.09
FNDC3B-212ENST00000494000 SPTY2D1Q68D10 685 aaPredicted RBP8.26□□□□□ -1.09
FNDC3B-212ENST00000494000 COPS6Q7L5N1 327 aa8.26□□□□□ -1.09
FNDC3B-212ENST00000494000 LRP10Q7Z4F1 713 aa8.26□□□□□ -1.09
FNDC3B-212ENST00000494000 XAGE3Q8WTP9 111 aa8.26□□□□□ -1.09
FNDC3B-212ENST00000494000 C9orf78Q9NZ63 289 aaPredicted RBP8.26□□□□□ -1.09
FNDC3B-212ENST00000494000 ONECUT3O60422 494 aaPredicted RBP8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 MTX1Q13505 466 aa8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 GIMAP6Q6P9H5 292 aa8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 MICAL1Q8TDZ2 1067 aa8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 BACH2Q9BYV9 841 aa8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 ARFGEF2Q9Y6D5 1785 aa8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 PRAMEF22A3QJZ6 481 aa8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 PDE4AP27815 886 aa8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 PROSER3Q2NL68 480 aa8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 HSP90AB3PQ58FF7 597 aa8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 SIRT2Q8IXJ6 389 aa8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 MARCH10Q8NA82 808 aaPredicted RBP8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 GJD4Q96KN9 370 aaPredicted RBP8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 KIAA1522Q9P206 1035 aaPredicted RBP8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 PPP1R1BQ9UD71 204 aaPredicted RBP8.25□□□□□ -1.09
FNDC3B-212ENST00000494000 GRM8O00222 908 aa8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 PTCD1O75127 700 aaKnown RBP8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 MYL6BP14649 208 aa8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 PRIM1P49642 420 aaKnown RBP8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 RGS3P49796 1198 aa8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 KIF6Q6ZMV9 814 aa8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 SSH3Q8TE77 659 aa8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 RPS6KL1Q9Y6S9 549 aa8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 MAP4K4O95819 1239 aaPredicted RBP8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 FAM98CQ17RN3 349 aaKnown RBP8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 ANKRD45Q5TZF3 282 aa8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 ASAP1Q9ULH1 1129 aa8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 NUP188Q5SRE5 1749 aa8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 AFF2P51816 1311 aa8.24□□□□□ -1.09
FNDC3B-212ENST00000494000 NEURL1BA8MQ27 555 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 ANXA1P04083 346 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 IL6STP40189 918 aaPredicted RBP8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 AIMP1Q12904 312 aaKnown RBP8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 TRIM28Q13263 835 aaKnown RBP8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 NME8Q8N427 588 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 RBM42Q9BTD8 480 aaKnown RBP8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 LRRFIP2Q9Y608 721 aaKnown RBP8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 NHSQ6T4R5 1651 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 RREB1Q92766 1687 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 TJP1Q07157 1748 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 TESPA1A2RU30 521 aaPredicted RBP8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 POLA2Q14181 598 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 GCKRQ14397 625 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 ERC1Q8IUD2 1116 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 CCDC191Q8NCU4 936 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 SYTL4Q96C24 671 aaPredicted RBP8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 SPATA32Q96LK8 384 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 KLHL42Q9P2K6 505 aa8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 AFDNP55196 1824 aaKnown RBP8.23□□□□□ -1.09
FNDC3B-212ENST00000494000 NBPF26B4DH59 902 aa8.22□□□□□ -1.09
FNDC3B-212ENST00000494000 ERVV-1B6SEH8 477 aa8.22□□□□□ -1.09
FNDC3B-212ENST00000494000 CYP19A1P11511 503 aaPredicted RBP8.22□□□□□ -1.09
FNDC3B-212ENST00000494000 PDE6BP35913 854 aa8.22□□□□□ -1.09
FNDC3B-212ENST00000494000 NBPF14Q5TI25 921 aa8.22□□□□□ -1.09
FNDC3B-212ENST00000494000 NBPF10Q6P3W6 841 aaKnown RBP8.22□□□□□ -1.09
FNDC3B-212ENST00000494000 NBPF15Q8N660 670 aa8.22□□□□□ -1.09
FNDC3B-212ENST00000494000 A0A087WZG4 1122 aa8.22□□□□□ -1.09
FNDC3B-212ENST00000494000 TPD52L2O43399 206 aaKnown RBP8.22□□□□□ -1.09
FNDC3B-212ENST00000494000 DNAJC10Q8IXB1 793 aa8.22□□□□□ -1.09
FNDC3B-212ENST00000494000 MYD88Q99836 296 aa8.22□□□□□ -1.09
FNDC3B-212ENST00000494000 A1BGP04217 495 aa8.21□□□□□ -1.09
FNDC3B-212ENST00000494000 BMP2KLQ5H9B9 411 aa8.21□□□□□ -1.09
FNDC3B-212ENST00000494000 ZNF772Q68DY9 489 aaPredicted RBP8.21□□□□□ -1.09
FNDC3B-212ENST00000494000 LRRCC1Q9C099 1032 aa8.21□□□□□ -1.09
FNDC3B-212ENST00000494000 CWC25Q9NXE8 425 aaPredicted RBP8.21□□□□□ -1.09
FNDC3B-212ENST00000494000 NOP58Q9Y2X3 529 aaKnown RBP8.21□□□□□ -1.09
FNDC3B-212ENST00000494000 AOX1Q06278 1338 aa8.21□□□□□ -1.09
FNDC3B-212ENST00000494000 PALLDQ8WX93 1383 aa8.21□□□□□ -1.1
FNDC3B-212ENST00000494000 IGKV5-2P06315 115 aa8.21□□□□□ -1.1
FNDC3B-212ENST00000494000 KIF1BPQ96EK5 621 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms