RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 VAC14Q08AM6 782 aa6.01□□□□□ -1.45
HMGB1P30-201ENST00000492455 SLC9A9Q8IVB4 645 aa6.01□□□□□ -1.45
HMGB1P30-201ENST00000492455 ZNF358Q9NW07 568 aa6.01□□□□□ -1.45
HMGB1P30-201ENST00000492455 NOD1Q9Y239 953 aa6.01□□□□□ -1.45
HMGB1P30-201ENST00000492455 RNF114Q9Y508 228 aa6.01□□□□□ -1.45
HMGB1P30-201ENST00000492455 PCSK7Q16549 785 aa6□□□□□ -1.45
HMGB1P30-201ENST00000492455 C1orf53Q5VUE5 145 aa6□□□□□ -1.45
HMGB1P30-201ENST00000492455 PCDHGA11Q9Y5H2 935 aa6□□□□□ -1.45
HMGB1P30-201ENST00000492455 FSTP19883 344 aa5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 NOS3P29474 1203 aa5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 SOX11P35716 441 aa5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 GTF2IP78347 998 aa5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 TYRO3Q06418 890 aa5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 FLIIQ13045 1269 aa5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 WASHC4Q2M389 1173 aa5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 MSL1Q68DK7 614 aa5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 IGF2-ASQ6U949 168 aa5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 FBXO11Q86XK2 927 aa5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 HSH2DQ96JZ2 352 aa5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 DNAJB12Q9NXW2 375 aaKnown RBP5.99□□□□□ -1.45
HMGB1P30-201ENST00000492455 TAL1P17542 331 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P30-201ENST00000492455 PSMA6P60900 246 aaKnown RBP5.98□□□□□ -1.45
HMGB1P30-201ENST00000492455 FZD5Q13467 585 aa5.98□□□□□ -1.45
HMGB1P30-201ENST00000492455 HIF1AQ16665 826 aa5.98□□□□□ -1.45
HMGB1P30-201ENST00000492455 TBCELQ5QJ74 424 aa5.98□□□□□ -1.45
HMGB1P30-201ENST00000492455 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
HMGB1P30-201ENST00000492455 ERICH6Q7L0X2 663 aa5.98□□□□□ -1.45
HMGB1P30-201ENST00000492455 WFDC8Q8IUA0 241 aa5.98□□□□□ -1.45
HMGB1P30-201ENST00000492455 POM121Q96HA1 1249 aa5.98□□□□□ -1.45
HMGB1P30-201ENST00000492455 GSC2O15499 205 aa5.97□□□□□ -1.45
HMGB1P30-201ENST00000492455 LZTS3O60299 673 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P30-201ENST00000492455 CD97P48960 835 aa5.97□□□□□ -1.45
HMGB1P30-201ENST00000492455 IRF5Q13568 498 aa5.97□□□□□ -1.45
HMGB1P30-201ENST00000492455 FAM35AQ86V20 835 aa5.97□□□□□ -1.45
HMGB1P30-201ENST00000492455 CLUAP1Q96AJ1 413 aa5.97□□□□□ -1.45
HMGB1P30-201ENST00000492455 SUSD3Q96L08 255 aa5.97□□□□□ -1.45
HMGB1P30-201ENST00000492455 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
HMGB1P30-201ENST00000492455 ZMYND15Q9H091 742 aa5.97□□□□□ -1.45
HMGB1P30-201ENST00000492455 GP2P55259 537 aaKnown RBP5.96□□□□□ -1.46
HMGB1P30-201ENST00000492455 TNS4Q8IZW8 715 aa5.96□□□□□ -1.46
HMGB1P30-201ENST00000492455 C7orf43Q8WVR3 580 aa5.96□□□□□ -1.46
HMGB1P30-201ENST00000492455 MEGF10Q96KG7 1140 aa5.96□□□□□ -1.46
HMGB1P30-201ENST00000492455 PHACTR1Q9C0D0 580 aa5.96□□□□□ -1.46
HMGB1P30-201ENST00000492455 HCN4Q9Y3Q4 1203 aa5.96□□□□□ -1.46
HMGB1P30-201ENST00000492455 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P30-201ENST00000492455 SKIP12755 728 aa5.95□□□□□ -1.46
HMGB1P30-201ENST00000492455 HIRAP54198 1017 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P30-201ENST00000492455 EPHA4P54764 986 aa5.95□□□□□ -1.46
HMGB1P30-201ENST00000492455 SH3PXD2AQ5TCZ1 1133 aa5.95□□□□□ -1.46
HMGB1P30-201ENST00000492455 AKTIPQ9H8T0 292 aa5.95□□□□□ -1.46
HMGB1P30-201ENST00000492455 FRRS1LQ9P0K9 344 aa5.95□□□□□ -1.46
HMGB1P30-201ENST00000492455 NAGPAQ9UK23 515 aa5.95□□□□□ -1.46
HMGB1P30-201ENST00000492455 CPB1P15086 417 aa5.94□□□□□ -1.46
HMGB1P30-201ENST00000492455 NFKB1P19838 968 aa5.94□□□□□ -1.46
HMGB1P30-201ENST00000492455 ABL2P42684 1182 aa5.94□□□□□ -1.46
HMGB1P30-201ENST00000492455 ELMSAN1Q6PJG2 1045 aa5.94□□□□□ -1.46
HMGB1P30-201ENST00000492455 BTLAQ7Z6A9 289 aa5.94□□□□□ -1.46
HMGB1P30-201ENST00000492455 TRIM50Q86XT4 487 aa5.94□□□□□ -1.46
HMGB1P30-201ENST00000492455 DCAF11Q8TEB1 546 aa5.94□□□□□ -1.46
HMGB1P30-201ENST00000492455 COG6Q9Y2V7 657 aa5.94□□□□□ -1.46
HMGB1P30-201ENST00000492455 A6NJR5 290 aa5.93□□□□□ -1.46
HMGB1P30-201ENST00000492455 EPB42P16452 691 aa5.93□□□□□ -1.46
HMGB1P30-201ENST00000492455 GRIK1P39086 918 aa5.93□□□□□ -1.46
HMGB1P30-201ENST00000492455 CCINQ13939 588 aa5.93□□□□□ -1.46
HMGB1P30-201ENST00000492455 FNBP4Q8N3X1 1017 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P30-201ENST00000492455 ZNF280CQ8ND82 737 aa5.93□□□□□ -1.46
HMGB1P30-201ENST00000492455 OAS3Q9Y6K5 1087 aaKnown RBP5.93□□□□□ -1.46
HMGB1P30-201ENST00000492455 UBTFP17480 764 aaKnown RBP5.92□□□□□ -1.46
HMGB1P30-201ENST00000492455 ARID4AP29374 1257 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P30-201ENST00000492455 DZIP1LQ8IYY4 767 aaKnown RBP5.92□□□□□ -1.46
HMGB1P30-201ENST00000492455 MRPL18Q9H0U6 180 aaKnown RBP5.92□□□□□ -1.46
HMGB1P30-201ENST00000492455 C1orf115Q9H7X2 142 aa5.92□□□□□ -1.46
HMGB1P30-201ENST00000492455 KIAA1324LA8MWY0 1029 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P30-201ENST00000492455 SUPT5HO00267 1087 aaKnown RBP5.91□□□□□ -1.46
HMGB1P30-201ENST00000492455 NCOA4Q13772 614 aa5.91□□□□□ -1.46
HMGB1P30-201ENST00000492455 ILDR2Q71H61 639 aa5.91□□□□□ -1.46
HMGB1P30-201ENST00000492455 GSX2Q9BZM3 304 aa5.91□□□□□ -1.46
HMGB1P30-201ENST00000492455 TSPAN10Q9H1Z9 355 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P30-201ENST00000492455 GDPD2Q9HCC8 539 aa5.91□□□□□ -1.46
HMGB1P30-201ENST00000492455 PIK3CDO00329 1044 aa5.9□□□□□ -1.46
HMGB1P30-201ENST00000492455 IGLV1-40P01703 118 aa5.9□□□□□ -1.46
HMGB1P30-201ENST00000492455 ATP1A2P50993 1020 aa5.9□□□□□ -1.46
HMGB1P30-201ENST00000492455 INTS5Q6P9B9 1019 aaKnown RBP5.9□□□□□ -1.46
HMGB1P30-201ENST00000492455 NFATC2IPQ8NCF5 419 aa5.9□□□□□ -1.46
HMGB1P30-201ENST00000492455 TPCN2Q8NHX9 752 aa5.9□□□□□ -1.46
HMGB1P30-201ENST00000492455 LPIN3Q9BQK8 851 aa5.9□□□□□ -1.46
HMGB1P30-201ENST00000492455 STOML1Q9UBI4 398 aa5.9□□□□□ -1.46
HMGB1P30-201ENST00000492455 RAXQ9Y2V3 346 aa5.9□□□□□ -1.46
HMGB1P30-201ENST00000492455 RBM19Q9Y4C8 960 aaKnown RBP5.9□□□□□ -1.46
HMGB1P30-201ENST00000492455 PPP1R12BO60237 982 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P30-201ENST00000492455 TGFB1P01137 390 aa5.89□□□□□ -1.47
HMGB1P30-201ENST00000492455 PERM1Q5SV97 790 aa5.89□□□□□ -1.47
HMGB1P30-201ENST00000492455 PROSER2Q86WR7 435 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P30-201ENST00000492455 ALDH16A1Q8IZ83 802 aa5.89□□□□□ -1.47
HMGB1P30-201ENST00000492455 TTC9Q92623 222 aa5.89□□□□□ -1.47
HMGB1P30-201ENST00000492455 DLL1O00548 723 aa5.88□□□□□ -1.47
HMGB1P30-201ENST00000492455 MAP3K6O95382 1288 aa5.88□□□□□ -1.47
HMGB1P30-201ENST00000492455 GLB1P16278 677 aa5.88□□□□□ -1.47
HMGB1P30-201ENST00000492455 GRIK5Q16478 980 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms