RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 USP3Q9Y6I4 520 aa8.39□□□□□ -1.07
SYCP1-208ENST00000493377 RFC5P40937 340 aa8.38□□□□□ -1.07
SYCP1-208ENST00000493377 WFDC8Q8IUA0 241 aa8.38□□□□□ -1.07
SYCP1-208ENST00000493377 IGFLR1Q9H665 355 aa8.38□□□□□ -1.07
SYCP1-208ENST00000493377 DNAJB12Q9NXW2 375 aaKnown RBP8.38□□□□□ -1.07
SYCP1-208ENST00000493377 PARP3Q9Y6F1 533 aa8.38□□□□□ -1.07
SYCP1-208ENST00000493377 DEAF1O75398 565 aaPredicted RBP8.37□□□□□ -1.07
SYCP1-208ENST00000493377 ALX3O95076 343 aa8.37□□□□□ -1.07
SYCP1-208ENST00000493377 ITGB5P18084 799 aa8.37□□□□□ -1.07
SYCP1-208ENST00000493377 SOCS7O14512 581 aa8.36□□□□□ -1.07
SYCP1-208ENST00000493377 DHX15O43143 795 aaKnown RBP8.36□□□□□ -1.07
SYCP1-208ENST00000493377 GRIK5Q16478 980 aa8.36□□□□□ -1.07
SYCP1-208ENST00000493377 DBNDD2Q9BQY9 259 aa8.36□□□□□ -1.07
SYCP1-208ENST00000493377 FRRS1LQ9P0K9 344 aa8.36□□□□□ -1.07
SYCP1-208ENST00000493377 SERTAD1Q9UHV2 236 aa8.36□□□□□ -1.07
SYCP1-208ENST00000493377 NCANO14594 1321 aa8.35□□□□□ -1.07
SYCP1-208ENST00000493377 C7orf43Q8WVR3 580 aa8.35□□□□□ -1.07
SYCP1-208ENST00000493377 CEP63Q96MT8 703 aa8.35□□□□□ -1.07
SYCP1-208ENST00000493377 KRTAP19-4Q3LI73 84 aa8.34□□□□□ -1.07
SYCP1-208ENST00000493377 KRTAP9-3Q9BYQ3 159 aa8.34□□□□□ -1.07
SYCP1-208ENST00000493377 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
SYCP1-208ENST00000493377 L3MBTL2Q969R5 705 aa8.33□□□□□ -1.08
SYCP1-208ENST00000493377 PRRG2O14669 202 aa8.32□□□□□ -1.08
SYCP1-208ENST00000493377 GLB1P16278 677 aa8.32□□□□□ -1.08
SYCP1-208ENST00000493377 PCSK7Q16549 785 aa8.32□□□□□ -1.08
SYCP1-208ENST00000493377 TSGA10IPQ3SY00 556 aa8.32□□□□□ -1.08
SYCP1-208ENST00000493377 RNF43Q68DV7 783 aa8.32□□□□□ -1.08
SYCP1-208ENST00000493377 ZDHHC1Q8WTX9 485 aa8.32□□□□□ -1.08
SYCP1-208ENST00000493377 ANGEL1Q9UNK9 670 aaKnown RBP8.32□□□□□ -1.08
SYCP1-208ENST00000493377 BRPF1P55201 1214 aaPredicted RBP8.31□□□□□ -1.08
SYCP1-208ENST00000493377 PLCB2Q00722 1185 aa8.31□□□□□ -1.08
SYCP1-208ENST00000493377 TEAD4Q15561 434 aa8.31□□□□□ -1.08
SYCP1-208ENST00000493377 TMEM259Q4ZIN3 620 aa8.31□□□□□ -1.08
SYCP1-208ENST00000493377 ZNF648Q5T619 568 aaPredicted RBP8.31□□□□□ -1.08
SYCP1-208ENST00000493377 DCAF11Q8TEB1 546 aa8.31□□□□□ -1.08
SYCP1-208ENST00000493377 ANKIB1Q9P2G1 1089 aa8.31□□□□□ -1.08
SYCP1-208ENST00000493377 TMEM229AB2RXF0 380 aa8.3□□□□□ -1.08
SYCP1-208ENST00000493377 TYRO3Q06418 890 aa8.3□□□□□ -1.08
SYCP1-208ENST00000493377 ZNF124Q15973 351 aa8.3□□□□□ -1.08
SYCP1-208ENST00000493377 FAM35AQ86V20 835 aa8.3□□□□□ -1.08
SYCP1-208ENST00000493377 PHTF2Q8N3S3 785 aa8.3□□□□□ -1.08
SYCP1-208ENST00000493377 RHPN1Q8TCX5 695 aa8.3□□□□□ -1.08
SYCP1-208ENST00000493377 TTC9Q92623 222 aa8.3□□□□□ -1.08
SYCP1-208ENST00000493377 LPIN3Q9BQK8 851 aa8.3□□□□□ -1.08
SYCP1-208ENST00000493377 C7orf69Q9H7B7 122 aa8.29□□□□□ -1.08
SYCP1-208ENST00000493377 ZNF865P0CJ78 1059 aaPredicted RBP8.28□□□□□ -1.08
SYCP1-208ENST00000493377 NOS2P35228 1153 aa8.28□□□□□ -1.08
SYCP1-208ENST00000493377 SRA1Q9HD15 236 aaKnown RBP8.28□□□□□ -1.08
SYCP1-208ENST00000493377 UVSSAQ2YD98 709 aa8.27□□□□□ -1.09
SYCP1-208ENST00000493377 UBL7Q96S82 380 aaPredicted RBP8.27□□□□□ -1.09
SYCP1-208ENST00000493377 SCHIP1Q9P0W5 487 aaPredicted RBP8.27□□□□□ -1.09
SYCP1-208ENST00000493377 CHIC2Q9UKJ5 165 aa8.27□□□□□ -1.09
SYCP1-208ENST00000493377 PKN1Q16512 942 aa8.26□□□□□ -1.09
SYCP1-208ENST00000493377 SLFNL1Q499Z3 407 aa8.26□□□□□ -1.09
SYCP1-208ENST00000493377 TRIM42Q8IWZ5 723 aa8.26□□□□□ -1.09
SYCP1-208ENST00000493377 ARMC10Q8N2F6 343 aa8.26□□□□□ -1.09
SYCP1-208ENST00000493377 FBXL18Q96ME1 805 aa8.26□□□□□ -1.09
SYCP1-208ENST00000493377 CPB1P15086 417 aa8.25□□□□□ -1.09
SYCP1-208ENST00000493377 LILRA6Q6PI73 481 aa8.25□□□□□ -1.09
SYCP1-208ENST00000493377 SFI1A8K8P3 1242 aa8.24□□□□□ -1.09
SYCP1-208ENST00000493377 B8ZZF3 427 aa8.24□□□□□ -1.09
SYCP1-208ENST00000493377 BACH1O14867 736 aa8.24□□□□□ -1.09
SYCP1-208ENST00000493377 AGGF1Q8N302 714 aaeCLIP8.24□□□□□ -1.09
SYCP1-208ENST00000493377 SHKBP1Q8TBC3 707 aa8.24□□□□□ -1.09
SYCP1-208ENST00000493377 PNMA5Q96PV4 448 aa8.24□□□□□ -1.09
SYCP1-208ENST00000493377 CEP41Q9BYV8 373 aa8.24□□□□□ -1.09
SYCP1-208ENST00000493377 ZNF232Q9UNY5 417 aa8.24□□□□□ -1.09
SYCP1-208ENST00000493377 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.24□□□□□ -1.09
SYCP1-208ENST00000493377 GPR37L1O60883 481 aa8.23□□□□□ -1.09
SYCP1-208ENST00000493377 PERM1Q5SV97 790 aa8.23□□□□□ -1.09
SYCP1-208ENST00000493377 ELMSAN1Q6PJG2 1045 aa8.23□□□□□ -1.09
SYCP1-208ENST00000493377 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.23□□□□□ -1.09
SYCP1-208ENST00000493377 MAP4K3Q8IVH8 894 aa8.23□□□□□ -1.09
SYCP1-208ENST00000493377 HMX2A2RU54 273 aa8.22□□□□□ -1.09
SYCP1-208ENST00000493377 C1orf53Q5VUE5 145 aa8.22□□□□□ -1.09
SYCP1-208ENST00000493377 UTP4Q969X6 686 aaKnown RBP8.22□□□□□ -1.09
SYCP1-208ENST00000493377 HSH2DQ96JZ2 352 aa8.22□□□□□ -1.09
SYCP1-208ENST00000493377 PLAURQ03405 335 aa8.21□□□□□ -1.1
SYCP1-208ENST00000493377 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
SYCP1-208ENST00000493377 CCDC39Q9UFE4 941 aa8.21□□□□□ -1.1
SYCP1-208ENST00000493377 FARP2O94887 1054 aaPredicted RBP8.2□□□□□ -1.1
SYCP1-208ENST00000493377 PRNPP04156 253 aa8.2□□□□□ -1.1
SYCP1-208ENST00000493377 VSIG10LQ86VR7 867 aa8.2□□□□□ -1.1
SYCP1-208ENST00000493377 GSX2Q9BZM3 304 aa8.2□□□□□ -1.1
SYCP1-208ENST00000493377 SERTM1A2A2V5 107 aa8.19□□□□□ -1.1
SYCP1-208ENST00000493377 NFKB1P19838 968 aa8.19□□□□□ -1.1
SYCP1-208ENST00000493377 HOXA10P31260 410 aaPredicted RBP8.19□□□□□ -1.1
SYCP1-208ENST00000493377 TP53INP2Q8IXH6 220 aa8.19□□□□□ -1.1
SYCP1-208ENST00000493377 PIM2Q9P1W9 311 aa8.19□□□□□ -1.1
SYCP1-208ENST00000493377 MAP7D1Q3KQU3 841 aa8.18□□□□□ -1.1
SYCP1-208ENST00000493377 NDUFB9Q9Y6M9 179 aa8.18□□□□□ -1.1
SYCP1-208ENST00000493377 BUD31P41223 144 aaPredicted RBP8.17□□□□□ -1.1
SYCP1-208ENST00000493377 CCINQ13939 588 aa8.17□□□□□ -1.1
SYCP1-208ENST00000493377 MSMPQ1L6U9 139 aa8.17□□□□□ -1.1
SYCP1-208ENST00000493377 CLEC10AQ8IUN9 316 aa8.17□□□□□ -1.1
SYCP1-208ENST00000493377 SUSD3Q96L08 255 aa8.17□□□□□ -1.1
SYCP1-208ENST00000493377 MYRFLQ96LU7 910 aa8.17□□□□□ -1.1
SYCP1-208ENST00000493377 MAP3K6O95382 1288 aa8.16□□□□□ -1.1
SYCP1-208ENST00000493377 PAPLNO95428 1278 aa8.16□□□□□ -1.1
SYCP1-208ENST00000493377 ZNF280CQ8ND82 737 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms