RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 AMER1Q5JTC6 1135 aaPredicted RBP21.03■□□□□ 0.96
CDK11A-220ENST00000492390 BTBD11A6QL63 1104 aa21.02■□□□□ 0.96
CDK11A-220ENST00000492390 PIP4K2AP48426 406 aaPredicted RBP21.02■□□□□ 0.96
CDK11A-220ENST00000492390 EIF4G2P78344 907 aaKnown RBP eCLIP21.02■□□□□ 0.96
CDK11A-220ENST00000492390 CEMIPQ8WUJ3 1361 aa21.01■□□□□ 0.95
CDK11A-220ENST00000492390 KCNQ3O43525 872 aa21.01■□□□□ 0.95
CDK11A-220ENST00000492390 GTF2E1P29083 439 aaPredicted RBP21.01■□□□□ 0.95
CDK11A-220ENST00000492390 CRY2Q49AN0 593 aa21.01■□□□□ 0.95
CDK11A-220ENST00000492390 LARGE2Q8N3Y3 721 aa21.01■□□□□ 0.95
CDK11A-220ENST00000492390 COL4A5P29400 1685 aa21.01■□□□□ 0.95
CDK11A-220ENST00000492390 CASP8AP2Q9UKL3 1982 aa21.01■□□□□ 0.95
CDK11A-220ENST00000492390 FAM177BA6PVY3 158 aa21■□□□□ 0.95
CDK11A-220ENST00000492390 ADARB2Q9NS39 739 aaKnown RBP21■□□□□ 0.95
CDK11A-220ENST00000492390 CELF2O95319 508 aaKnown RBP20.99■□□□□ 0.95
CDK11A-220ENST00000492390 TNRC18O15417 2968 aaPredicted RBP20.99■□□□□ 0.95
CDK11A-220ENST00000492390 SNRPA1P09661 255 aaKnown RBP20.98■□□□□ 0.95
CDK11A-220ENST00000492390 HSPA5P11021 654 aaKnown RBP20.98■□□□□ 0.95
CDK11A-220ENST00000492390 NIM1KQ8IY84 436 aa20.97■□□□□ 0.95
CDK11A-220ENST00000492390 GPRC5DQ9NZD1 345 aa20.97■□□□□ 0.95
CDK11A-220ENST00000492390 PRAMEF22A3QJZ6 481 aa20.96■□□□□ 0.95
CDK11A-220ENST00000492390 HOXA10P31260 410 aaPredicted RBP20.96■□□□□ 0.95
CDK11A-220ENST00000492390 CIAPIN1Q6FI81 312 aa20.96■□□□□ 0.95
CDK11A-220ENST00000492390 NYXQ9GZU5 481 aa20.96■□□□□ 0.95
CDK11A-220ENST00000492390 PGAP2Q9UHJ9 254 aa20.96■□□□□ 0.95
CDK11A-220ENST00000492390 NBPF26B4DH59 902 aa20.95■□□□□ 0.94
CDK11A-220ENST00000492390 NOGQ13253 232 aa20.95■□□□□ 0.94
CDK11A-220ENST00000492390 NBPF10Q6P3W6 841 aaKnown RBP20.95■□□□□ 0.94
CDK11A-220ENST00000492390 NBPF15Q8N660 670 aa20.95■□□□□ 0.94
CDK11A-220ENST00000492390 RPGRQ92834 1020 aaKnown RBP20.95■□□□□ 0.94
CDK11A-220ENST00000492390 U2SURPO15042 1029 aaKnown RBP20.94■□□□□ 0.94
CDK11A-220ENST00000492390 HLFQ16534 295 aa20.94■□□□□ 0.94
CDK11A-220ENST00000492390 GLIS2Q9BZE0 524 aaPredicted RBP20.94■□□□□ 0.94
CDK11A-220ENST00000492390 VPS33BQ9H267 617 aa20.94■□□□□ 0.94
CDK11A-220ENST00000492390 KIF7Q2M1P5 1343 aa20.94■□□□□ 0.94
CDK11A-220ENST00000492390 ZC3H15Q8WU90 426 aaKnown RBP20.93■□□□□ 0.94
CDK11A-220ENST00000492390 ABCC12Q96J65 1359 aa20.93■□□□□ 0.94
CDK11A-220ENST00000492390 PPIP5K2O43314 1243 aa20.92■□□□□ 0.94
CDK11A-220ENST00000492390 CRAMP1Q96RY5 1269 aa20.92■□□□□ 0.94
CDK11A-220ENST00000492390 RIC1Q4ADV7 1423 aa20.91■□□□□ 0.94
CDK11A-220ENST00000492390 PRPF38BQ5VTL8 546 aaKnown RBP20.91■□□□□ 0.94
CDK11A-220ENST00000492390 NUTM1Q86Y26 1132 aa20.91■□□□□ 0.94
CDK11A-220ENST00000492390 RBM17Q96I25 401 aaKnown RBP20.91■□□□□ 0.94
CDK11A-220ENST00000492390 NPC1L1Q9UHC9 1359 aa20.91■□□□□ 0.94
CDK11A-220ENST00000492390 CDHR2Q9BYE9 1310 aa20.9■□□□□ 0.94
CDK11A-220ENST00000492390 PPEF1O14829 653 aaPredicted RBP20.9■□□□□ 0.94
CDK11A-220ENST00000492390 CXCL9Q07325 125 aa20.9■□□□□ 0.94
CDK11A-220ENST00000492390 CDC37L1Q7L3B6 337 aa20.9■□□□□ 0.94
CDK11A-220ENST00000492390 ZNF408Q9H9D4 720 aa20.9■□□□□ 0.94
CDK11A-220ENST00000492390 ZNRF3Q9ULT6 936 aa20.9■□□□□ 0.94
CDK11A-220ENST00000492390 ERVV-1B6SEH8 477 aa20.89■□□□□ 0.93
CDK11A-220ENST00000492390 ZIC5Q96T25 663 aa20.89■□□□□ 0.93
CDK11A-220ENST00000492390 TMX4Q9H1E5 349 aaPredicted RBP20.89■□□□□ 0.93
CDK11A-220ENST00000492390 COL3A1P02461 1466 aaPredicted RBP20.88■□□□□ 0.93
CDK11A-220ENST00000492390 GMPSP49915 693 aaPredicted RBP20.88■□□□□ 0.93
CDK11A-220ENST00000492390 SOX10P56693 466 aa20.88■□□□□ 0.93
CDK11A-220ENST00000492390 AOC3Q16853 763 aa20.88■□□□□ 0.93
CDK11A-220ENST00000492390 SAGE1Q9NXZ1 904 aa20.88■□□□□ 0.93
CDK11A-220ENST00000492390 IBTKQ9P2D0 1353 aaPredicted RBP20.87■□□□□ 0.93
CDK11A-220ENST00000492390 PHACTR3Q96KR7 559 aa20.87■□□□□ 0.93
CDK11A-220ENST00000492390 TCERG1O14776 1098 aaKnown RBP20.86■□□□□ 0.93
CDK11A-220ENST00000492390 HIRAP54198 1017 aaPredicted RBP20.86■□□□□ 0.93
CDK11A-220ENST00000492390 HUNKP57058 714 aa20.86■□□□□ 0.93
CDK11A-220ENST00000492390 SUPT20HQ8NEM7 779 aa20.86■□□□□ 0.93
CDK11A-220ENST00000492390 PER1O15534 1290 aaPredicted RBP20.85■□□□□ 0.93
CDK11A-220ENST00000492390 CC2D1BQ5T0F9 858 aaKnown RBP20.85■□□□□ 0.93
CDK11A-220ENST00000492390 RTF1Q92541 710 aaKnown RBP20.85■□□□□ 0.93
CDK11A-220ENST00000492390 BCL2L13Q9BXK5 485 aa20.85■□□□□ 0.93
CDK11A-220ENST00000492390 ATP6V0A2Q9Y487 856 aa20.85■□□□□ 0.93
CDK11A-220ENST00000492390 PRKAR2BP31323 418 aa20.84■□□□□ 0.93
CDK11A-220ENST00000492390 TNIP1Q15025 636 aa20.84■□□□□ 0.93
CDK11A-220ENST00000492390 SLC51AQ86UW1 340 aa20.84■□□□□ 0.93
CDK11A-220ENST00000492390 RTFDC1Q9BY42 306 aaPredicted RBP20.84■□□□□ 0.93
CDK11A-220ENST00000492390 MAP3K15Q6ZN16 1313 aa20.83■□□□□ 0.93
CDK11A-220ENST00000492390 RGMBQ6NW40 437 aa20.83■□□□□ 0.93
CDK11A-220ENST00000492390 FAM155AB1AL88 458 aaPredicted RBP20.82■□□□□ 0.92
CDK11A-220ENST00000492390 SUSD4Q5VX71 490 aa20.82■□□□□ 0.92
CDK11A-220ENST00000492390 MCM10Q7L590 875 aa20.82■□□□□ 0.92
CDK11A-220ENST00000492390 TRPM4Q8TD43 1214 aa20.82■□□□□ 0.92
CDK11A-220ENST00000492390 CCDC102AQ96A19 550 aa20.82■□□□□ 0.92
CDK11A-220ENST00000492390 RSPH6AQ9H0K4 717 aa20.82■□□□□ 0.92
CDK11A-220ENST00000492390 UBN2Q6ZU65 1347 aa20.81■□□□□ 0.92
CDK11A-220ENST00000492390 GPTP24298 496 aa20.81■□□□□ 0.92
CDK11A-220ENST00000492390 KIF6Q6ZMV9 814 aa20.81■□□□□ 0.92
CDK11A-220ENST00000492390 USP48Q86UV5 1035 aa20.81■□□□□ 0.92
CDK11A-220ENST00000492390 NGEFQ8N5V2 710 aa20.81■□□□□ 0.92
CDK11A-220ENST00000492390 NLRP3Q96P20 1036 aa20.81■□□□□ 0.92
CDK11A-220ENST00000492390 CNOT7Q9UIV1 285 aaKnown RBP20.81■□□□□ 0.92
CDK11A-220ENST00000492390 NUP98P52948 1817 aa20.81■□□□□ 0.92
CDK11A-220ENST00000492390 H7C1D1 291 aa20.8■□□□□ 0.92
CDK11A-220ENST00000492390 KIF23Q02241 960 aaPredicted RBP20.8■□□□□ 0.92
CDK11A-220ENST00000492390 KIAA2012Q0VF49 1180 aa20.8■□□□□ 0.92
CDK11A-220ENST00000492390 RNF186Q9NXI6 227 aa20.8■□□□□ 0.92
CDK11A-220ENST00000492390 ZNF316A6NFI3 1004 aaPredicted RBP20.79■□□□□ 0.92
CDK11A-220ENST00000492390 HTATSF1O43719 755 aaKnown RBP20.79■□□□□ 0.92
CDK11A-220ENST00000492390 RAD17O75943 681 aa20.79■□□□□ 0.92
CDK11A-220ENST00000492390 NTSR2O95665 410 aa20.79■□□□□ 0.92
CDK11A-220ENST00000492390 TAF7Q15545 349 aaPredicted RBP20.79■□□□□ 0.92
CDK11A-220ENST00000492390 DPP8Q6V1X1 898 aaPredicted RBP20.79■□□□□ 0.92
CDK11A-220ENST00000492390 C3orf67Q6ZVT6 689 aa20.79■□□□□ 0.92
CDK11A-220ENST00000492390 CTU1Q7Z7A3 348 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms