RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 UTP14AQ9BVJ6 771 aaKnown RBP10.75□□□□□ -0.69
LSM2-213ENST00000491421 MBIPQ9NS73 344 aa10.75□□□□□ -0.69
LSM2-213ENST00000491421 CHPF2Q9P2E5 772 aa10.75□□□□□ -0.69
LSM2-213ENST00000491421 TNRC6CQ9HCJ0 1690 aaKnown RBP10.75□□□□□ -0.69
LSM2-213ENST00000491421 SLX4Q8IY92 1834 aa10.74□□□□□ -0.69
LSM2-213ENST00000491421 SBF1O95248 1867 aa10.74□□□□□ -0.69
LSM2-213ENST00000491421 DUSP27Q5VZP5 1158 aa10.74□□□□□ -0.69
LSM2-213ENST00000491421 SMC1BQ8NDV3 1235 aa10.74□□□□□ -0.69
LSM2-213ENST00000491421 RBM17Q96I25 401 aaKnown RBP10.74□□□□□ -0.69
LSM2-213ENST00000491421 ZNF277Q9NRM2 450 aaPredicted RBP10.74□□□□□ -0.69
LSM2-213ENST00000491421 IFT57Q9NWB7 429 aa10.74□□□□□ -0.69
LSM2-213ENST00000491421 DBF4Q9UBU7 674 aaPredicted RBP10.74□□□□□ -0.69
LSM2-213ENST00000491421 TIAM2Q8IVF5 1701 aa10.74□□□□□ -0.69
LSM2-213ENST00000491421 RNF123Q5XPI4 1314 aa10.74□□□□□ -0.69
LSM2-213ENST00000491421 ZNF853P0CG23 659 aa10.73□□□□□ -0.69
LSM2-213ENST00000491421 HOXA10P31260 410 aaPredicted RBP10.73□□□□□ -0.69
LSM2-213ENST00000491421 GNAI1P63096 354 aa10.73□□□□□ -0.69
LSM2-213ENST00000491421 TCIRG1Q13488 830 aa10.73□□□□□ -0.69
LSM2-213ENST00000491421 C3orf67Q6ZVT6 689 aa10.73□□□□□ -0.69
LSM2-213ENST00000491421 NLRP10Q86W26 655 aa10.73□□□□□ -0.69
LSM2-213ENST00000491421 NLRP3Q96P20 1036 aa10.73□□□□□ -0.69
LSM2-213ENST00000491421 ARFGEF2Q9Y6D5 1785 aa10.72□□□□□ -0.69
LSM2-213ENST00000491421 FER1L6Q2WGJ9 1857 aa10.72□□□□□ -0.69
LSM2-213ENST00000491421 ZNF316A6NFI3 1004 aaPredicted RBP10.72□□□□□ -0.69
LSM2-213ENST00000491421 DDNO94850 711 aaPredicted RBP10.72□□□□□ -0.69
LSM2-213ENST00000491421 CCDC184Q52MB2 194 aa10.72□□□□□ -0.69
LSM2-213ENST00000491421 CC2D2BQ6DHV5 1058 aa10.72□□□□□ -0.69
LSM2-213ENST00000491421 PLBD2Q8NHP8 589 aa10.72□□□□□ -0.69
LSM2-213ENST00000491421 CRAMP1Q96RY5 1269 aa10.72□□□□□ -0.69
LSM2-213ENST00000491421 HYPKQ9NX55 129 aa10.72□□□□□ -0.69
LSM2-213ENST00000491421 TRMT112Q9UI30 125 aaKnown RBP10.72□□□□□ -0.69
LSM2-213ENST00000491421 NUP98P52948 1817 aa10.72□□□□□ -0.69
LSM2-213ENST00000491421 POTECB2RU33 542 aa10.71□□□□□ -0.69
LSM2-213ENST00000491421 PPEF1O14829 653 aaPredicted RBP10.71□□□□□ -0.69
LSM2-213ENST00000491421 IARSP41252 1262 aaKnown RBP10.71□□□□□ -0.69
LSM2-213ENST00000491421 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
LSM2-213ENST00000491421 SLC10A5Q5PT55 438 aa10.71□□□□□ -0.69
LSM2-213ENST00000491421 ANKRD13DQ6ZTN6 518 aa10.71□□□□□ -0.69
LSM2-213ENST00000491421 SYNE4Q8N205 404 aa10.71□□□□□ -0.69
LSM2-213ENST00000491421 PSMD1Q99460 953 aa10.71□□□□□ -0.69
LSM2-213ENST00000491421 SH3TC1Q8TE82 1336 aa10.7□□□□□ -0.7
LSM2-213ENST00000491421 ZNF541Q9H0D2 1346 aa10.7□□□□□ -0.7
LSM2-213ENST00000491421 ELL2O00472 640 aaPredicted RBP10.7□□□□□ -0.7
LSM2-213ENST00000491421 TCERG1O14776 1098 aaKnown RBP10.7□□□□□ -0.7
LSM2-213ENST00000491421 ANP32CO43423 234 aa10.7□□□□□ -0.7
LSM2-213ENST00000491421 HCLS1P14317 486 aaPredicted RBP10.7□□□□□ -0.7
LSM2-213ENST00000491421 ZNF428Q96B54 188 aa10.7□□□□□ -0.7
LSM2-213ENST00000491421 TMX4Q9H1E5 349 aaPredicted RBP10.7□□□□□ -0.7
LSM2-213ENST00000491421 CACNA1SQ13698 1873 aa10.7□□□□□ -0.7
LSM2-213ENST00000491421 WDR90Q96KV7 1748 aa10.7□□□□□ -0.7
LSM2-213ENST00000491421 SNED1Q8TER0 1413 aa10.69□□□□□ -0.7
LSM2-213ENST00000491421 ABCC4O15439 1325 aa10.69□□□□□ -0.7
LSM2-213ENST00000491421 IQCA1LA6NCM1 817 aa10.69□□□□□ -0.7
LSM2-213ENST00000491421 HTRA3P83110 453 aa10.69□□□□□ -0.7
LSM2-213ENST00000491421 GOLGA2Q08379 1002 aa10.69□□□□□ -0.7
LSM2-213ENST00000491421 SLC51AQ86UW1 340 aa10.69□□□□□ -0.7
LSM2-213ENST00000491421 JDP2Q8WYK2 163 aa10.69□□□□□ -0.7
LSM2-213ENST00000491421 L3MBTL3Q96JM7 780 aaPredicted RBP10.69□□□□□ -0.7
LSM2-213ENST00000491421 MRS2Q9HD23 443 aa10.69□□□□□ -0.7
LSM2-213ENST00000491421 ATP5J2-PTCD1G3V325 749 aa10.68□□□□□ -0.7
LSM2-213ENST00000491421 FZD9O00144 591 aa10.68□□□□□ -0.7
LSM2-213ENST00000491421 DDX46Q7L014 1031 aaKnown RBP10.68□□□□□ -0.7
LSM2-213ENST00000491421 RIC3Q7Z5B4 369 aa10.68□□□□□ -0.7
LSM2-213ENST00000491421 DNAJC5GQ8N7S2 189 aa10.68□□□□□ -0.7
LSM2-213ENST00000491421 C8orf58Q8NAV2 365 aa10.68□□□□□ -0.7
LSM2-213ENST00000491421 ISCA1Q9BUE6 129 aa10.68□□□□□ -0.7
LSM2-213ENST00000491421 CHMP4AQ9BY43 222 aa10.68□□□□□ -0.7
LSM2-213ENST00000491421 ATP6V0A2Q9Y487 856 aa10.68□□□□□ -0.7
LSM2-213ENST00000491421 BBOX1O75936 387 aa10.67□□□□□ -0.7
LSM2-213ENST00000491421 CCDC27Q2M243 656 aa10.67□□□□□ -0.7
LSM2-213ENST00000491421 CCDC30Q5VVM6 783 aa10.67□□□□□ -0.7
LSM2-213ENST00000491421 CHADLQ6NUI6 762 aa10.67□□□□□ -0.7
LSM2-213ENST00000491421 WWC1Q8IX03 1113 aa10.67□□□□□ -0.7
LSM2-213ENST00000491421 GPC2Q8N158 579 aa10.67□□□□□ -0.7
LSM2-213ENST00000491421 LARGE2Q8N3Y3 721 aa10.67□□□□□ -0.7
LSM2-213ENST00000491421 TSR2Q969E8 191 aaKnown RBP10.67□□□□□ -0.7
LSM2-213ENST00000491421 FAM89AQ96GI7 184 aa10.67□□□□□ -0.7
LSM2-213ENST00000491421 TAF1DQ9H5J8 278 aaPredicted RBP10.67□□□□□ -0.7
LSM2-213ENST00000491421 PHAXQ9H814 394 aaKnown RBP10.67□□□□□ -0.7
LSM2-213ENST00000491421 POTEIP0CG38 1075 aa10.66□□□□□ -0.7
LSM2-213ENST00000491421 POTEJP0CG39 1038 aa10.66□□□□□ -0.7
LSM2-213ENST00000491421 EIF6P56537 245 aaKnown RBP10.66□□□□□ -0.7
LSM2-213ENST00000491421 TRIM28Q13263 835 aaKnown RBP10.66□□□□□ -0.7
LSM2-213ENST00000491421 GRAPQ13588 217 aa10.66□□□□□ -0.7
LSM2-213ENST00000491421 RTL5Q5HYW3 569 aaPredicted RBP10.66□□□□□ -0.7
LSM2-213ENST00000491421 DPP8Q6V1X1 898 aaPredicted RBP10.66□□□□□ -0.7
LSM2-213ENST00000491421 TSPYL6Q8N831 410 aa10.66□□□□□ -0.7
LSM2-213ENST00000491421 GRAPLQ8TC17 118 aaPredicted RBP10.66□□□□□ -0.7
LSM2-213ENST00000491421 DAXXQ9UER7 740 aaPredicted RBP10.66□□□□□ -0.7
LSM2-213ENST00000491421 HACL1Q9UJ83 578 aa10.66□□□□□ -0.7
LSM2-213ENST00000491421 DICER1Q9UPY3 1922 aaKnown RBP10.66□□□□□ -0.7
LSM2-213ENST00000491421 CCDC88AQ3V6T2 1871 aa10.66□□□□□ -0.7
LSM2-213ENST00000491421 ANKRD36CQ5JPF3 1778 aa10.65□□□□□ -0.7
LSM2-213ENST00000491421 PPIP5K2O43314 1243 aa10.65□□□□□ -0.7
LSM2-213ENST00000491421 DDX58O95786 925 aaKnown RBP10.65□□□□□ -0.7
LSM2-213ENST00000491421 AOC3Q16853 763 aa10.65□□□□□ -0.7
LSM2-213ENST00000491421 EAPPQ56P03 285 aaPredicted RBP10.65□□□□□ -0.7
LSM2-213ENST00000491421 LDHDQ86WU2 507 aa10.65□□□□□ -0.7
LSM2-213ENST00000491421 SP8Q8IXZ3 490 aa10.65□□□□□ -0.7
LSM2-213ENST00000491421 NIM1KQ8IY84 436 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms