RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 ARHGEF1Q92888 912 aaKnown RBP17.14■□□□□ 0.33
PTPRE-210ENST00000492479 KAZALD1Q96I82 304 aa17.14■□□□□ 0.33
PTPRE-210ENST00000492479 PLA2G12BQ9BX93 195 aa17.14■□□□□ 0.33
PTPRE-210ENST00000492479 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.33
PTPRE-210ENST00000492479 LRRFIP2Q9Y608 721 aaKnown RBP17.14■□□□□ 0.33
PTPRE-210ENST00000492479 BAG6P46379 1132 aa17.13■□□□□ 0.33
PTPRE-210ENST00000492479 ATP8B2P98198 1209 aa17.13■□□□□ 0.33
PTPRE-210ENST00000492479 RABL6Q3YEC7 729 aaPredicted RBP17.13■□□□□ 0.33
PTPRE-210ENST00000492479 TRAPPC3LQ5T215 181 aa17.13■□□□□ 0.33
PTPRE-210ENST00000492479 C1orf115Q9H7X2 142 aa17.13■□□□□ 0.33
PTPRE-210ENST00000492479 UBN2Q6ZU65 1347 aa17.13■□□□□ 0.33
PTPRE-210ENST00000492479 POLA2Q14181 598 aa17.12■□□□□ 0.33
PTPRE-210ENST00000492479 ZBTB38Q8NAP3 1195 aaPredicted RBP17.12■□□□□ 0.33
PTPRE-210ENST00000492479 FLAD1Q8NFF5 587 aa17.12■□□□□ 0.33
PTPRE-210ENST00000492479 SSH3Q8TE77 659 aa17.12■□□□□ 0.33
PTPRE-210ENST00000492479 MYH3P11055 1940 aa17.11■□□□□ 0.33
PTPRE-210ENST00000492479 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.11■□□□□ 0.33
PTPRE-210ENST00000492479 HMMRO75330 724 aa17.11■□□□□ 0.33
PTPRE-210ENST00000492479 SF3B2Q13435 895 aaKnown RBP17.11■□□□□ 0.33
PTPRE-210ENST00000492479 ZNF827Q17R98 1081 aa17.11■□□□□ 0.33
PTPRE-210ENST00000492479 SUCLG2Q96I99 432 aa17.11■□□□□ 0.33
PTPRE-210ENST00000492479 ZPR1O75312 459 aa17.1■□□□□ 0.33
PTPRE-210ENST00000492479 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
PTPRE-210ENST00000492479 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
PTPRE-210ENST00000492479 DCTPP1Q9H773 170 aa17.1■□□□□ 0.33
PTPRE-210ENST00000492479 RFC4P35249 363 aa17.09■□□□□ 0.33
PTPRE-210ENST00000492479 EN1Q05925 392 aaPredicted RBP17.09■□□□□ 0.33
PTPRE-210ENST00000492479 EZH2Q15910 746 aaKnown RBP17.09■□□□□ 0.33
PTPRE-210ENST00000492479 USPL1Q5W0Q7 1092 aa17.09■□□□□ 0.33
PTPRE-210ENST00000492479 DDX60Q8IY21 1712 aaKnown RBP17.09■□□□□ 0.33
PTPRE-210ENST00000492479 RIC1Q4ADV7 1423 aa17.08■□□□□ 0.32
PTPRE-210ENST00000492479 NTSR2O95665 410 aa17.08■□□□□ 0.32
PTPRE-210ENST00000492479 ARXQ96QS3 562 aa17.08■□□□□ 0.32
PTPRE-210ENST00000492479 BICC1Q9H694 974 aaKnown RBP17.08■□□□□ 0.32
PTPRE-210ENST00000492479 PNMA6EA0A0J9YXQ4 647 aa17.07■□□□□ 0.32
PTPRE-210ENST00000492479 GPTP24298 496 aa17.07■□□□□ 0.32
PTPRE-210ENST00000492479 FOXO4P98177 505 aa17.07■□□□□ 0.32
PTPRE-210ENST00000492479 PPP1R42Q7Z4L9 355 aa17.07■□□□□ 0.32
PTPRE-210ENST00000492479 SRP68Q9UHB9 627 aaKnown RBP17.07■□□□□ 0.32
PTPRE-210ENST00000492479 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
PTPRE-210ENST00000492479 SH3TC1Q8TE82 1336 aa17.06■□□□□ 0.32
PTPRE-210ENST00000492479 GYS1P13807 737 aa17.06■□□□□ 0.32
PTPRE-210ENST00000492479 HSP90B1P14625 803 aaKnown RBP17.06■□□□□ 0.32
PTPRE-210ENST00000492479 EPHA10Q5JZY3 1008 aa17.06■□□□□ 0.32
PTPRE-210ENST00000492479 SUSD4Q5VX71 490 aa17.06■□□□□ 0.32
PTPRE-210ENST00000492479 UTP14AQ9BVJ6 771 aaKnown RBP17.06■□□□□ 0.32
PTPRE-210ENST00000492479 NOP58Q9Y2X3 529 aaKnown RBP17.06■□□□□ 0.32
PTPRE-210ENST00000492479 NRXN2Q9P2S2 1712 aa17.06■□□□□ 0.32
PTPRE-210ENST00000492479 CARMIL3Q8ND23 1372 aa17.05■□□□□ 0.32
PTPRE-210ENST00000492479 PNPLA7Q6ZV29 1317 aa17.05■□□□□ 0.32
PTPRE-210ENST00000492479 CSF1RP07333 972 aa17.05■□□□□ 0.32
PTPRE-210ENST00000492479 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
PTPRE-210ENST00000492479 TBC1D9BQ66K14 1250 aa17.05■□□□□ 0.32
PTPRE-210ENST00000492479 TFCP2L1Q9NZI6 479 aa17.05■□□□□ 0.32
PTPRE-210ENST00000492479 RTL9Q8NET4 1388 aa17.04■□□□□ 0.32
PTPRE-210ENST00000492479 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
PTPRE-210ENST00000492479 PHF14O94880 888 aa17.04■□□□□ 0.32
PTPRE-210ENST00000492479 SLC10A5Q5PT55 438 aa17.04■□□□□ 0.32
PTPRE-210ENST00000492479 SMIM5Q71RC9 77 aa17.04■□□□□ 0.32
PTPRE-210ENST00000492479 NYXQ9GZU5 481 aa17.04■□□□□ 0.32
PTPRE-210ENST00000492479 ANO8Q9HCE9 1232 aaPredicted RBP17.04■□□□□ 0.32
PTPRE-210ENST00000492479 TRMT112Q9UI30 125 aaKnown RBP17.04■□□□□ 0.32
PTPRE-210ENST00000492479 TM4SF1P30408 202 aa17.03■□□□□ 0.32
PTPRE-210ENST00000492479 RFX5P48382 616 aaPredicted RBP17.03■□□□□ 0.32
PTPRE-210ENST00000492479 NUCB1Q02818 461 aa17.03■□□□□ 0.32
PTPRE-210ENST00000492479 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
PTPRE-210ENST00000492479 COL23A1Q86Y22 540 aaPredicted RBP17.03■□□□□ 0.32
PTPRE-210ENST00000492479 FAM89AQ96GI7 184 aa17.03■□□□□ 0.32
PTPRE-210ENST00000492479 SETDB2Q96T68 719 aa17.03■□□□□ 0.32
PTPRE-210ENST00000492479 COPRSQ9NQ92 184 aa17.03■□□□□ 0.32
PTPRE-210ENST00000492479 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
PTPRE-210ENST00000492479 LRP5O75197 1615 aa17.03■□□□□ 0.32
PTPRE-210ENST00000492479 CASZ1Q86V15 1759 aa17.02■□□□□ 0.32
PTPRE-210ENST00000492479 PDE8AO60658 829 aa17.02■□□□□ 0.32
PTPRE-210ENST00000492479 NFIXQ14938 502 aa17.02■□□□□ 0.32
PTPRE-210ENST00000492479 IRS4O14654 1257 aaPredicted RBP17.01■□□□□ 0.31
PTPRE-210ENST00000492479 RAB11FIP3O75154 756 aa17.01■□□□□ 0.31
PTPRE-210ENST00000492479 CTSWP56202 376 aa17.01■□□□□ 0.31
PTPRE-210ENST00000492479 HSP90AB4PQ58FF6 505 aa17.01■□□□□ 0.31
PTPRE-210ENST00000492479 NLGN1Q8N2Q7 840 aa17.01■□□□□ 0.31
PTPRE-210ENST00000492479 UPF1Q92900 1129 aaKnown RBP eCLIP17.01■□□□□ 0.31
PTPRE-210ENST00000492479 FBXO3Q9UK99 471 aa17.01■□□□□ 0.31
PTPRE-210ENST00000492479 LMBR1LQ6UX01 489 aa17■□□□□ 0.31
PTPRE-210ENST00000492479 TTLL11Q8NHH1 800 aa17■□□□□ 0.31
PTPRE-210ENST00000492479 PDZRN3Q9UPQ7 1066 aa17■□□□□ 0.31
PTPRE-210ENST00000492479 PTPN12Q05209 780 aaKnown RBP16.99■□□□□ 0.31
PTPRE-210ENST00000492479 TPTE2Q6XPS3 522 aa16.99■□□□□ 0.31
PTPRE-210ENST00000492479 SYNE4Q8N205 404 aa16.99■□□□□ 0.31
PTPRE-210ENST00000492479 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
PTPRE-210ENST00000492479 SF3B3Q15393 1217 aaKnown RBP16.98■□□□□ 0.31
PTPRE-210ENST00000492479 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
PTPRE-210ENST00000492479 ABCC12Q96J65 1359 aa16.98■□□□□ 0.31
PTPRE-210ENST00000492479 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
PTPRE-210ENST00000492479 NBPF5PQ86XG9 351 aaPredicted RBP16.97■□□□□ 0.31
PTPRE-210ENST00000492479 ERC1Q8IUD2 1116 aa16.97■□□□□ 0.31
PTPRE-210ENST00000492479 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
PTPRE-210ENST00000492479 CIAO1O76071 339 aa16.96■□□□□ 0.31
PTPRE-210ENST00000492479 DDR1Q08345 913 aa16.96■□□□□ 0.31
PTPRE-210ENST00000492479 ERFEQ4G0M1 354 aa16.96■□□□□ 0.31
PTPRE-210ENST00000492479 RTL5Q5HYW3 569 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms