RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 ZNF622Q969S3 477 aaKnown RBP eCLIP20.82■□□□□ 0.92
SATB1-217ENST00000493952 KLRG2A4D1S0 409 aaPredicted RBP20.81■□□□□ 0.92
SATB1-217ENST00000493952 ARHGAP27Q6ZUM4 889 aa20.81■□□□□ 0.92
SATB1-217ENST00000493952 PPP1R42Q7Z4L9 355 aa20.81■□□□□ 0.92
SATB1-217ENST00000493952 NLRP10Q86W26 655 aa20.81■□□□□ 0.92
SATB1-217ENST00000493952 MYH16Q9H6N6 1097 aa20.81■□□□□ 0.92
SATB1-217ENST00000493952 TIAM2Q8IVF5 1701 aa20.81■□□□□ 0.92
SATB1-217ENST00000493952 STYK1Q6J9G0 422 aa20.8■□□□□ 0.92
SATB1-217ENST00000493952 STK31Q9BXU1 1019 aa20.8■□□□□ 0.92
SATB1-217ENST00000493952 VAMP4O75379 141 aa20.79■□□□□ 0.92
SATB1-217ENST00000493952 MASTLQ96GX5 879 aa20.79■□□□□ 0.92
SATB1-217ENST00000493952 UTP14AQ9BVJ6 771 aaKnown RBP20.79■□□□□ 0.92
SATB1-217ENST00000493952 MYH3P11055 1940 aa20.78■□□□□ 0.92
SATB1-217ENST00000493952 ADCY9O60503 1353 aa20.78■□□□□ 0.92
SATB1-217ENST00000493952 RIC3Q7Z5B4 369 aa20.78■□□□□ 0.92
SATB1-217ENST00000493952 ISCA1Q9BUE6 129 aa20.78■□□□□ 0.92
SATB1-217ENST00000493952 ATP5J2-PTCD1G3V325 749 aa20.77■□□□□ 0.92
SATB1-217ENST00000493952 NPR1P16066 1061 aa20.77■□□□□ 0.92
SATB1-217ENST00000493952 CNKSR1Q969H4 720 aa20.77■□□□□ 0.92
SATB1-217ENST00000493952 ZNF428Q96B54 188 aa20.77■□□□□ 0.92
SATB1-217ENST00000493952 RNF123Q5XPI4 1314 aa20.77■□□□□ 0.91
SATB1-217ENST00000493952 CRY2Q49AN0 593 aa20.76■□□□□ 0.91
SATB1-217ENST00000493952 PRPF40BQ6NWY9 871 aaKnown RBP20.76■□□□□ 0.91
SATB1-217ENST00000493952 G2E3Q7L622 706 aa20.76■□□□□ 0.91
SATB1-217ENST00000493952 ZNF784Q8NCA9 323 aaPredicted RBP20.76■□□□□ 0.91
SATB1-217ENST00000493952 DDX58O95786 925 aaKnown RBP20.75■□□□□ 0.91
SATB1-217ENST00000493952 SLC4A2P04920 1241 aa20.75■□□□□ 0.91
SATB1-217ENST00000493952 C3orf67Q6ZVT6 689 aa20.75■□□□□ 0.91
SATB1-217ENST00000493952 SYNE4Q8N205 404 aa20.75■□□□□ 0.91
SATB1-217ENST00000493952 ZNF219Q9P2Y4 722 aaPredicted RBP20.75■□□□□ 0.91
SATB1-217ENST00000493952 TRMT112Q9UI30 125 aaKnown RBP20.75■□□□□ 0.91
SATB1-217ENST00000493952 C21orf2O43822 256 aa20.74■□□□□ 0.91
SATB1-217ENST00000493952 SLC10A5Q5PT55 438 aa20.74■□□□□ 0.91
SATB1-217ENST00000493952 MYD88Q99836 296 aa20.74■□□□□ 0.91
SATB1-217ENST00000493952 SH3TC1Q8TE82 1336 aa20.74■□□□□ 0.91
SATB1-217ENST00000493952 E9PSI1 815 aa20.73■□□□□ 0.91
SATB1-217ENST00000493952 RASSF7Q02833 373 aa20.73■□□□□ 0.91
SATB1-217ENST00000493952 MAP3K2Q9Y2U5 619 aa20.73■□□□□ 0.91
SATB1-217ENST00000493952 SLFN5Q08AF3 891 aa20.72■□□□□ 0.91
SATB1-217ENST00000493952 TRIM28Q13263 835 aaKnown RBP20.72■□□□□ 0.91
SATB1-217ENST00000493952 KSR2Q6VAB6 950 aa20.72■□□□□ 0.91
SATB1-217ENST00000493952 CDCA7LQ96GN5 454 aa20.72■□□□□ 0.91
SATB1-217ENST00000493952 METTL22Q9BUU2 404 aaPredicted RBP20.72■□□□□ 0.91
SATB1-217ENST00000493952 PI4KAP2A4QPH2 592 aa20.71■□□□□ 0.91
SATB1-217ENST00000493952 NFKBIEO00221 500 aa20.71■□□□□ 0.91
SATB1-217ENST00000493952 HCLS1P14317 486 aaPredicted RBP20.71■□□□□ 0.91
SATB1-217ENST00000493952 FLIIQ13045 1269 aa20.71■□□□□ 0.91
SATB1-217ENST00000493952 PI4KAP1Q8N8J0 262 aa20.71■□□□□ 0.91
SATB1-217ENST00000493952 RPGRQ92834 1020 aaKnown RBP20.71■□□□□ 0.91
SATB1-217ENST00000493952 NLRP3Q96P20 1036 aa20.71■□□□□ 0.91
SATB1-217ENST00000493952 ALDH1B1P30837 517 aa20.7■□□□□ 0.9
SATB1-217ENST00000493952 HOXA10P31260 410 aaPredicted RBP20.7■□□□□ 0.9
SATB1-217ENST00000493952 FAM89AQ96GI7 184 aa20.7■□□□□ 0.9
SATB1-217ENST00000493952 LRRC37AA6NMS7 1700 aa20.7■□□□□ 0.9
SATB1-217ENST00000493952 SPEF2Q9C093 1822 aa20.69■□□□□ 0.9
SATB1-217ENST00000493952 PRELPP51888 382 aa20.69■□□□□ 0.9
SATB1-217ENST00000493952 C9orf131Q5VYM1 1079 aa20.69■□□□□ 0.9
SATB1-217ENST00000493952 C7orf43Q8WVR3 580 aa20.69■□□□□ 0.9
SATB1-217ENST00000493952 COL4A1P02462 1669 aa20.69■□□□□ 0.9
SATB1-217ENST00000493952 FKBP5Q13451 457 aaPredicted RBP20.68■□□□□ 0.9
SATB1-217ENST00000493952 RTL5Q5HYW3 569 aaPredicted RBP20.68■□□□□ 0.9
SATB1-217ENST00000493952 CCDC191Q8NCU4 936 aa20.68■□□□□ 0.9
SATB1-217ENST00000493952 RBM17Q96I25 401 aaKnown RBP20.68■□□□□ 0.9
SATB1-217ENST00000493952 RNF181Q9P0P0 153 aa20.68■□□□□ 0.9
SATB1-217ENST00000493952 IGKV5-2P06315 115 aa20.67■□□□□ 0.9
SATB1-217ENST00000493952 SOGA3Q5TF21 947 aa20.67■□□□□ 0.9
SATB1-217ENST00000493952 OLFM4Q6UX06 510 aa20.67■□□□□ 0.9
SATB1-217ENST00000493952 CRAMP1Q96RY5 1269 aa20.67■□□□□ 0.9
SATB1-217ENST00000493952 SNED1Q8TER0 1413 aa20.67■□□□□ 0.9
SATB1-217ENST00000493952 TRMT2AQ8IZ69 625 aaKnown RBP20.66■□□□□ 0.9
SATB1-217ENST00000493952 ZBTB38Q8NAP3 1195 aaPredicted RBP20.66■□□□□ 0.9
SATB1-217ENST00000493952 CWC25Q9NXE8 425 aaPredicted RBP20.66■□□□□ 0.9
SATB1-217ENST00000493952 ABCC4O15439 1325 aa20.65■□□□□ 0.9
SATB1-217ENST00000493952 LTBP3Q9NS15 1303 aa20.65■□□□□ 0.9
SATB1-217ENST00000493952 LMNB1P20700 586 aa20.65■□□□□ 0.9
SATB1-217ENST00000493952 NEXNQ0ZGT2 675 aa20.65■□□□□ 0.9
SATB1-217ENST00000493952 CCDC93Q567U6 631 aa20.65■□□□□ 0.9
SATB1-217ENST00000493952 IRS4O14654 1257 aaPredicted RBP20.64■□□□□ 0.89
SATB1-217ENST00000493952 PCCAP05165 728 aaPredicted RBP20.64■□□□□ 0.89
SATB1-217ENST00000493952 CWF19L2Q2TBE0 894 aaKnown RBP20.64■□□□□ 0.89
SATB1-217ENST00000493952 SLC51AQ86UW1 340 aa20.64■□□□□ 0.89
SATB1-217ENST00000493952 ZNF526Q8TF50 670 aaPredicted RBP20.64■□□□□ 0.89
SATB1-217ENST00000493952 DNAAF4Q8WXU2 420 aa20.64■□□□□ 0.89
SATB1-217ENST00000493952 JARID2Q92833 1246 aaPredicted RBP20.64■□□□□ 0.89
SATB1-217ENST00000493952 TAOK3Q9H2K8 898 aa20.64■□□□□ 0.89
SATB1-217ENST00000493952 NEURL1BA8MQ27 555 aa20.63■□□□□ 0.89
SATB1-217ENST00000493952 PPEF1O14829 653 aaPredicted RBP20.63■□□□□ 0.89
SATB1-217ENST00000493952 F6X3S4 739 aa20.61■□□□□ 0.89
SATB1-217ENST00000493952 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
SATB1-217ENST00000493952 SF3B3Q15393 1217 aaKnown RBP20.61■□□□□ 0.89
SATB1-217ENST00000493952 DDX46Q7L014 1031 aaKnown RBP20.61■□□□□ 0.89
SATB1-217ENST00000493952 GPBP1L1Q9HC44 474 aaPredicted RBP20.61■□□□□ 0.89
SATB1-217ENST00000493952 LTBP1Q14766 1721 aa20.61■□□□□ 0.89
SATB1-217ENST00000493952 CDHR2Q9BYE9 1310 aa20.6■□□□□ 0.89
SATB1-217ENST00000493952 RTKN2Q8IZC4 609 aa20.6■□□□□ 0.89
SATB1-217ENST00000493952 MRPL50Q8N5N7 158 aaKnown RBP20.6■□□□□ 0.89
SATB1-217ENST00000493952 ZC3H4Q9UPT8 1303 aaKnown RBP20.59■□□□□ 0.89
SATB1-217ENST00000493952 FKBP4Q02790 459 aaKnown RBP eCLIP20.59■□□□□ 0.89
SATB1-217ENST00000493952 LINS1Q8NG48 757 aa20.59■□□□□ 0.89
SATB1-217ENST00000493952 SSH1Q8WYL5 1049 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms