RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 PDGFDQ9GZP0 370 aaPredicted RBP14.58□□□□□ -0.08
LSM2-214ENST00000493387 ZBTB7AO95365 584 aa14.57□□□□□ -0.08
LSM2-214ENST00000493387 MMP10P09238 476 aa14.57□□□□□ -0.08
LSM2-214ENST00000493387 CWF19L2Q2TBE0 894 aaKnown RBP14.57□□□□□ -0.08
LSM2-214ENST00000493387 SUSD4Q5VX71 490 aa14.57□□□□□ -0.08
LSM2-214ENST00000493387 MSL1Q68DK7 614 aa14.57□□□□□ -0.08
LSM2-214ENST00000493387 NBPF5PQ86XG9 351 aaPredicted RBP14.57□□□□□ -0.08
LSM2-214ENST00000493387 ITPRIPQ8IWB1 547 aa14.57□□□□□ -0.08
LSM2-214ENST00000493387 ZBTB38Q8NAP3 1195 aaPredicted RBP14.57□□□□□ -0.08
LSM2-214ENST00000493387 PANK1Q8TE04 598 aa14.57□□□□□ -0.08
LSM2-214ENST00000493387 C9orf78Q9NZ63 289 aaPredicted RBP14.57□□□□□ -0.08
LSM2-214ENST00000493387 UBN2Q6ZU65 1347 aa14.57□□□□□ -0.08
LSM2-214ENST00000493387 POLRMTO00411 1230 aaKnown RBP14.56□□□□□ -0.08
LSM2-214ENST00000493387 NPHP1O15259 732 aa14.56□□□□□ -0.08
LSM2-214ENST00000493387 SERPINB2P05120 415 aa14.56□□□□□ -0.08
LSM2-214ENST00000493387 PCCAP05165 728 aaPredicted RBP14.56□□□□□ -0.08
LSM2-214ENST00000493387 RLBP1P12271 317 aa14.56□□□□□ -0.08
LSM2-214ENST00000493387 GTF2E1P29083 439 aaPredicted RBP14.56□□□□□ -0.08
LSM2-214ENST00000493387 MVPQ14764 893 aaKnown RBP14.56□□□□□ -0.08
LSM2-214ENST00000493387 TRMT112Q9UI30 125 aaKnown RBP14.56□□□□□ -0.08
LSM2-214ENST00000493387 DDX19BQ9UMR2 479 aa14.56□□□□□ -0.08
LSM2-214ENST00000493387 TNNQ9UQP3 1299 aa14.56□□□□□ -0.08
LSM2-214ENST00000493387 CASZ1Q86V15 1759 aa14.55□□□□□ -0.08
LSM2-214ENST00000493387 H7C1W4 665 aa14.55□□□□□ -0.08
LSM2-214ENST00000493387 GRM8O00222 908 aa14.55□□□□□ -0.08
LSM2-214ENST00000493387 GNAI3P08754 354 aa14.55□□□□□ -0.08
LSM2-214ENST00000493387 DDR1Q08345 913 aa14.55□□□□□ -0.08
LSM2-214ENST00000493387 CNBD1Q8NA66 436 aa14.55□□□□□ -0.08
LSM2-214ENST00000493387 SPON1Q9HCB6 807 aa14.55□□□□□ -0.08
LSM2-214ENST00000493387 SH3TC1Q8TE82 1336 aa14.55□□□□□ -0.08
LSM2-214ENST00000493387 NTSR2O95665 410 aa14.54□□□□□ -0.08
LSM2-214ENST00000493387 ST5P78524 1137 aa14.54□□□□□ -0.08
LSM2-214ENST00000493387 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
LSM2-214ENST00000493387 COG6Q9Y2V7 657 aa14.54□□□□□ -0.08
LSM2-214ENST00000493387 UTYO14607 1347 aa14.54□□□□□ -0.08
LSM2-214ENST00000493387 ANKRD36CQ5JPF3 1778 aa14.54□□□□□ -0.08
LSM2-214ENST00000493387 CDHR2Q9BYE9 1310 aa14.53□□□□□ -0.08
LSM2-214ENST00000493387 FAM177BA6PVY3 158 aa14.53□□□□□ -0.08
LSM2-214ENST00000493387 UBTFL1P0CB47 393 aaPredicted RBP14.53□□□□□ -0.08
LSM2-214ENST00000493387 AAMPQ13685 434 aa14.53□□□□□ -0.08
LSM2-214ENST00000493387 SLC10A5Q5PT55 438 aa14.53□□□□□ -0.08
LSM2-214ENST00000493387 C20orf194Q5TEA3 1177 aa14.53□□□□□ -0.08
LSM2-214ENST00000493387 USP44Q9H0E7 712 aa14.53□□□□□ -0.08
LSM2-214ENST00000493387 ZBTB7BO15156 539 aaPredicted RBP14.52□□□□□ -0.09
LSM2-214ENST00000493387 NEFLP07196 543 aa14.52□□□□□ -0.09
LSM2-214ENST00000493387 PRR5LQ6MZQ0 368 aa14.52□□□□□ -0.09
LSM2-214ENST00000493387 UBE3BQ7Z3V4 1068 aa14.52□□□□□ -0.09
LSM2-214ENST00000493387 FAM89AQ96GI7 184 aa14.52□□□□□ -0.09
LSM2-214ENST00000493387 IRS4O14654 1257 aaPredicted RBP14.51□□□□□ -0.09
LSM2-214ENST00000493387 PLA2G12BQ9BX93 195 aa14.51□□□□□ -0.09
LSM2-214ENST00000493387 PDZRN3Q9UPQ7 1066 aa14.51□□□□□ -0.09
LSM2-214ENST00000493387 N4BP2Q86UW6 1770 aaPredicted RBP14.5□□□□□ -0.09
LSM2-214ENST00000493387 COL24A1Q17RW2 1714 aa14.5□□□□□ -0.09
LSM2-214ENST00000493387 PDE8AO60658 829 aa14.5□□□□□ -0.09
LSM2-214ENST00000493387 GNAI2P04899 355 aa14.5□□□□□ -0.09
LSM2-214ENST00000493387 CASP7P55210 303 aa14.5□□□□□ -0.09
LSM2-214ENST00000493387 ERFEQ4G0M1 354 aa14.5□□□□□ -0.09
LSM2-214ENST00000493387 NUTM1Q86Y26 1132 aa14.5□□□□□ -0.09
LSM2-214ENST00000493387 MEIS3Q99687 375 aa14.5□□□□□ -0.09
LSM2-214ENST00000493387 SGIP1Q9BQI5 828 aa14.5□□□□□ -0.09
LSM2-214ENST00000493387 BRIP1Q9BX63 1249 aa14.5□□□□□ -0.09
LSM2-214ENST00000493387 AFDNP55196 1824 aaKnown RBP14.5□□□□□ -0.09
LSM2-214ENST00000493387 NBPF7P0C2Y1 421 aaPredicted RBP14.49□□□□□ -0.09
LSM2-214ENST00000493387 PDE6BP35913 854 aa14.49□□□□□ -0.09
LSM2-214ENST00000493387 PTGER2P43116 358 aa14.49□□□□□ -0.09
LSM2-214ENST00000493387 NLRP3Q96P20 1036 aa14.49□□□□□ -0.09
LSM2-214ENST00000493387 CRBNQ96SW2 442 aa14.49□□□□□ -0.09
LSM2-214ENST00000493387 RIC1Q4ADV7 1423 aa14.49□□□□□ -0.09
LSM2-214ENST00000493387 RTL5Q5HYW3 569 aaPredicted RBP14.48□□□□□ -0.09
LSM2-214ENST00000493387 JARID2Q92833 1246 aaPredicted RBP14.48□□□□□ -0.09
LSM2-214ENST00000493387 ZBTB40Q9NUA8 1239 aa14.48□□□□□ -0.09
LSM2-214ENST00000493387 HCLS1P14317 486 aaPredicted RBP14.47□□□□□ -0.09
LSM2-214ENST00000493387 SYNE4Q8N205 404 aa14.47□□□□□ -0.09
LSM2-214ENST00000493387 SUCLG2Q96I99 432 aa14.47□□□□□ -0.09
LSM2-214ENST00000493387 CD2APQ9Y5K6 639 aa14.47□□□□□ -0.09
LSM2-214ENST00000493387 NRXN2Q9P2S2 1712 aa14.46□□□□□ -0.09
LSM2-214ENST00000493387 KLRG2A4D1S0 409 aaPredicted RBP14.46□□□□□ -0.09
LSM2-214ENST00000493387 CTSWP56202 376 aa14.46□□□□□ -0.09
LSM2-214ENST00000493387 SF3B3Q15393 1217 aaKnown RBP14.46□□□□□ -0.09
LSM2-214ENST00000493387 CCDC152Q4G0S7 254 aa14.46□□□□□ -0.09
LSM2-214ENST00000493387 LRRFIP2Q9Y608 721 aaKnown RBP14.46□□□□□ -0.09
LSM2-214ENST00000493387 ABCC12Q96J65 1359 aa14.46□□□□□ -0.1
LSM2-214ENST00000493387 CSF1RP07333 972 aa14.45□□□□□ -0.1
LSM2-214ENST00000493387 TGFB2P61812 414 aa14.45□□□□□ -0.1
LSM2-214ENST00000493387 FOXO4P98177 505 aa14.45□□□□□ -0.1
LSM2-214ENST00000493387 RABL6Q3YEC7 729 aaPredicted RBP14.45□□□□□ -0.1
LSM2-214ENST00000493387 C10orf71Q711Q0 1435 aa14.45□□□□□ -0.1
LSM2-214ENST00000493387 H0YIN7 160 aa14.44□□□□□ -0.1
LSM2-214ENST00000493387 CRY2Q49AN0 593 aa14.44□□□□□ -0.1
LSM2-214ENST00000493387 RPAP2Q8IXW5 612 aaPredicted RBP14.44□□□□□ -0.1
LSM2-214ENST00000493387 CCDC24Q8N4L8 307 aa14.44□□□□□ -0.1
LSM2-214ENST00000493387 TTLL11Q8NHH1 800 aa14.44□□□□□ -0.1
LSM2-214ENST00000493387 EXOC6Q8TAG9 804 aa14.44□□□□□ -0.1
LSM2-214ENST00000493387 KAZALD1Q96I82 304 aa14.44□□□□□ -0.1
LSM2-214ENST00000493387 BICC1Q9H694 974 aaKnown RBP14.44□□□□□ -0.1
LSM2-214ENST00000493387 PPP1R1BQ9UD71 204 aaPredicted RBP14.44□□□□□ -0.1
LSM2-214ENST00000493387 NPR1P16066 1061 aa14.43□□□□□ -0.1
LSM2-214ENST00000493387 IRX6P78412 446 aaPredicted RBP14.43□□□□□ -0.1
LSM2-214ENST00000493387 MTX1Q13505 466 aa14.43□□□□□ -0.1
LSM2-214ENST00000493387 ERICH6BQ5W0A0 696 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms