RNA–Protein interactions for RNA: ENST00000492595.5

SEC22A-210, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 972 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-210ENST00000492595 GRM1Q13255 1194 aa12.41□□□□□ -0.42
SEC22A-210ENST00000492595 PRPF40BQ6NWY9 871 aaKnown RBP12.41□□□□□ -0.42
SEC22A-210ENST00000492595 BBXQ8WY36 941 aaPredicted RBP12.41□□□□□ -0.42
SEC22A-210ENST00000492595 DDX21Q9NR30 783 aaKnown RBP eCLIP12.41□□□□□ -0.42
SEC22A-210ENST00000492595 ZBTB1Q9Y2K1 713 aa12.41□□□□□ -0.42
SEC22A-210ENST00000492595 CCDC93Q567U6 631 aa12.4□□□□□ -0.42
SEC22A-210ENST00000492595 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
SEC22A-210ENST00000492595 MASTLQ96GX5 879 aa12.4□□□□□ -0.42
SEC22A-210ENST00000492595 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.42
SEC22A-210ENST00000492595 NRXN2Q9P2S2 1712 aa12.4□□□□□ -0.43
SEC22A-210ENST00000492595 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
SEC22A-210ENST00000492595 STARD3NLO95772 234 aa12.39□□□□□ -0.43
SEC22A-210ENST00000492595 CANXP27824 592 aaKnown RBP12.39□□□□□ -0.43
SEC22A-210ENST00000492595 ST5P78524 1137 aa12.39□□□□□ -0.43
SEC22A-210ENST00000492595 TBC1D9BQ66K14 1250 aa12.39□□□□□ -0.43
SEC22A-210ENST00000492595 PRR5LQ6MZQ0 368 aa12.39□□□□□ -0.43
SEC22A-210ENST00000492595 CYP4F22Q6NT55 531 aa12.39□□□□□ -0.43
SEC22A-210ENST00000492595 VSIG10Q8N0Z9 540 aa12.39□□□□□ -0.43
SEC22A-210ENST00000492595 CNBD1Q8NA66 436 aa12.39□□□□□ -0.43
SEC22A-210ENST00000492595 VIRMAQ69YN4 1812 aaKnown RBP12.39□□□□□ -0.43
SEC22A-210ENST00000492595 SRGNP10124 158 aa12.38□□□□□ -0.43
SEC22A-210ENST00000492595 TNNT2P45379 298 aaPredicted RBP12.38□□□□□ -0.43
SEC22A-210ENST00000492595 FKBP4Q02790 459 aaKnown RBP eCLIP12.38□□□□□ -0.43
SEC22A-210ENST00000492595 DGKZQ13574 1117 aa12.38□□□□□ -0.43
SEC22A-210ENST00000492595 NPM2Q86SE8 214 aaKnown RBP12.38□□□□□ -0.43
SEC22A-210ENST00000492595 GPC2Q8N158 579 aa12.38□□□□□ -0.43
SEC22A-210ENST00000492595 SLAIN1Q8ND83 568 aa12.38□□□□□ -0.43
SEC22A-210ENST00000492595 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
SEC22A-210ENST00000492595 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
SEC22A-210ENST00000492595 TSKSQ9UJT2 592 aa12.38□□□□□ -0.43
SEC22A-210ENST00000492595 RNF123Q5XPI4 1314 aa12.37□□□□□ -0.43
SEC22A-210ENST00000492595 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
SEC22A-210ENST00000492595 SCN4AP35499 1836 aa12.37□□□□□ -0.43
SEC22A-210ENST00000492595 KIF20BQ96Q89 1820 aa12.37□□□□□ -0.43
SEC22A-210ENST00000492595 G3V3G9 751 aa12.37□□□□□ -0.43
SEC22A-210ENST00000492595 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
SEC22A-210ENST00000492595 PRPF38BQ5VTL8 546 aaKnown RBP12.37□□□□□ -0.43
SEC22A-210ENST00000492595 RTKN2Q8IZC4 609 aa12.37□□□□□ -0.43
SEC22A-210ENST00000492595 CCDC24Q8N4L8 307 aa12.37□□□□□ -0.43
SEC22A-210ENST00000492595 ZNF277Q9NRM2 450 aaPredicted RBP12.37□□□□□ -0.43
SEC22A-210ENST00000492595 ADAMTS7Q9UKP4 1686 aa12.37□□□□□ -0.43
SEC22A-210ENST00000492595 CCDC88AQ3V6T2 1871 aa12.37□□□□□ -0.43
SEC22A-210ENST00000492595 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
SEC22A-210ENST00000492595 AKAP4Q5JQC9 854 aa12.36□□□□□ -0.43
SEC22A-210ENST00000492595 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
SEC22A-210ENST00000492595 TLL2Q9Y6L7 1015 aa12.36□□□□□ -0.43
SEC22A-210ENST00000492595 TJP1Q07157 1748 aa12.36□□□□□ -0.43
SEC22A-210ENST00000492595 DICER1Q9UPY3 1922 aaKnown RBP12.35□□□□□ -0.43
SEC22A-210ENST00000492595 AFDNP55196 1824 aaKnown RBP12.35□□□□□ -0.43
SEC22A-210ENST00000492595 FZD9O00144 591 aa12.35□□□□□ -0.43
SEC22A-210ENST00000492595 BRPF1P55201 1214 aaPredicted RBP12.35□□□□□ -0.43
SEC22A-210ENST00000492595 SLC39A6Q13433 755 aa12.35□□□□□ -0.43
SEC22A-210ENST00000492595 C7orf43Q8WVR3 580 aa12.35□□□□□ -0.43
SEC22A-210ENST00000492595 JDP2Q8WYK2 163 aa12.35□□□□□ -0.43
SEC22A-210ENST00000492595 ANKRD26Q9UPS8 1709 aa12.34□□□□□ -0.43
SEC22A-210ENST00000492595 FER1L6Q2WGJ9 1857 aa12.34□□□□□ -0.43
SEC22A-210ENST00000492595 AOC2O75106 756 aa12.34□□□□□ -0.43
SEC22A-210ENST00000492595 NPR1P16066 1061 aa12.34□□□□□ -0.43
SEC22A-210ENST00000492595 EIF6P56537 245 aaKnown RBP12.34□□□□□ -0.43
SEC22A-210ENST00000492595 SULT6B1Q6IMI4 303 aa12.34□□□□□ -0.43
SEC22A-210ENST00000492595 IARSP41252 1262 aaKnown RBP12.33□□□□□ -0.44
SEC22A-210ENST00000492595 CST9Q5W186 159 aa12.33□□□□□ -0.44
SEC22A-210ENST00000492595 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
SEC22A-210ENST00000492595 TTC5Q8N0Z6 440 aa12.33□□□□□ -0.44
SEC22A-210ENST00000492595 TEX13AQ9BXU3 409 aaPredicted RBP12.33□□□□□ -0.44
SEC22A-210ENST00000492595 TBC1D2BQ9UPU7 963 aa12.33□□□□□ -0.44
SEC22A-210ENST00000492595 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
SEC22A-210ENST00000492595 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
SEC22A-210ENST00000492595 SYNE4Q8N205 404 aa12.32□□□□□ -0.44
SEC22A-210ENST00000492595 HHIPL1Q96JK4 782 aa12.32□□□□□ -0.44
SEC22A-210ENST00000492595 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
SEC22A-210ENST00000492595 GJA3Q9Y6H8 435 aa12.32□□□□□ -0.44
SEC22A-210ENST00000492595 THSD7BQ9C0I4 1608 aa12.31□□□□□ -0.44
SEC22A-210ENST00000492595 RNMTO43148 476 aaKnown RBP12.31□□□□□ -0.44
SEC22A-210ENST00000492595 IL6STP40189 918 aaPredicted RBP12.31□□□□□ -0.44
SEC22A-210ENST00000492595 SAPCD2Q86UD0 394 aa12.31□□□□□ -0.44
SEC22A-210ENST00000492595 NBPF5PQ86XG9 351 aaPredicted RBP12.31□□□□□ -0.44
SEC22A-210ENST00000492595 ADAMTSL1Q8N6G6 1762 aa12.3□□□□□ -0.44
SEC22A-210ENST00000492595 TRAF5O00463 557 aa12.3□□□□□ -0.44
SEC22A-210ENST00000492595 ALDH1B1P30837 517 aa12.3□□□□□ -0.44
SEC22A-210ENST00000492595 SOX10P56693 466 aa12.3□□□□□ -0.44
SEC22A-210ENST00000492595 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
SEC22A-210ENST00000492595 FMR1Q06787 632 aaKnown RBP eCLIP12.3□□□□□ -0.44
SEC22A-210ENST00000492595 PDE4DIPQ5VU43 2346 aa12.29□□□□□ -0.44
SEC22A-210ENST00000492595 CELF2O95319 508 aaKnown RBP12.29□□□□□ -0.44
SEC22A-210ENST00000492595 CIAPIN1Q6FI81 312 aa12.29□□□□□ -0.44
SEC22A-210ENST00000492595 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
SEC22A-210ENST00000492595 PSMD1Q99460 953 aa12.29□□□□□ -0.44
SEC22A-210ENST00000492595 KLRG2A4D1S0 409 aaPredicted RBP12.28□□□□□ -0.44
SEC22A-210ENST00000492595 CAMTA2O94983 1202 aa12.28□□□□□ -0.44
SEC22A-210ENST00000492595 EPS15P42566 896 aa12.28□□□□□ -0.44
SEC22A-210ENST00000492595 NOGQ13253 232 aa12.28□□□□□ -0.44
SEC22A-210ENST00000492595 TPTE2Q6XPS3 522 aa12.28□□□□□ -0.44
SEC22A-210ENST00000492595 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
SEC22A-210ENST00000492595 TNRC18O15417 2968 aaPredicted RBP12.28□□□□□ -0.44
SEC22A-210ENST00000492595 GRIPAP1Q4V328 841 aa12.27□□□□□ -0.45
SEC22A-210ENST00000492595 CC2D2BQ6DHV5 1058 aa12.27□□□□□ -0.45
SEC22A-210ENST00000492595 CLEC4GQ6UXB4 293 aa12.27□□□□□ -0.45
SEC22A-210ENST00000492595 NBPF15Q8N660 670 aa12.27□□□□□ -0.45
SEC22A-210ENST00000492595 SLX4Q8IY92 1834 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms